Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J00:A106:A107
Extra
PDB:
ATOM 1 O3' G A 105 -3.716 64.278 112.179 1.00 11.74 O
ATOM 2 P U A 106 -3.316 65.308 111.017 1.00 34.10 P
ATOM 3 OP1 U A 106 -2.546 66.401 111.659 1.00 44.84 O
ATOM 4 OP2 U A 106 -4.532 65.630 110.223 1.00 45.54 O
ATOM 5 O5' U A 106 -2.302 64.496 110.097 1.00 34.32 O
ATOM 6 C5' U A 106 -0.960 64.225 110.538 1.00 33.07 C
ATOM 7 C4' U A 106 -0.166 63.585 109.429 1.00 31.81 C
ATOM 8 O4' U A 106 -0.753 62.300 109.099 1.00 31.34 O
ATOM 9 C3' U A 106 -0.167 64.340 108.115 1.00 31.80 C
ATOM 10 O3' U A 106 0.764 65.408 108.101 1.00 31.00 O
ATOM 11 C2' U A 106 0.116 63.242 107.096 1.00 32.99 C
ATOM 12 O2' U A 106 1.485 62.899 106.956 1.00 35.49 O
ATOM 13 C1' U A 106 -0.642 62.066 107.707 1.00 32.08 C
ATOM 14 N1 U A 106 -1.993 61.950 107.143 1.00 39.31 N
ATOM 15 C2 U A 106 -2.138 61.249 105.961 1.00 40.06 C
ATOM 16 O2 U A 106 -1.206 60.713 105.385 1.00 43.10 O
ATOM 17 N3 U A 106 -3.417 61.199 105.474 1.00 39.40 N
ATOM 18 C4 U A 106 -4.543 61.762 106.036 1.00 39.61 C
ATOM 19 O4 U A 106 -5.633 61.604 105.487 1.00 40.03 O
ATOM 20 C5 U A 106 -4.314 62.464 107.258 1.00 39.45 C
ATOM 21 C6 U A 106 -3.080 62.529 107.759 1.00 38.38 C
ATOM 22 P A A 107 0.361 66.787 107.379 1.00 22.97 P
ATOM 23 OP1 A A 107 1.504 67.726 107.520 1.00 13.05 O
ATOM 24 OP2 A A 107 -0.973 67.180 107.881 1.00 11.86 O
ATOM 25 O5' A A 107 0.249 66.386 105.838 1.00 9.66 O
TER
ATOM 1 O3' U B 106 0.764 65.408 108.101 1.00 31.00 O
ATOM 2 P A B 107 0.361 66.787 107.379 1.00 22.97 P
ATOM 3 OP1 A B 107 1.504 67.726 107.520 1.00 13.05 O
ATOM 4 OP2 A B 107 -0.973 67.180 107.881 1.00 11.86 O
ATOM 5 O5' A B 107 0.249 66.386 105.838 1.00 9.66 O
ATOM 6 C5' A B 107 1.453 66.165 105.052 1.00 12.83 C
ATOM 7 C4' A B 107 1.425 67.017 103.802 1.00 15.18 C
ATOM 8 O4' A B 107 0.277 66.618 103.021 1.00 16.43 O
ATOM 9 C3' A B 107 1.236 68.502 104.063 1.00 16.82 C
ATOM 10 O3' A B 107 2.472 69.176 104.342 1.00 19.86 O
ATOM 11 C2' A B 107 0.410 69.016 102.884 1.00 17.30 C
ATOM 12 O2' A B 107 1.097 69.658 101.838 1.00 21.04 O
ATOM 13 C1' A B 107 -0.263 67.742 102.366 1.00 16.65 C
ATOM 14 N9 A B 107 -1.716 67.665 102.452 1.00 7.38 N
ATOM 15 C8 A B 107 -2.542 67.896 103.516 1.00 7.47 C
ATOM 16 N7 A B 107 -3.807 67.679 103.256 1.00 7.26 N
ATOM 17 C5 A B 107 -3.809 67.288 101.932 1.00 5.23 C
ATOM 18 C6 A B 107 -4.832 66.886 101.079 1.00 4.03 C
ATOM 19 N6 A B 107 -6.104 66.797 101.442 1.00 3.61 N
ATOM 20 N1 A B 107 -4.499 66.559 99.817 1.00 3.35 N
ATOM 21 C2 A B 107 -3.205 66.628 99.453 1.00 4.00 C
ATOM 22 N3 A B 107 -2.152 66.980 100.175 1.00 5.99 N
ATOM 23 C4 A B 107 -2.529 67.295 101.420 1.00 6.97 C
ATOM 24 P A B 108 3.703 69.147 103.285 1.00 33.36 P
ATOM 25 OP1 A B 108 4.699 70.156 103.736 1.00 37.15 O
ATOM 26 OP2 A B 108 3.245 69.187 101.880 1.00 34.99 O
ATOM 27 O5' A B 108 4.362 67.714 103.526 1.00 20.90 O
TER
ATOM 2 P U A 106 -3.316 65.308 111.017 1.00 34.10 P
ATOM 3 OP1 U A 106 -2.546 66.401 111.659 1.00 44.84 O
ATOM 4 OP2 U A 106 -4.532 65.630 110.223 1.00 45.54 O
ATOM 5 O5' U A 106 -2.302 64.496 110.097 1.00 34.32 O
ATOM 6 C5' U A 106 -0.960 64.225 110.538 1.00 33.07 C
ATOM 7 C4' U A 106 -0.166 63.585 109.429 1.00 31.81 C
ATOM 8 O4' U A 106 -0.753 62.300 109.099 1.00 31.34 O
ATOM 9 C3' U A 106 -0.167 64.340 108.115 1.00 31.80 C
ATOM 10 O3' U A 106 0.764 65.408 108.101 1.00 31.00 O
ATOM 11 C2' U A 106 0.116 63.242 107.096 1.00 32.99 C
ATOM 12 O2' U A 106 1.485 62.899 106.956 1.00 35.49 O
ATOM 13 C1' U A 106 -0.642 62.066 107.707 1.00 32.08 C
ATOM 14 N1 U A 106 -1.993 61.950 107.143 1.00 39.31 N
ATOM 15 C2 U A 106 -2.138 61.249 105.961 1.00 40.06 C
ATOM 16 O2 U A 106 -1.206 60.713 105.385 1.00 43.10 O
ATOM 17 N3 U A 106 -3.417 61.199 105.474 1.00 39.40 N
ATOM 18 C4 U A 106 -4.543 61.762 106.036 1.00 39.61 C
ATOM 19 O4 U A 106 -5.633 61.604 105.487 1.00 40.03 O
ATOM 20 C5 U A 106 -4.314 62.464 107.258 1.00 39.45 C
ATOM 21 C6 U A 106 -3.080 62.529 107.759 1.00 38.38 C
ATOM 22 P A A 107 0.361 66.787 107.379 1.00 22.97 P
ATOM 23 OP1 A A 107 1.504 67.726 107.520 1.00 13.05 O
ATOM 24 OP2 A A 107 -0.973 67.180 107.881 1.00 11.86 O
ATOM 25 O5' A A 107 0.249 66.386 105.838 1.00 9.66 O
TER
ATOM 1 O3' U B 106 0.764 65.408 108.101 1.00 31.00 O
ATOM 2 P A B 107 0.361 66.787 107.379 1.00 22.97 P
ATOM 3 OP1 A B 107 1.504 67.726 107.520 1.00 13.05 O
ATOM 4 OP2 A B 107 -0.973 67.180 107.881 1.00 11.86 O
ATOM 5 O5' A B 107 0.249 66.386 105.838 1.00 9.66 O
ATOM 6 C5' A B 107 1.453 66.165 105.052 1.00 12.83 C
ATOM 7 C4' A B 107 1.425 67.017 103.802 1.00 15.18 C
ATOM 8 O4' A B 107 0.277 66.618 103.021 1.00 16.43 O
ATOM 9 C3' A B 107 1.236 68.502 104.063 1.00 16.82 C
ATOM 10 O3' A B 107 2.472 69.176 104.342 1.00 19.86 O
ATOM 11 C2' A B 107 0.410 69.016 102.884 1.00 17.30 C
ATOM 12 O2' A B 107 1.097 69.658 101.838 1.00 21.04 O
ATOM 13 C1' A B 107 -0.263 67.742 102.366 1.00 16.65 C
ATOM 14 N9 A B 107 -1.716 67.665 102.452 1.00 7.38 N
ATOM 15 C8 A B 107 -2.542 67.896 103.516 1.00 7.47 C
ATOM 16 N7 A B 107 -3.807 67.679 103.256 1.00 7.26 N
ATOM 17 C5 A B 107 -3.809 67.288 101.932 1.00 5.23 C
ATOM 18 C6 A B 107 -4.832 66.886 101.079 1.00 4.03 C
ATOM 19 N6 A B 107 -6.104 66.797 101.442 1.00 3.61 N
ATOM 20 N1 A B 107 -4.499 66.559 99.817 1.00 3.35 N
ATOM 21 C2 A B 107 -3.205 66.628 99.453 1.00 4.00 C
ATOM 22 N3 A B 107 -2.152 66.980 100.175 1.00 5.99 N
ATOM 23 C4 A B 107 -2.529 67.295 101.420 1.00 6.97 C
ATOM 24 P A B 108 3.703 69.147 103.285 1.00 33.36 P
ATOM 25 OP1 A B 108 4.699 70.156 103.736 1.00 37.15 O
ATOM 26 OP2 A B 108 3.245 69.187 101.880 1.00 34.99 O
ATOM 27 O5' A B 108 4.362 67.714 103.526 1.00 20.90 O
TER
Atoms:
C4: (-4.543,61.762,106.036)
N3: (-3.417,61.199,105.474)
OP1: (-2.546,66.401,111.659)
OP2: (-4.532,65.630,110.223)
C2: (-2.138,61.249,105.961)
C1': (-0.642,62.066,107.707)
C3': (-0.167,64.340,108.115)
O5': (-2.302,64.496,110.097)
O4': (-0.753,62.300,109.099)
C5': (-0.960,64.225,110.538)
P: (-3.316,65.308,111.017)
C4': (-0.166,63.585,109.429)
C2': (0.116,63.242,107.096)
O2': (1.485,62.899,106.956)
N1: (-1.993,61.950,107.143)
O4: (-5.633,61.604,105.487)
O2: (-1.206,60.713,105.385)
C6: (-3.080,62.529,107.759)
C5: (-4.314,62.464,107.258)
O3': (0.764,65.408,108.101)
N3: (-3.417,61.199,105.474)
OP1: (-2.546,66.401,111.659)
OP2: (-4.532,65.630,110.223)
C2: (-2.138,61.249,105.961)
C1': (-0.642,62.066,107.707)
C3': (-0.167,64.340,108.115)
O5': (-2.302,64.496,110.097)
O4': (-0.753,62.300,109.099)
C5': (-0.960,64.225,110.538)
P: (-3.316,65.308,111.017)
C4': (-0.166,63.585,109.429)
C2': (0.116,63.242,107.096)
O2': (1.485,62.899,106.956)
N1: (-1.993,61.950,107.143)
O4: (-5.633,61.604,105.487)
O2: (-1.206,60.713,105.385)
C6: (-3.080,62.529,107.759)
C5: (-4.314,62.464,107.258)
O3': (0.764,65.408,108.101)
OP1: (1.504,67.726,107.520)
OP2: (-0.973,67.180,107.881)
C3': (1.236,68.502,104.063)
C1': (-0.263,67.742,102.366)
C5': (1.453,66.165,105.052)
O4': (0.277,66.618,103.021)
C8: (-2.542,67.896,103.516)
O2': (1.097,69.658,101.838)
C6: (-4.832,66.886,101.079)
C5: (-3.809,67.288,101.932)
C4: (-2.529,67.295,101.420)
P: (0.361,66.787,107.379)
C4': (1.425,67.017,103.802)
C2': (0.410,69.016,102.884)
C2: (-3.205,66.628,99.453)
N1: (-4.499,66.559,99.817)
N3: (-2.152,66.980,100.175)
N6: (-6.104,66.797,101.442)
N7: (-3.807,67.679,103.256)
N9: (-1.716,67.665,102.452)
O5': (0.249,66.386,105.838)
O3': (2.472,69.176,104.342)
OP2: (-0.973,67.180,107.881)
C3': (1.236,68.502,104.063)
C1': (-0.263,67.742,102.366)
C5': (1.453,66.165,105.052)
O4': (0.277,66.618,103.021)
C8: (-2.542,67.896,103.516)
O2': (1.097,69.658,101.838)
C6: (-4.832,66.886,101.079)
C5: (-3.809,67.288,101.932)
C4: (-2.529,67.295,101.420)
P: (0.361,66.787,107.379)
C4': (1.425,67.017,103.802)
C2': (0.410,69.016,102.884)
C2: (-3.205,66.628,99.453)
N1: (-4.499,66.559,99.817)
N3: (-2.152,66.980,100.175)
N6: (-6.104,66.797,101.442)
N7: (-3.807,67.679,103.256)
N9: (-1.716,67.665,102.452)
O5': (0.249,66.386,105.838)
O3': (2.472,69.176,104.342)
Image (generated by PyMOL):