ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1M8W:C3:C4

Extra

PDB:
ATOM 1 O3' G A 2 70.644 19.836 29.134 0.72 35.89 O
ATOM 2 P U A 3 69.642 18.591 29.037 0.72 39.82 P
ATOM 3 OP1 U A 3 68.302 19.131 28.705 0.72 39.46 O
ATOM 4 OP2 U A 3 69.810 17.733 30.236 0.72 39.61 O
ATOM 5 O5' U A 3 70.203 17.787 27.779 0.72 39.40 O
ATOM 6 C5' U A 3 69.729 16.491 27.468 0.72 37.53 C
ATOM 7 C4' U A 3 69.328 16.431 26.016 0.72 36.46 C
ATOM 8 O4' U A 3 70.482 16.729 25.186 0.72 33.71 O
ATOM 9 C3' U A 3 68.872 15.066 25.531 0.72 33.67 C
ATOM 10 O3' U A 3 67.504 14.861 25.868 0.72 37.61 O
ATOM 11 C2' U A 3 69.097 15.176 24.027 0.72 33.52 C
ATOM 12 O2' U A 3 68.057 15.863 23.353 0.72 31.21 O
ATOM 13 C1' U A 3 70.389 16.002 23.975 0.72 31.31 C
ATOM 14 N1 U A 3 71.581 15.154 23.835 0.72 27.88 N
ATOM 15 C2 U A 3 71.870 14.706 22.569 0.72 24.93 C
ATOM 16 O2 U A 3 71.203 15.014 21.601 0.72 28.41 O
ATOM 17 N3 U A 3 72.962 13.884 22.474 0.72 25.58 N
ATOM 18 C4 U A 3 73.787 13.471 23.500 0.72 24.22 C
ATOM 19 O4 U A 3 74.693 12.667 23.259 0.72 19.70 O
ATOM 20 C5 U A 3 73.437 13.994 24.792 0.72 24.43 C
ATOM 21 C6 U A 3 72.370 14.801 24.911 0.72 25.64 C
ATOM 22 P A A 4 67.029 13.433 26.440 0.72 36.43 P
ATOM 23 OP1 A A 4 65.731 13.628 27.122 0.72 41.85 O
ATOM 24 OP2 A A 4 68.167 12.845 27.189 0.72 36.46 O
ATOM 25 O5' A A 4 66.756 12.572 25.124 0.72 38.75 O
TER

ATOM 1 O3' U B 3 67.504 14.861 25.868 0.72 37.61 O
ATOM 2 P A B 4 67.029 13.433 26.440 0.72 36.43 P
ATOM 3 OP1 A B 4 65.731 13.628 27.122 0.72 41.85 O
ATOM 4 OP2 A B 4 68.167 12.845 27.189 0.72 36.46 O
ATOM 5 O5' A B 4 66.756 12.572 25.124 0.72 38.75 O
ATOM 6 C5' A B 4 65.869 13.054 24.113 0.72 39.77 C
ATOM 7 C4' A B 4 65.547 11.959 23.112 0.72 39.25 C
ATOM 8 O4' A B 4 66.755 11.568 22.413 0.72 37.54 O
ATOM 9 C3' A B 4 65.011 10.641 23.660 0.72 39.25 C
ATOM 10 O3' A B 4 63.602 10.715 23.878 0.72 40.98 O
ATOM 11 C2' A B 4 65.295 9.684 22.506 0.72 37.18 C
ATOM 12 O2' A B 4 64.310 9.781 21.496 0.72 34.22 O
ATOM 13 C1' A B 4 66.610 10.237 21.949 0.72 38.16 C
ATOM 14 N9 A B 4 67.811 9.468 22.284 0.72 38.00 N
ATOM 15 C8 A B 4 68.571 9.475 23.430 0.72 36.80 C
ATOM 16 N7 A B 4 69.613 8.671 23.378 0.72 36.01 N
ATOM 17 C5 A B 4 69.527 8.095 22.116 0.72 35.41 C
ATOM 18 C6 A B 4 70.337 7.156 21.435 0.72 35.67 C
ATOM 19 N6 A B 4 71.447 6.617 21.944 0.72 34.84 N
ATOM 20 N1 A B 4 69.961 6.791 20.189 0.72 34.87 N
ATOM 21 C2 A B 4 68.862 7.339 19.665 0.72 34.24 C
ATOM 22 N3 A B 4 68.025 8.232 20.199 0.72 36.80 N
ATOM 23 C4 A B 4 68.418 8.570 21.438 0.72 35.98 C
ATOM 24 P U B 5 62.935 9.964 25.141 0.72 45.93 P
ATOM 25 OP1 U B 5 61.724 10.763 25.482 0.72 43.55 O
ATOM 26 OP2 U B 5 63.974 9.731 26.180 0.72 42.48 O
ATOM 27 O5' U B 5 62.446 8.539 24.588 0.72 48.31 O
TER

Atoms:
C4: (73.787,13.471,23.500)
N3: (72.962,13.884,22.474)
OP1: (68.302,19.131,28.705)
OP2: (69.810,17.733,30.236)
C2: (71.870,14.706,22.569)
C1': (70.389,16.002,23.975)
C3': (68.872,15.066,25.531)
O5': (70.203,17.787,27.779)
O4': (70.482,16.729,25.186)
C5': (69.729,16.491,27.468)
P: (69.642,18.591,29.037)
C4': (69.328,16.431,26.016)
C2': (69.097,15.176,24.027)
O2': (68.057,15.863,23.353)
N1: (71.581,15.154,23.835)
O4: (74.693,12.667,23.259)
O2: (71.203,15.014,21.601)
C6: (72.370,14.801,24.911)
C5: (73.437,13.994,24.792)
O3': (67.504,14.861,25.868)
OP1: (65.731,13.628,27.122)
OP2: (68.167,12.845,27.189)
C3': (65.011,10.641,23.660)
C1': (66.610,10.237,21.949)
C5': (65.869,13.054,24.113)
O4': (66.755,11.568,22.413)
C8: (68.571,9.475,23.430)
O2': (64.310,9.781,21.496)
C6: (70.337,7.156,21.435)
C5: (69.527,8.095,22.116)
C4: (68.418,8.570,21.438)
P: (67.029,13.433,26.440)
C4': (65.547,11.959,23.112)
C2': (65.295,9.684,22.506)
C2: (68.862,7.339,19.665)
N1: (69.961,6.791,20.189)
N3: (68.025,8.232,20.199)
N6: (71.447,6.617,21.944)
N7: (69.613,8.671,23.378)
N9: (67.811,9.468,22.284)
O5': (66.756,12.572,25.124)
O3': (63.602,10.715,23.878)
Image (generated by PyMOL):
PyMOL image
show in jmol