Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:02108:02077
Extra
PDB:
ATOM 1 O3' C A2107 107.896 117.455 46.628 1.00 53.59 O
ATOM 2 P C A2108 106.695 116.626 47.295 1.00 51.07 P
ATOM 3 OP1 C A2108 105.974 117.585 48.161 1.00 49.91 O
ATOM 4 OP2 C A2108 107.260 115.387 47.884 1.00 50.60 O
ATOM 5 O5' C A2108 105.752 116.252 46.066 1.00 49.88 O
ATOM 6 C5' C A2108 105.080 117.286 45.323 1.00 50.85 C
ATOM 7 C4' C A2108 104.737 116.803 43.932 1.00 52.54 C
ATOM 8 O4' C A2108 105.953 116.423 43.233 1.00 53.67 O
ATOM 9 C3' C A2108 103.880 115.553 43.851 1.00 52.97 C
ATOM 10 O3' C A2108 102.504 115.842 44.045 1.00 54.60 O
ATOM 11 C2' C A2108 104.176 115.068 42.443 1.00 52.37 C
ATOM 12 O2' C A2108 103.488 115.832 41.477 1.00 52.31 O
ATOM 13 C1' C A2108 105.680 115.346 42.347 1.00 52.65 C
ATOM 14 N1 C A2108 106.505 114.181 42.744 1.00 51.51 N
ATOM 15 C2 C A2108 106.659 113.109 41.839 1.00 51.27 C
ATOM 16 O2 C A2108 106.158 113.193 40.706 1.00 51.57 O
ATOM 17 N3 C A2108 107.353 112.016 42.224 1.00 49.93 N
ATOM 18 C4 C A2108 107.896 111.965 43.440 1.00 49.61 C
ATOM 19 N4 C A2108 108.556 110.858 43.779 1.00 51.24 N
ATOM 20 C5 C A2108 107.785 113.043 44.364 1.00 49.83 C
ATOM 21 C6 C A2108 107.091 114.122 43.979 1.00 50.59 C
ATOM 22 P G A2109 101.633 114.930 45.043 1.00 54.18 P
ATOM 23 OP1 G A2109 100.447 115.733 45.423 1.00 53.69 O
ATOM 24 OP2 G A2109 102.524 114.374 46.106 1.00 53.34 O
ATOM 25 O5' G A2109 101.125 113.750 44.108 1.00 54.06 O
TER
ATOM 1 O3' C B2076 108.268 101.041 37.671 1.00 62.18 O
ATOM 2 P G B2077 109.223 101.944 36.746 1.00 61.85 P
ATOM 3 OP1 G B2077 109.389 101.199 35.477 1.00 62.70 O
ATOM 4 OP2 G B2077 110.422 102.355 37.526 1.00 61.10 O
ATOM 5 O5' G B2077 108.340 103.225 36.424 1.00 61.34 O
ATOM 6 C5' G B2077 107.190 103.117 35.576 1.00 59.59 C
ATOM 7 C4' G B2077 106.439 104.416 35.567 1.00 59.50 C
ATOM 8 O4' G B2077 106.001 104.722 36.916 1.00 56.99 O
ATOM 9 C3' G B2077 107.265 105.632 35.188 1.00 60.56 C
ATOM 10 O3' G B2077 107.445 105.735 33.772 1.00 64.78 O
ATOM 11 C2' G B2077 106.439 106.769 35.783 1.00 57.81 C
ATOM 12 O2' G B2077 105.320 107.116 34.992 1.00 57.67 O
ATOM 13 C1' G B2077 105.959 106.132 37.090 1.00 55.24 C
ATOM 14 N9 G B2077 106.776 106.498 38.247 1.00 51.13 N
ATOM 15 C8 G B2077 107.707 105.730 38.905 1.00 48.56 C
ATOM 16 N7 G B2077 108.279 106.359 39.898 1.00 46.99 N
ATOM 17 C5 G B2077 107.689 107.616 39.897 1.00 46.74 C
ATOM 18 C6 G B2077 107.909 108.747 40.739 1.00 46.53 C
ATOM 19 O6 G B2077 108.687 108.866 41.691 1.00 46.81 O
ATOM 20 N1 G B2077 107.103 109.815 40.379 1.00 46.98 N
ATOM 21 C2 G B2077 106.194 109.808 39.350 1.00 49.38 C
ATOM 22 N2 G B2077 105.503 110.942 39.167 1.00 49.40 N
ATOM 23 N3 G B2077 105.977 108.767 38.559 1.00 49.13 N
ATOM 24 C4 G B2077 106.755 107.715 38.887 1.00 48.85 C
ATOM 25 P C B2078 108.894 106.117 33.176 1.00 65.29 P
ATOM 26 OP1 C B2078 108.807 105.915 31.704 1.00 65.38 O
ATOM 27 OP2 C B2078 109.923 105.389 33.965 1.00 63.40 O
ATOM 28 O5' C B2078 109.043 107.677 33.462 1.00 63.03 O
TER
ATOM 2 P C A2108 106.695 116.626 47.295 1.00 51.07 P
ATOM 3 OP1 C A2108 105.974 117.585 48.161 1.00 49.91 O
ATOM 4 OP2 C A2108 107.260 115.387 47.884 1.00 50.60 O
ATOM 5 O5' C A2108 105.752 116.252 46.066 1.00 49.88 O
ATOM 6 C5' C A2108 105.080 117.286 45.323 1.00 50.85 C
ATOM 7 C4' C A2108 104.737 116.803 43.932 1.00 52.54 C
ATOM 8 O4' C A2108 105.953 116.423 43.233 1.00 53.67 O
ATOM 9 C3' C A2108 103.880 115.553 43.851 1.00 52.97 C
ATOM 10 O3' C A2108 102.504 115.842 44.045 1.00 54.60 O
ATOM 11 C2' C A2108 104.176 115.068 42.443 1.00 52.37 C
ATOM 12 O2' C A2108 103.488 115.832 41.477 1.00 52.31 O
ATOM 13 C1' C A2108 105.680 115.346 42.347 1.00 52.65 C
ATOM 14 N1 C A2108 106.505 114.181 42.744 1.00 51.51 N
ATOM 15 C2 C A2108 106.659 113.109 41.839 1.00 51.27 C
ATOM 16 O2 C A2108 106.158 113.193 40.706 1.00 51.57 O
ATOM 17 N3 C A2108 107.353 112.016 42.224 1.00 49.93 N
ATOM 18 C4 C A2108 107.896 111.965 43.440 1.00 49.61 C
ATOM 19 N4 C A2108 108.556 110.858 43.779 1.00 51.24 N
ATOM 20 C5 C A2108 107.785 113.043 44.364 1.00 49.83 C
ATOM 21 C6 C A2108 107.091 114.122 43.979 1.00 50.59 C
ATOM 22 P G A2109 101.633 114.930 45.043 1.00 54.18 P
ATOM 23 OP1 G A2109 100.447 115.733 45.423 1.00 53.69 O
ATOM 24 OP2 G A2109 102.524 114.374 46.106 1.00 53.34 O
ATOM 25 O5' G A2109 101.125 113.750 44.108 1.00 54.06 O
TER
ATOM 1 O3' C B2076 108.268 101.041 37.671 1.00 62.18 O
ATOM 2 P G B2077 109.223 101.944 36.746 1.00 61.85 P
ATOM 3 OP1 G B2077 109.389 101.199 35.477 1.00 62.70 O
ATOM 4 OP2 G B2077 110.422 102.355 37.526 1.00 61.10 O
ATOM 5 O5' G B2077 108.340 103.225 36.424 1.00 61.34 O
ATOM 6 C5' G B2077 107.190 103.117 35.576 1.00 59.59 C
ATOM 7 C4' G B2077 106.439 104.416 35.567 1.00 59.50 C
ATOM 8 O4' G B2077 106.001 104.722 36.916 1.00 56.99 O
ATOM 9 C3' G B2077 107.265 105.632 35.188 1.00 60.56 C
ATOM 10 O3' G B2077 107.445 105.735 33.772 1.00 64.78 O
ATOM 11 C2' G B2077 106.439 106.769 35.783 1.00 57.81 C
ATOM 12 O2' G B2077 105.320 107.116 34.992 1.00 57.67 O
ATOM 13 C1' G B2077 105.959 106.132 37.090 1.00 55.24 C
ATOM 14 N9 G B2077 106.776 106.498 38.247 1.00 51.13 N
ATOM 15 C8 G B2077 107.707 105.730 38.905 1.00 48.56 C
ATOM 16 N7 G B2077 108.279 106.359 39.898 1.00 46.99 N
ATOM 17 C5 G B2077 107.689 107.616 39.897 1.00 46.74 C
ATOM 18 C6 G B2077 107.909 108.747 40.739 1.00 46.53 C
ATOM 19 O6 G B2077 108.687 108.866 41.691 1.00 46.81 O
ATOM 20 N1 G B2077 107.103 109.815 40.379 1.00 46.98 N
ATOM 21 C2 G B2077 106.194 109.808 39.350 1.00 49.38 C
ATOM 22 N2 G B2077 105.503 110.942 39.167 1.00 49.40 N
ATOM 23 N3 G B2077 105.977 108.767 38.559 1.00 49.13 N
ATOM 24 C4 G B2077 106.755 107.715 38.887 1.00 48.85 C
ATOM 25 P C B2078 108.894 106.117 33.176 1.00 65.29 P
ATOM 26 OP1 C B2078 108.807 105.915 31.704 1.00 65.38 O
ATOM 27 OP2 C B2078 109.923 105.389 33.965 1.00 63.40 O
ATOM 28 O5' C B2078 109.043 107.677 33.462 1.00 63.03 O
TER
Atoms:
C2: (106.659,113.109,41.839)
OP1: (105.974,117.585,48.161)
OP2: (107.260,115.387,47.884)
C4: (107.896,111.965,43.440)
O5': (105.752,116.252,46.066)
C3': (103.880,115.553,43.851)
C1': (105.680,115.346,42.347)
O4': (105.953,116.423,43.233)
C5': (105.080,117.286,45.323)
P: (106.695,116.626,47.295)
O2: (106.158,113.193,40.706)
C4': (104.737,116.803,43.932)
C2': (104.176,115.068,42.443)
O2': (103.488,115.832,41.477)
N1: (106.505,114.181,42.744)
N3: (107.353,112.016,42.224)
N4: (108.556,110.858,43.779)
C6: (107.091,114.122,43.979)
C5: (107.785,113.043,44.364)
O3': (102.504,115.842,44.045)
OP1: (105.974,117.585,48.161)
OP2: (107.260,115.387,47.884)
C4: (107.896,111.965,43.440)
O5': (105.752,116.252,46.066)
C3': (103.880,115.553,43.851)
C1': (105.680,115.346,42.347)
O4': (105.953,116.423,43.233)
C5': (105.080,117.286,45.323)
P: (106.695,116.626,47.295)
O2: (106.158,113.193,40.706)
C4': (104.737,116.803,43.932)
C2': (104.176,115.068,42.443)
O2': (103.488,115.832,41.477)
N1: (106.505,114.181,42.744)
N3: (107.353,112.016,42.224)
N4: (108.556,110.858,43.779)
C6: (107.091,114.122,43.979)
C5: (107.785,113.043,44.364)
O3': (102.504,115.842,44.045)
OP1: (109.389,101.199,35.477)
OP2: (110.422,102.355,37.526)
C3': (107.265,105.632,35.188)
C1': (105.959,106.132,37.090)
C5': (107.190,103.117,35.576)
O6: (108.687,108.866,41.691)
O4': (106.001,104.722,36.916)
C8: (107.707,105.730,38.905)
C2: (106.194,109.808,39.350)
C6: (107.909,108.747,40.739)
C5: (107.689,107.616,39.897)
C4: (106.755,107.715,38.887)
P: (109.223,101.944,36.746)
C4': (106.439,104.416,35.567)
C2': (106.439,106.769,35.783)
O2': (105.320,107.116,34.992)
N1: (107.103,109.815,40.379)
N2: (105.503,110.942,39.167)
N3: (105.977,108.767,38.559)
N7: (108.279,106.359,39.898)
N9: (106.776,106.498,38.247)
O5': (108.340,103.225,36.424)
O3': (107.445,105.735,33.772)
OP2: (110.422,102.355,37.526)
C3': (107.265,105.632,35.188)
C1': (105.959,106.132,37.090)
C5': (107.190,103.117,35.576)
O6: (108.687,108.866,41.691)
O4': (106.001,104.722,36.916)
C8: (107.707,105.730,38.905)
C2: (106.194,109.808,39.350)
C6: (107.909,108.747,40.739)
C5: (107.689,107.616,39.897)
C4: (106.755,107.715,38.887)
P: (109.223,101.944,36.746)
C4': (106.439,104.416,35.567)
C2': (106.439,106.769,35.783)
O2': (105.320,107.116,34.992)
N1: (107.103,109.815,40.379)
N2: (105.503,110.942,39.167)
N3: (105.977,108.767,38.559)
N7: (108.279,106.359,39.898)
N9: (106.776,106.498,38.247)
O5': (108.340,103.225,36.424)
O3': (107.445,105.735,33.772)
Image (generated by PyMOL):