Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3IVN:A20:A21
Extra
PDB:
ATOM 1 O3' A A 19 3.754 12.979 5.981 1.00 38.13 O
ATOM 2 P U A 20 4.200 14.335 5.248 1.00 40.12 P
ATOM 3 OP1 U A 20 3.646 14.290 3.871 1.00 39.61 O
ATOM 4 OP2 U A 20 5.663 14.502 5.446 1.00 38.82 O
ATOM 5 O5' U A 20 3.395 15.371 6.138 1.00 40.07 O
ATOM 6 C5' U A 20 2.079 15.008 6.550 1.00 39.77 C
ATOM 7 C4' U A 20 1.784 15.503 7.941 1.00 39.47 C
ATOM 8 O4' U A 20 2.763 14.939 8.864 1.00 38.57 O
ATOM 9 C3' U A 20 1.867 17.017 8.095 1.00 39.97 C
ATOM 10 O3' U A 20 0.901 17.452 9.041 1.00 40.16 O
ATOM 11 C2' U A 20 3.277 17.216 8.654 1.00 38.91 C
ATOM 12 O2' U A 20 3.471 18.394 9.395 1.00 39.36 O
ATOM 13 C1' U A 20 3.429 15.993 9.534 1.00 38.67 C
ATOM 14 N1 U A 20 4.827 15.639 9.759 1.00 39.33 N
ATOM 15 C2 U A 20 5.340 15.860 11.021 1.00 39.24 C
ATOM 16 O2 U A 20 4.672 16.318 11.929 1.00 38.88 O
ATOM 17 N3 U A 20 6.660 15.522 11.179 1.00 39.48 N
ATOM 18 C4 U A 20 7.501 15.000 10.218 1.00 39.41 C
ATOM 19 O4 U A 20 8.669 14.744 10.511 1.00 39.18 O
ATOM 20 C5 U A 20 6.894 14.805 8.936 1.00 39.44 C
ATOM 21 C6 U A 20 5.610 15.127 8.753 1.00 39.24 C
ATOM 22 P A A 21 0.443 18.988 9.007 1.00 40.45 P
ATOM 23 OP1 A A 21 0.563 19.417 7.591 1.00 40.42 O
ATOM 24 OP2 A A 21 1.230 19.686 10.047 1.00 40.74 O
ATOM 25 O5' A A 21 -1.077 18.933 9.430 1.00 39.23 O
TER
ATOM 1 O3' U B 20 0.901 17.452 9.041 1.00 40.16 O
ATOM 2 P A B 21 0.443 18.988 9.007 1.00 40.45 P
ATOM 3 OP1 A B 21 0.563 19.417 7.591 1.00 40.42 O
ATOM 4 OP2 A B 21 1.230 19.686 10.047 1.00 40.74 O
ATOM 5 O5' A B 21 -1.077 18.933 9.430 1.00 39.23 O
ATOM 6 C5' A B 21 -1.595 17.912 10.273 1.00 40.26 C
ATOM 7 C4' A B 21 -2.286 18.513 11.474 1.00 39.66 C
ATOM 8 O4' A B 21 -1.334 18.930 12.495 1.00 39.56 O
ATOM 9 C3' A B 21 -3.133 19.731 11.127 1.00 40.09 C
ATOM 10 O3' A B 21 -4.338 19.707 11.866 1.00 41.10 O
ATOM 11 C2' A B 21 -2.222 20.892 11.566 1.00 40.87 C
ATOM 12 O2' A B 21 -2.908 22.081 11.873 1.00 40.30 O
ATOM 13 C1' A B 21 -1.522 20.307 12.787 1.00 39.45 C
ATOM 14 N9 A B 21 -0.192 20.854 13.097 1.00 38.60 N
ATOM 15 C8 A B 21 1.017 20.416 12.617 1.00 38.67 C
ATOM 16 N7 A B 21 2.051 21.081 13.068 1.00 39.00 N
ATOM 17 C5 A B 21 1.492 22.025 13.915 1.00 38.76 C
ATOM 18 C6 A B 21 2.063 23.041 14.706 1.00 38.49 C
ATOM 19 N6 A B 21 3.374 23.286 14.778 1.00 38.80 N
ATOM 20 N1 A B 21 1.228 23.809 15.434 1.00 38.80 N
ATOM 21 C2 A B 21 -0.087 23.567 15.365 1.00 39.02 C
ATOM 22 N3 A B 21 -0.744 22.646 14.660 1.00 38.67 N
ATOM 23 C4 A B 21 0.112 21.895 13.948 1.00 38.59 C
ATOM 24 P U B 22 -5.669 19.338 11.042 1.00 44.06 P
ATOM 25 OP1 U B 22 -5.315 19.588 9.622 1.00 41.83 O
ATOM 26 OP2 U B 22 -6.790 20.088 11.663 1.00 44.79 O
ATOM 27 O5' U B 22 -5.870 17.779 11.288 1.00 43.85 O
TER
ATOM 2 P U A 20 4.200 14.335 5.248 1.00 40.12 P
ATOM 3 OP1 U A 20 3.646 14.290 3.871 1.00 39.61 O
ATOM 4 OP2 U A 20 5.663 14.502 5.446 1.00 38.82 O
ATOM 5 O5' U A 20 3.395 15.371 6.138 1.00 40.07 O
ATOM 6 C5' U A 20 2.079 15.008 6.550 1.00 39.77 C
ATOM 7 C4' U A 20 1.784 15.503 7.941 1.00 39.47 C
ATOM 8 O4' U A 20 2.763 14.939 8.864 1.00 38.57 O
ATOM 9 C3' U A 20 1.867 17.017 8.095 1.00 39.97 C
ATOM 10 O3' U A 20 0.901 17.452 9.041 1.00 40.16 O
ATOM 11 C2' U A 20 3.277 17.216 8.654 1.00 38.91 C
ATOM 12 O2' U A 20 3.471 18.394 9.395 1.00 39.36 O
ATOM 13 C1' U A 20 3.429 15.993 9.534 1.00 38.67 C
ATOM 14 N1 U A 20 4.827 15.639 9.759 1.00 39.33 N
ATOM 15 C2 U A 20 5.340 15.860 11.021 1.00 39.24 C
ATOM 16 O2 U A 20 4.672 16.318 11.929 1.00 38.88 O
ATOM 17 N3 U A 20 6.660 15.522 11.179 1.00 39.48 N
ATOM 18 C4 U A 20 7.501 15.000 10.218 1.00 39.41 C
ATOM 19 O4 U A 20 8.669 14.744 10.511 1.00 39.18 O
ATOM 20 C5 U A 20 6.894 14.805 8.936 1.00 39.44 C
ATOM 21 C6 U A 20 5.610 15.127 8.753 1.00 39.24 C
ATOM 22 P A A 21 0.443 18.988 9.007 1.00 40.45 P
ATOM 23 OP1 A A 21 0.563 19.417 7.591 1.00 40.42 O
ATOM 24 OP2 A A 21 1.230 19.686 10.047 1.00 40.74 O
ATOM 25 O5' A A 21 -1.077 18.933 9.430 1.00 39.23 O
TER
ATOM 1 O3' U B 20 0.901 17.452 9.041 1.00 40.16 O
ATOM 2 P A B 21 0.443 18.988 9.007 1.00 40.45 P
ATOM 3 OP1 A B 21 0.563 19.417 7.591 1.00 40.42 O
ATOM 4 OP2 A B 21 1.230 19.686 10.047 1.00 40.74 O
ATOM 5 O5' A B 21 -1.077 18.933 9.430 1.00 39.23 O
ATOM 6 C5' A B 21 -1.595 17.912 10.273 1.00 40.26 C
ATOM 7 C4' A B 21 -2.286 18.513 11.474 1.00 39.66 C
ATOM 8 O4' A B 21 -1.334 18.930 12.495 1.00 39.56 O
ATOM 9 C3' A B 21 -3.133 19.731 11.127 1.00 40.09 C
ATOM 10 O3' A B 21 -4.338 19.707 11.866 1.00 41.10 O
ATOM 11 C2' A B 21 -2.222 20.892 11.566 1.00 40.87 C
ATOM 12 O2' A B 21 -2.908 22.081 11.873 1.00 40.30 O
ATOM 13 C1' A B 21 -1.522 20.307 12.787 1.00 39.45 C
ATOM 14 N9 A B 21 -0.192 20.854 13.097 1.00 38.60 N
ATOM 15 C8 A B 21 1.017 20.416 12.617 1.00 38.67 C
ATOM 16 N7 A B 21 2.051 21.081 13.068 1.00 39.00 N
ATOM 17 C5 A B 21 1.492 22.025 13.915 1.00 38.76 C
ATOM 18 C6 A B 21 2.063 23.041 14.706 1.00 38.49 C
ATOM 19 N6 A B 21 3.374 23.286 14.778 1.00 38.80 N
ATOM 20 N1 A B 21 1.228 23.809 15.434 1.00 38.80 N
ATOM 21 C2 A B 21 -0.087 23.567 15.365 1.00 39.02 C
ATOM 22 N3 A B 21 -0.744 22.646 14.660 1.00 38.67 N
ATOM 23 C4 A B 21 0.112 21.895 13.948 1.00 38.59 C
ATOM 24 P U B 22 -5.669 19.338 11.042 1.00 44.06 P
ATOM 25 OP1 U B 22 -5.315 19.588 9.622 1.00 41.83 O
ATOM 26 OP2 U B 22 -6.790 20.088 11.663 1.00 44.79 O
ATOM 27 O5' U B 22 -5.870 17.779 11.288 1.00 43.85 O
TER
Atoms:
C4: (7.501,15.000,10.218)
N3: (6.660,15.522,11.179)
OP1: (3.646,14.290,3.871)
OP2: (5.663,14.502,5.446)
C2: (5.340,15.860,11.021)
C1': (3.429,15.993,9.534)
C3': (1.867,17.017,8.095)
O5': (3.395,15.371,6.138)
O4': (2.763,14.939,8.864)
C5': (2.079,15.008,6.550)
P: (4.200,14.335,5.248)
C4': (1.784,15.503,7.941)
C2': (3.277,17.216,8.654)
O2': (3.471,18.394,9.395)
N1: (4.827,15.639,9.759)
O4: (8.669,14.744,10.511)
O2: (4.672,16.318,11.929)
C6: (5.610,15.127,8.753)
C5: (6.894,14.805,8.936)
O3': (0.901,17.452,9.041)
N3: (6.660,15.522,11.179)
OP1: (3.646,14.290,3.871)
OP2: (5.663,14.502,5.446)
C2: (5.340,15.860,11.021)
C1': (3.429,15.993,9.534)
C3': (1.867,17.017,8.095)
O5': (3.395,15.371,6.138)
O4': (2.763,14.939,8.864)
C5': (2.079,15.008,6.550)
P: (4.200,14.335,5.248)
C4': (1.784,15.503,7.941)
C2': (3.277,17.216,8.654)
O2': (3.471,18.394,9.395)
N1: (4.827,15.639,9.759)
O4: (8.669,14.744,10.511)
O2: (4.672,16.318,11.929)
C6: (5.610,15.127,8.753)
C5: (6.894,14.805,8.936)
O3': (0.901,17.452,9.041)
OP1: (0.563,19.417,7.591)
OP2: (1.230,19.686,10.047)
C3': (-3.133,19.731,11.127)
C1': (-1.522,20.307,12.787)
C5': (-1.595,17.912,10.273)
O4': (-1.334,18.930,12.495)
C8: (1.017,20.416,12.617)
O2': (-2.908,22.081,11.873)
C6: (2.063,23.041,14.706)
C5: (1.492,22.025,13.915)
C4: (0.112,21.895,13.948)
P: (0.443,18.988,9.007)
C4': (-2.286,18.513,11.474)
C2': (-2.222,20.892,11.566)
C2: (-0.087,23.567,15.365)
N1: (1.228,23.809,15.434)
N3: (-0.744,22.646,14.660)
N6: (3.374,23.286,14.778)
N7: (2.051,21.081,13.068)
N9: (-0.192,20.854,13.097)
O5': (-1.077,18.933,9.430)
O3': (-4.338,19.707,11.866)
OP2: (1.230,19.686,10.047)
C3': (-3.133,19.731,11.127)
C1': (-1.522,20.307,12.787)
C5': (-1.595,17.912,10.273)
O4': (-1.334,18.930,12.495)
C8: (1.017,20.416,12.617)
O2': (-2.908,22.081,11.873)
C6: (2.063,23.041,14.706)
C5: (1.492,22.025,13.915)
C4: (0.112,21.895,13.948)
P: (0.443,18.988,9.007)
C4': (-2.286,18.513,11.474)
C2': (-2.222,20.892,11.566)
C2: (-0.087,23.567,15.365)
N1: (1.228,23.809,15.434)
N3: (-0.744,22.646,14.660)
N6: (3.374,23.286,14.778)
N7: (2.051,21.081,13.068)
N9: (-0.192,20.854,13.097)
O5': (-1.077,18.933,9.430)
O3': (-4.338,19.707,11.866)
Image (generated by PyMOL):