Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1N8R:A562:A571
Extra
PDB:
ATOM 1 O3' A A 561 -12.971 89.317 130.100 1.00 80.74 O
ATOM 2 P C A 562 -11.942 88.977 131.292 1.00 80.55 P
ATOM 3 OP1 C A 562 -12.755 88.623 132.474 1.00 80.76 O
ATOM 4 OP2 C A 562 -10.946 90.069 131.394 1.00 79.81 O
ATOM 5 O5' C A 562 -11.192 87.663 130.785 1.00 79.77 O
ATOM 6 C5' C A 562 -11.943 86.483 130.433 1.00 79.54 C
ATOM 7 C4' C A 562 -11.041 85.420 129.839 1.00 80.72 C
ATOM 8 O4' C A 562 -10.575 85.815 128.518 1.00 81.36 O
ATOM 9 C3' C A 562 -9.757 85.106 130.585 1.00 81.00 C
ATOM 10 O3' C A 562 -9.921 84.297 131.729 1.00 81.56 O
ATOM 11 C2' C A 562 -8.938 84.424 129.505 1.00 81.55 C
ATOM 12 O2' C A 562 -9.359 83.095 129.263 1.00 80.21 O
ATOM 13 C1' C A 562 -9.250 85.331 128.315 1.00 81.83 C
ATOM 14 N1 C A 562 -8.325 86.485 128.302 1.00 82.41 N
ATOM 15 C2 C A 562 -7.137 86.408 127.557 1.00 82.32 C
ATOM 16 O2 C A 562 -6.895 85.383 126.904 1.00 81.56 O
ATOM 17 N3 C A 562 -6.282 87.456 127.575 1.00 82.14 N
ATOM 18 C4 C A 562 -6.576 88.547 128.289 1.00 82.91 C
ATOM 19 N4 C A 562 -5.707 89.557 128.279 1.00 83.79 N
ATOM 20 C5 C A 562 -7.774 88.653 129.045 1.00 82.76 C
ATOM 21 C6 C A 562 -8.611 87.614 129.022 1.00 82.74 C
ATOM 22 P G A 563 -8.839 84.392 132.910 1.00 81.37 P
ATOM 23 OP1 G A 563 -9.304 83.544 134.025 1.00 82.59 O
ATOM 24 OP2 G A 563 -8.562 85.833 133.155 1.00 80.98 O
ATOM 25 O5' G A 563 -7.550 83.702 132.281 1.00 80.71 O
TER
ATOM 1 O3' C B 570 4.033 88.411 122.253 1.00 55.22 O
ATOM 2 P G B 571 2.763 88.253 121.283 1.00 56.48 P
ATOM 3 OP1 G B 571 3.299 87.919 119.941 1.00 56.65 O
ATOM 4 OP2 G B 571 1.881 89.435 121.445 1.00 54.59 O
ATOM 5 O5' G B 571 2.000 86.971 121.847 1.00 59.43 O
ATOM 6 C5' G B 571 2.623 85.668 121.826 1.00 62.97 C
ATOM 7 C4' G B 571 1.680 84.626 122.378 1.00 64.79 C
ATOM 8 O4' G B 571 1.408 84.889 123.778 1.00 66.12 O
ATOM 9 C3' G B 571 0.309 84.627 121.745 1.00 65.09 C
ATOM 10 O3' G B 571 0.327 83.940 120.511 1.00 64.83 O
ATOM 11 C2' G B 571 -0.548 83.954 122.805 1.00 66.50 C
ATOM 12 O2' G B 571 -0.438 82.545 122.812 1.00 66.60 O
ATOM 13 C1' G B 571 0.072 84.519 124.081 1.00 67.53 C
ATOM 14 N9 G B 571 -0.630 85.691 124.591 1.00 70.01 N
ATOM 15 C8 G B 571 -0.191 86.992 124.597 1.00 70.82 C
ATOM 16 N7 G B 571 -1.053 87.822 125.117 1.00 72.18 N
ATOM 17 C5 G B 571 -2.127 87.021 125.477 1.00 73.60 C
ATOM 18 C6 G B 571 -3.373 87.363 126.076 1.00 75.15 C
ATOM 19 O6 G B 571 -3.783 88.477 126.418 1.00 76.08 O
ATOM 20 N1 G B 571 -4.180 86.241 126.261 1.00 75.24 N
ATOM 21 C2 G B 571 -3.837 84.953 125.915 1.00 75.79 C
ATOM 22 N2 G B 571 -4.759 84.006 126.171 1.00 75.67 N
ATOM 23 N3 G B 571 -2.676 84.621 125.356 1.00 74.75 N
ATOM 24 C4 G B 571 -1.878 85.700 125.165 1.00 72.78 C
ATOM 25 P U B 572 -0.721 84.349 119.377 1.00 65.35 P
ATOM 26 OP1 U B 572 -0.402 83.596 118.139 1.00 65.94 O
ATOM 27 OP2 U B 572 -0.782 85.833 119.346 1.00 64.96 O
ATOM 28 O5' U B 572 -2.113 83.830 119.946 1.00 66.12 O
TER
ATOM 2 P C A 562 -11.942 88.977 131.292 1.00 80.55 P
ATOM 3 OP1 C A 562 -12.755 88.623 132.474 1.00 80.76 O
ATOM 4 OP2 C A 562 -10.946 90.069 131.394 1.00 79.81 O
ATOM 5 O5' C A 562 -11.192 87.663 130.785 1.00 79.77 O
ATOM 6 C5' C A 562 -11.943 86.483 130.433 1.00 79.54 C
ATOM 7 C4' C A 562 -11.041 85.420 129.839 1.00 80.72 C
ATOM 8 O4' C A 562 -10.575 85.815 128.518 1.00 81.36 O
ATOM 9 C3' C A 562 -9.757 85.106 130.585 1.00 81.00 C
ATOM 10 O3' C A 562 -9.921 84.297 131.729 1.00 81.56 O
ATOM 11 C2' C A 562 -8.938 84.424 129.505 1.00 81.55 C
ATOM 12 O2' C A 562 -9.359 83.095 129.263 1.00 80.21 O
ATOM 13 C1' C A 562 -9.250 85.331 128.315 1.00 81.83 C
ATOM 14 N1 C A 562 -8.325 86.485 128.302 1.00 82.41 N
ATOM 15 C2 C A 562 -7.137 86.408 127.557 1.00 82.32 C
ATOM 16 O2 C A 562 -6.895 85.383 126.904 1.00 81.56 O
ATOM 17 N3 C A 562 -6.282 87.456 127.575 1.00 82.14 N
ATOM 18 C4 C A 562 -6.576 88.547 128.289 1.00 82.91 C
ATOM 19 N4 C A 562 -5.707 89.557 128.279 1.00 83.79 N
ATOM 20 C5 C A 562 -7.774 88.653 129.045 1.00 82.76 C
ATOM 21 C6 C A 562 -8.611 87.614 129.022 1.00 82.74 C
ATOM 22 P G A 563 -8.839 84.392 132.910 1.00 81.37 P
ATOM 23 OP1 G A 563 -9.304 83.544 134.025 1.00 82.59 O
ATOM 24 OP2 G A 563 -8.562 85.833 133.155 1.00 80.98 O
ATOM 25 O5' G A 563 -7.550 83.702 132.281 1.00 80.71 O
TER
ATOM 1 O3' C B 570 4.033 88.411 122.253 1.00 55.22 O
ATOM 2 P G B 571 2.763 88.253 121.283 1.00 56.48 P
ATOM 3 OP1 G B 571 3.299 87.919 119.941 1.00 56.65 O
ATOM 4 OP2 G B 571 1.881 89.435 121.445 1.00 54.59 O
ATOM 5 O5' G B 571 2.000 86.971 121.847 1.00 59.43 O
ATOM 6 C5' G B 571 2.623 85.668 121.826 1.00 62.97 C
ATOM 7 C4' G B 571 1.680 84.626 122.378 1.00 64.79 C
ATOM 8 O4' G B 571 1.408 84.889 123.778 1.00 66.12 O
ATOM 9 C3' G B 571 0.309 84.627 121.745 1.00 65.09 C
ATOM 10 O3' G B 571 0.327 83.940 120.511 1.00 64.83 O
ATOM 11 C2' G B 571 -0.548 83.954 122.805 1.00 66.50 C
ATOM 12 O2' G B 571 -0.438 82.545 122.812 1.00 66.60 O
ATOM 13 C1' G B 571 0.072 84.519 124.081 1.00 67.53 C
ATOM 14 N9 G B 571 -0.630 85.691 124.591 1.00 70.01 N
ATOM 15 C8 G B 571 -0.191 86.992 124.597 1.00 70.82 C
ATOM 16 N7 G B 571 -1.053 87.822 125.117 1.00 72.18 N
ATOM 17 C5 G B 571 -2.127 87.021 125.477 1.00 73.60 C
ATOM 18 C6 G B 571 -3.373 87.363 126.076 1.00 75.15 C
ATOM 19 O6 G B 571 -3.783 88.477 126.418 1.00 76.08 O
ATOM 20 N1 G B 571 -4.180 86.241 126.261 1.00 75.24 N
ATOM 21 C2 G B 571 -3.837 84.953 125.915 1.00 75.79 C
ATOM 22 N2 G B 571 -4.759 84.006 126.171 1.00 75.67 N
ATOM 23 N3 G B 571 -2.676 84.621 125.356 1.00 74.75 N
ATOM 24 C4 G B 571 -1.878 85.700 125.165 1.00 72.78 C
ATOM 25 P U B 572 -0.721 84.349 119.377 1.00 65.35 P
ATOM 26 OP1 U B 572 -0.402 83.596 118.139 1.00 65.94 O
ATOM 27 OP2 U B 572 -0.782 85.833 119.346 1.00 64.96 O
ATOM 28 O5' U B 572 -2.113 83.830 119.946 1.00 66.12 O
TER
Atoms:
C2: (-7.137,86.408,127.557)
OP1: (-12.755,88.623,132.474)
OP2: (-10.946,90.069,131.394)
C4: (-6.576,88.547,128.289)
O5': (-11.192,87.663,130.785)
C3': (-9.757,85.106,130.585)
C1': (-9.250,85.331,128.315)
O4': (-10.575,85.815,128.518)
C5': (-11.943,86.483,130.433)
P: (-11.942,88.977,131.292)
O2: (-6.895,85.383,126.904)
C4': (-11.041,85.420,129.839)
C2': (-8.938,84.424,129.505)
O2': (-9.359,83.095,129.263)
N1: (-8.325,86.485,128.302)
N3: (-6.282,87.456,127.575)
N4: (-5.707,89.557,128.279)
C6: (-8.611,87.614,129.022)
C5: (-7.774,88.653,129.045)
O3': (-9.921,84.297,131.729)
OP1: (-12.755,88.623,132.474)
OP2: (-10.946,90.069,131.394)
C4: (-6.576,88.547,128.289)
O5': (-11.192,87.663,130.785)
C3': (-9.757,85.106,130.585)
C1': (-9.250,85.331,128.315)
O4': (-10.575,85.815,128.518)
C5': (-11.943,86.483,130.433)
P: (-11.942,88.977,131.292)
O2: (-6.895,85.383,126.904)
C4': (-11.041,85.420,129.839)
C2': (-8.938,84.424,129.505)
O2': (-9.359,83.095,129.263)
N1: (-8.325,86.485,128.302)
N3: (-6.282,87.456,127.575)
N4: (-5.707,89.557,128.279)
C6: (-8.611,87.614,129.022)
C5: (-7.774,88.653,129.045)
O3': (-9.921,84.297,131.729)
OP1: (3.299,87.919,119.941)
OP2: (1.881,89.435,121.445)
C3': (0.309,84.627,121.745)
C1': (0.072,84.519,124.081)
C5': (2.623,85.668,121.826)
O6: (-3.783,88.477,126.418)
O4': (1.408,84.889,123.778)
C8: (-0.191,86.992,124.597)
C2: (-3.837,84.953,125.915)
C6: (-3.373,87.363,126.076)
C5: (-2.127,87.021,125.477)
C4: (-1.878,85.700,125.165)
P: (2.763,88.253,121.283)
C4': (1.680,84.626,122.378)
C2': (-0.548,83.954,122.805)
O2': (-0.438,82.545,122.812)
N1: (-4.180,86.241,126.261)
N2: (-4.759,84.006,126.171)
N3: (-2.676,84.621,125.356)
N7: (-1.053,87.822,125.117)
N9: (-0.630,85.691,124.591)
O5': (2.000,86.971,121.847)
O3': (0.327,83.940,120.511)
OP2: (1.881,89.435,121.445)
C3': (0.309,84.627,121.745)
C1': (0.072,84.519,124.081)
C5': (2.623,85.668,121.826)
O6: (-3.783,88.477,126.418)
O4': (1.408,84.889,123.778)
C8: (-0.191,86.992,124.597)
C2: (-3.837,84.953,125.915)
C6: (-3.373,87.363,126.076)
C5: (-2.127,87.021,125.477)
C4: (-1.878,85.700,125.165)
P: (2.763,88.253,121.283)
C4': (1.680,84.626,122.378)
C2': (-0.548,83.954,122.805)
O2': (-0.438,82.545,122.812)
N1: (-4.180,86.241,126.261)
N2: (-4.759,84.006,126.171)
N3: (-2.676,84.621,125.356)
N7: (-1.053,87.822,125.117)
N9: (-0.630,85.691,124.591)
O5': (2.000,86.971,121.847)
O3': (0.327,83.940,120.511)
Image (generated by PyMOL):