Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1DDY:A8:A9
Extra
PDB:
ATOM 1 O3' G A 7 30.959 -21.605 9.529 1.00 25.47 O
ATOM 2 P U A 8 29.546 -20.849 9.471 1.00 26.65 P
ATOM 3 OP1 U A 8 28.488 -21.885 9.554 1.00 28.43 O
ATOM 4 OP2 U A 8 29.572 -19.917 8.322 1.00 26.08 O
ATOM 5 O5' U A 8 29.519 -20.007 10.820 1.00 21.88 O
ATOM 6 C5' U A 8 29.297 -20.667 12.053 1.00 21.61 C
ATOM 7 C4' U A 8 29.104 -19.666 13.148 1.00 22.08 C
ATOM 8 O4' U A 8 30.340 -18.949 13.353 1.00 22.03 O
ATOM 9 C3' U A 8 28.083 -18.574 12.875 1.00 22.92 C
ATOM 10 O3' U A 8 26.753 -19.039 13.108 1.00 25.35 O
ATOM 11 C2' U A 8 28.522 -17.480 13.843 1.00 23.23 C
ATOM 12 O2' U A 8 28.072 -17.645 15.174 1.00 23.36 O
ATOM 13 C1' U A 8 30.048 -17.636 13.802 1.00 22.06 C
ATOM 14 N1 U A 8 30.663 -16.679 12.877 1.00 19.61 N
ATOM 15 C2 U A 8 31.086 -15.470 13.406 1.00 20.24 C
ATOM 16 O2 U A 8 31.054 -15.216 14.604 1.00 19.96 O
ATOM 17 N3 U A 8 31.551 -14.569 12.485 1.00 21.43 N
ATOM 18 C4 U A 8 31.649 -14.752 11.123 1.00 22.41 C
ATOM 19 O4 U A 8 31.952 -13.796 10.414 1.00 23.52 O
ATOM 20 C5 U A 8 31.249 -16.053 10.660 1.00 21.75 C
ATOM 21 C6 U A 8 30.782 -16.952 11.535 1.00 19.88 C
ATOM 22 P G A 9 25.537 -18.479 12.214 1.00 28.33 P
ATOM 23 OP1 G A 9 24.311 -19.211 12.615 1.00 27.98 O
ATOM 24 OP2 G A 9 25.945 -18.477 10.783 1.00 28.77 O
ATOM 25 O5' G A 9 25.403 -16.969 12.706 1.00 28.29 O
TER
ATOM 1 O3' U B 8 26.753 -19.039 13.108 1.00 25.35 O
ATOM 2 P G B 9 25.537 -18.479 12.214 1.00 28.33 P
ATOM 3 OP1 G B 9 24.311 -19.211 12.615 1.00 27.98 O
ATOM 4 OP2 G B 9 25.945 -18.477 10.783 1.00 28.77 O
ATOM 5 O5' G B 9 25.403 -16.969 12.706 1.00 28.29 O
ATOM 6 C5' G B 9 25.157 -16.679 14.079 1.00 26.02 C
ATOM 7 C4' G B 9 24.215 -15.507 14.203 1.00 26.08 C
ATOM 8 O4' G B 9 24.908 -14.271 13.939 1.00 26.86 O
ATOM 9 C3' G B 9 23.065 -15.481 13.211 1.00 25.57 C
ATOM 10 O3' G B 9 22.001 -16.283 13.674 1.00 27.16 O
ATOM 11 C2' G B 9 22.627 -14.028 13.260 1.00 24.61 C
ATOM 12 O2' G B 9 21.733 -13.837 14.331 1.00 24.66 O
ATOM 13 C1' G B 9 23.956 -13.306 13.535 1.00 24.74 C
ATOM 14 N9 G B 9 24.490 -12.548 12.409 1.00 22.71 N
ATOM 15 C8 G B 9 24.674 -12.971 11.117 1.00 21.72 C
ATOM 16 N7 G B 9 25.090 -12.024 10.323 1.00 21.83 N
ATOM 17 C5 G B 9 25.203 -10.918 11.149 1.00 22.90 C
ATOM 18 C6 G B 9 25.572 -9.585 10.852 1.00 26.48 C
ATOM 19 O6 G B 9 25.831 -9.084 9.747 1.00 29.71 O
ATOM 20 N1 G B 9 25.585 -8.792 11.999 1.00 24.96 N
ATOM 21 C2 G B 9 25.235 -9.222 13.259 1.00 22.72 C
ATOM 22 N2 G B 9 25.288 -8.313 14.244 1.00 21.91 N
ATOM 23 N3 G B 9 24.854 -10.452 13.533 1.00 21.87 N
ATOM 24 C4 G B 9 24.864 -11.238 12.442 1.00 21.23 C
ATOM 25 P C B 10 20.988 -16.932 12.628 1.00 31.03 P
ATOM 26 OP1 C B 10 19.902 -17.559 13.433 1.00 32.05 O
ATOM 27 OP2 C B 10 21.777 -17.753 11.666 1.00 27.22 O
ATOM 28 O5' C B 10 20.374 -15.684 11.855 1.00 32.60 O
TER
ATOM 2 P U A 8 29.546 -20.849 9.471 1.00 26.65 P
ATOM 3 OP1 U A 8 28.488 -21.885 9.554 1.00 28.43 O
ATOM 4 OP2 U A 8 29.572 -19.917 8.322 1.00 26.08 O
ATOM 5 O5' U A 8 29.519 -20.007 10.820 1.00 21.88 O
ATOM 6 C5' U A 8 29.297 -20.667 12.053 1.00 21.61 C
ATOM 7 C4' U A 8 29.104 -19.666 13.148 1.00 22.08 C
ATOM 8 O4' U A 8 30.340 -18.949 13.353 1.00 22.03 O
ATOM 9 C3' U A 8 28.083 -18.574 12.875 1.00 22.92 C
ATOM 10 O3' U A 8 26.753 -19.039 13.108 1.00 25.35 O
ATOM 11 C2' U A 8 28.522 -17.480 13.843 1.00 23.23 C
ATOM 12 O2' U A 8 28.072 -17.645 15.174 1.00 23.36 O
ATOM 13 C1' U A 8 30.048 -17.636 13.802 1.00 22.06 C
ATOM 14 N1 U A 8 30.663 -16.679 12.877 1.00 19.61 N
ATOM 15 C2 U A 8 31.086 -15.470 13.406 1.00 20.24 C
ATOM 16 O2 U A 8 31.054 -15.216 14.604 1.00 19.96 O
ATOM 17 N3 U A 8 31.551 -14.569 12.485 1.00 21.43 N
ATOM 18 C4 U A 8 31.649 -14.752 11.123 1.00 22.41 C
ATOM 19 O4 U A 8 31.952 -13.796 10.414 1.00 23.52 O
ATOM 20 C5 U A 8 31.249 -16.053 10.660 1.00 21.75 C
ATOM 21 C6 U A 8 30.782 -16.952 11.535 1.00 19.88 C
ATOM 22 P G A 9 25.537 -18.479 12.214 1.00 28.33 P
ATOM 23 OP1 G A 9 24.311 -19.211 12.615 1.00 27.98 O
ATOM 24 OP2 G A 9 25.945 -18.477 10.783 1.00 28.77 O
ATOM 25 O5' G A 9 25.403 -16.969 12.706 1.00 28.29 O
TER
ATOM 1 O3' U B 8 26.753 -19.039 13.108 1.00 25.35 O
ATOM 2 P G B 9 25.537 -18.479 12.214 1.00 28.33 P
ATOM 3 OP1 G B 9 24.311 -19.211 12.615 1.00 27.98 O
ATOM 4 OP2 G B 9 25.945 -18.477 10.783 1.00 28.77 O
ATOM 5 O5' G B 9 25.403 -16.969 12.706 1.00 28.29 O
ATOM 6 C5' G B 9 25.157 -16.679 14.079 1.00 26.02 C
ATOM 7 C4' G B 9 24.215 -15.507 14.203 1.00 26.08 C
ATOM 8 O4' G B 9 24.908 -14.271 13.939 1.00 26.86 O
ATOM 9 C3' G B 9 23.065 -15.481 13.211 1.00 25.57 C
ATOM 10 O3' G B 9 22.001 -16.283 13.674 1.00 27.16 O
ATOM 11 C2' G B 9 22.627 -14.028 13.260 1.00 24.61 C
ATOM 12 O2' G B 9 21.733 -13.837 14.331 1.00 24.66 O
ATOM 13 C1' G B 9 23.956 -13.306 13.535 1.00 24.74 C
ATOM 14 N9 G B 9 24.490 -12.548 12.409 1.00 22.71 N
ATOM 15 C8 G B 9 24.674 -12.971 11.117 1.00 21.72 C
ATOM 16 N7 G B 9 25.090 -12.024 10.323 1.00 21.83 N
ATOM 17 C5 G B 9 25.203 -10.918 11.149 1.00 22.90 C
ATOM 18 C6 G B 9 25.572 -9.585 10.852 1.00 26.48 C
ATOM 19 O6 G B 9 25.831 -9.084 9.747 1.00 29.71 O
ATOM 20 N1 G B 9 25.585 -8.792 11.999 1.00 24.96 N
ATOM 21 C2 G B 9 25.235 -9.222 13.259 1.00 22.72 C
ATOM 22 N2 G B 9 25.288 -8.313 14.244 1.00 21.91 N
ATOM 23 N3 G B 9 24.854 -10.452 13.533 1.00 21.87 N
ATOM 24 C4 G B 9 24.864 -11.238 12.442 1.00 21.23 C
ATOM 25 P C B 10 20.988 -16.932 12.628 1.00 31.03 P
ATOM 26 OP1 C B 10 19.902 -17.559 13.433 1.00 32.05 O
ATOM 27 OP2 C B 10 21.777 -17.753 11.666 1.00 27.22 O
ATOM 28 O5' C B 10 20.374 -15.684 11.855 1.00 32.60 O
TER
Atoms:
C4: (31.649,-14.752,11.123)
N3: (31.551,-14.569,12.485)
OP1: (28.488,-21.885,9.554)
OP2: (29.572,-19.917,8.322)
C2: (31.086,-15.470,13.406)
C1': (30.048,-17.636,13.802)
C3': (28.083,-18.574,12.875)
O5': (29.519,-20.007,10.820)
O4': (30.340,-18.949,13.353)
C5': (29.297,-20.667,12.053)
P: (29.546,-20.849,9.471)
C4': (29.104,-19.666,13.148)
C2': (28.522,-17.480,13.843)
O2': (28.072,-17.645,15.174)
N1: (30.663,-16.679,12.877)
O4: (31.952,-13.796,10.414)
O2: (31.054,-15.216,14.604)
C6: (30.782,-16.952,11.535)
C5: (31.249,-16.053,10.660)
O3': (26.753,-19.039,13.108)
N3: (31.551,-14.569,12.485)
OP1: (28.488,-21.885,9.554)
OP2: (29.572,-19.917,8.322)
C2: (31.086,-15.470,13.406)
C1': (30.048,-17.636,13.802)
C3': (28.083,-18.574,12.875)
O5': (29.519,-20.007,10.820)
O4': (30.340,-18.949,13.353)
C5': (29.297,-20.667,12.053)
P: (29.546,-20.849,9.471)
C4': (29.104,-19.666,13.148)
C2': (28.522,-17.480,13.843)
O2': (28.072,-17.645,15.174)
N1: (30.663,-16.679,12.877)
O4: (31.952,-13.796,10.414)
O2: (31.054,-15.216,14.604)
C6: (30.782,-16.952,11.535)
C5: (31.249,-16.053,10.660)
O3': (26.753,-19.039,13.108)
OP1: (24.311,-19.211,12.615)
OP2: (25.945,-18.477,10.783)
C3': (23.065,-15.481,13.211)
C1': (23.956,-13.306,13.535)
C5': (25.157,-16.679,14.079)
O6: (25.831,-9.084,9.747)
O4': (24.908,-14.271,13.939)
C8: (24.674,-12.971,11.117)
C2: (25.235,-9.222,13.259)
C6: (25.572,-9.585,10.852)
C5: (25.203,-10.918,11.149)
C4: (24.864,-11.238,12.442)
P: (25.537,-18.479,12.214)
C4': (24.215,-15.507,14.203)
C2': (22.627,-14.028,13.260)
O2': (21.733,-13.837,14.331)
N1: (25.585,-8.792,11.999)
N2: (25.288,-8.313,14.244)
N3: (24.854,-10.452,13.533)
N7: (25.090,-12.024,10.323)
N9: (24.490,-12.548,12.409)
O5': (25.403,-16.969,12.706)
O3': (22.001,-16.283,13.674)
OP2: (25.945,-18.477,10.783)
C3': (23.065,-15.481,13.211)
C1': (23.956,-13.306,13.535)
C5': (25.157,-16.679,14.079)
O6: (25.831,-9.084,9.747)
O4': (24.908,-14.271,13.939)
C8: (24.674,-12.971,11.117)
C2: (25.235,-9.222,13.259)
C6: (25.572,-9.585,10.852)
C5: (25.203,-10.918,11.149)
C4: (24.864,-11.238,12.442)
P: (25.537,-18.479,12.214)
C4': (24.215,-15.507,14.203)
C2': (22.627,-14.028,13.260)
O2': (21.733,-13.837,14.331)
N1: (25.585,-8.792,11.999)
N2: (25.288,-8.313,14.244)
N3: (24.854,-10.452,13.533)
N7: (25.090,-12.024,10.323)
N9: (24.490,-12.548,12.409)
O5': (25.403,-16.969,12.706)
O3': (22.001,-16.283,13.674)
Image (generated by PyMOL):