Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J00:A232:A233
Extra
PDB:
ATOM 1 O3' C A 231 -9.701 76.517 95.793 1.00 23.32 O
ATOM 2 P C A 232 -8.881 77.884 95.602 1.00 52.39 P
ATOM 3 OP1 C A 232 -9.685 78.715 94.671 1.00 35.66 O
ATOM 4 OP2 C A 232 -7.469 77.561 95.264 1.00 31.35 O
ATOM 5 O5' C A 232 -8.890 78.530 97.058 1.00 27.90 O
ATOM 6 C5' C A 232 -10.121 78.961 97.651 1.00 25.85 C
ATOM 7 C4' C A 232 -9.867 79.735 98.922 1.00 24.90 C
ATOM 8 O4' C A 232 -9.451 78.846 99.997 1.00 25.77 O
ATOM 9 C3' C A 232 -8.782 80.793 98.880 1.00 24.14 C
ATOM 10 O3' C A 232 -9.208 82.002 98.279 1.00 22.54 O
ATOM 11 C2' C A 232 -8.472 80.965 100.360 1.00 24.98 C
ATOM 12 O2' C A 232 -9.511 81.696 100.989 1.00 25.77 O
ATOM 13 C1' C A 232 -8.549 79.523 100.859 1.00 25.00 C
ATOM 14 N1 C A 232 -7.231 78.843 100.813 1.00 12.38 N
ATOM 15 C2 C A 232 -6.402 78.884 101.944 1.00 11.98 C
ATOM 16 O2 C A 232 -6.787 79.489 102.955 1.00 14.51 O
ATOM 17 N3 C A 232 -5.197 78.276 101.903 1.00 10.90 N
ATOM 18 C4 C A 232 -4.800 77.667 100.791 1.00 11.35 C
ATOM 19 N4 C A 232 -3.591 77.118 100.783 1.00 12.43 N
ATOM 20 C5 C A 232 -5.619 77.604 99.632 1.00 11.66 C
ATOM 21 C6 C A 232 -6.815 78.195 99.686 1.00 11.98 C
ATOM 22 P A A 233 -8.169 82.831 97.372 1.00 50.30 P
ATOM 23 OP1 A A 233 -8.819 84.099 96.968 1.00 28.35 O
ATOM 24 OP2 A A 233 -7.609 81.927 96.334 1.00 28.64 O
ATOM 25 O5' A A 233 -6.973 83.184 98.360 1.00 30.12 O
TER
ATOM 1 O3' C B 232 -9.208 82.002 98.279 1.00 22.54 O
ATOM 2 P A B 233 -8.169 82.831 97.372 1.00 50.30 P
ATOM 3 OP1 A B 233 -8.819 84.099 96.968 1.00 28.35 O
ATOM 4 OP2 A B 233 -7.609 81.927 96.334 1.00 28.64 O
ATOM 5 O5' A B 233 -6.973 83.184 98.360 1.00 30.12 O
ATOM 6 C5' A B 233 -7.156 84.109 99.452 1.00 31.22 C
ATOM 7 C4' A B 233 -5.965 85.030 99.560 1.00 35.10 C
ATOM 8 O4' A B 233 -4.785 84.262 99.891 1.00 36.09 O
ATOM 9 C3' A B 233 -5.594 85.739 98.267 1.00 34.81 C
ATOM 10 O3' A B 233 -6.445 86.879 97.978 1.00 37.18 O
ATOM 11 C2' A B 233 -4.072 85.927 98.329 1.00 34.12 C
ATOM 12 O2' A B 233 -3.599 87.230 98.579 1.00 33.64 O
ATOM 13 C1' A B 233 -3.656 84.972 99.458 1.00 35.70 C
ATOM 14 N9 A B 233 -2.578 84.028 99.178 1.00 22.81 N
ATOM 15 C8 A B 233 -2.390 83.211 98.101 1.00 23.87 C
ATOM 16 N7 A B 233 -1.281 82.515 98.155 1.00 24.94 N
ATOM 17 C5 A B 233 -0.709 82.894 99.358 1.00 24.88 C
ATOM 18 C6 A B 233 0.479 82.517 100.004 1.00 24.31 C
ATOM 19 N6 A B 233 1.348 81.641 99.508 1.00 24.41 N
ATOM 20 N1 A B 233 0.751 83.078 101.196 1.00 25.19 N
ATOM 21 C2 A B 233 -0.115 83.954 101.696 1.00 25.44 C
ATOM 22 N3 A B 233 -1.261 84.390 101.186 1.00 25.48 N
ATOM 23 C4 A B 233 -1.502 83.815 100.000 1.00 24.61 C
ATOM 24 P U B 234 -6.465 88.204 98.924 1.00 62.66 P
ATOM 25 OP1 U B 234 -7.595 89.010 98.390 1.00 69.86 O
ATOM 26 OP2 U B 234 -5.137 88.844 99.084 1.00 72.59 O
ATOM 27 O5' U B 234 -6.946 87.706 100.357 1.00 25.03 O
TER
ATOM 2 P C A 232 -8.881 77.884 95.602 1.00 52.39 P
ATOM 3 OP1 C A 232 -9.685 78.715 94.671 1.00 35.66 O
ATOM 4 OP2 C A 232 -7.469 77.561 95.264 1.00 31.35 O
ATOM 5 O5' C A 232 -8.890 78.530 97.058 1.00 27.90 O
ATOM 6 C5' C A 232 -10.121 78.961 97.651 1.00 25.85 C
ATOM 7 C4' C A 232 -9.867 79.735 98.922 1.00 24.90 C
ATOM 8 O4' C A 232 -9.451 78.846 99.997 1.00 25.77 O
ATOM 9 C3' C A 232 -8.782 80.793 98.880 1.00 24.14 C
ATOM 10 O3' C A 232 -9.208 82.002 98.279 1.00 22.54 O
ATOM 11 C2' C A 232 -8.472 80.965 100.360 1.00 24.98 C
ATOM 12 O2' C A 232 -9.511 81.696 100.989 1.00 25.77 O
ATOM 13 C1' C A 232 -8.549 79.523 100.859 1.00 25.00 C
ATOM 14 N1 C A 232 -7.231 78.843 100.813 1.00 12.38 N
ATOM 15 C2 C A 232 -6.402 78.884 101.944 1.00 11.98 C
ATOM 16 O2 C A 232 -6.787 79.489 102.955 1.00 14.51 O
ATOM 17 N3 C A 232 -5.197 78.276 101.903 1.00 10.90 N
ATOM 18 C4 C A 232 -4.800 77.667 100.791 1.00 11.35 C
ATOM 19 N4 C A 232 -3.591 77.118 100.783 1.00 12.43 N
ATOM 20 C5 C A 232 -5.619 77.604 99.632 1.00 11.66 C
ATOM 21 C6 C A 232 -6.815 78.195 99.686 1.00 11.98 C
ATOM 22 P A A 233 -8.169 82.831 97.372 1.00 50.30 P
ATOM 23 OP1 A A 233 -8.819 84.099 96.968 1.00 28.35 O
ATOM 24 OP2 A A 233 -7.609 81.927 96.334 1.00 28.64 O
ATOM 25 O5' A A 233 -6.973 83.184 98.360 1.00 30.12 O
TER
ATOM 1 O3' C B 232 -9.208 82.002 98.279 1.00 22.54 O
ATOM 2 P A B 233 -8.169 82.831 97.372 1.00 50.30 P
ATOM 3 OP1 A B 233 -8.819 84.099 96.968 1.00 28.35 O
ATOM 4 OP2 A B 233 -7.609 81.927 96.334 1.00 28.64 O
ATOM 5 O5' A B 233 -6.973 83.184 98.360 1.00 30.12 O
ATOM 6 C5' A B 233 -7.156 84.109 99.452 1.00 31.22 C
ATOM 7 C4' A B 233 -5.965 85.030 99.560 1.00 35.10 C
ATOM 8 O4' A B 233 -4.785 84.262 99.891 1.00 36.09 O
ATOM 9 C3' A B 233 -5.594 85.739 98.267 1.00 34.81 C
ATOM 10 O3' A B 233 -6.445 86.879 97.978 1.00 37.18 O
ATOM 11 C2' A B 233 -4.072 85.927 98.329 1.00 34.12 C
ATOM 12 O2' A B 233 -3.599 87.230 98.579 1.00 33.64 O
ATOM 13 C1' A B 233 -3.656 84.972 99.458 1.00 35.70 C
ATOM 14 N9 A B 233 -2.578 84.028 99.178 1.00 22.81 N
ATOM 15 C8 A B 233 -2.390 83.211 98.101 1.00 23.87 C
ATOM 16 N7 A B 233 -1.281 82.515 98.155 1.00 24.94 N
ATOM 17 C5 A B 233 -0.709 82.894 99.358 1.00 24.88 C
ATOM 18 C6 A B 233 0.479 82.517 100.004 1.00 24.31 C
ATOM 19 N6 A B 233 1.348 81.641 99.508 1.00 24.41 N
ATOM 20 N1 A B 233 0.751 83.078 101.196 1.00 25.19 N
ATOM 21 C2 A B 233 -0.115 83.954 101.696 1.00 25.44 C
ATOM 22 N3 A B 233 -1.261 84.390 101.186 1.00 25.48 N
ATOM 23 C4 A B 233 -1.502 83.815 100.000 1.00 24.61 C
ATOM 24 P U B 234 -6.465 88.204 98.924 1.00 62.66 P
ATOM 25 OP1 U B 234 -7.595 89.010 98.390 1.00 69.86 O
ATOM 26 OP2 U B 234 -5.137 88.844 99.084 1.00 72.59 O
ATOM 27 O5' U B 234 -6.946 87.706 100.357 1.00 25.03 O
TER
Atoms:
C2: (-6.402,78.884,101.944)
OP1: (-9.685,78.715,94.671)
OP2: (-7.469,77.561,95.264)
C4: (-4.800,77.667,100.791)
O5': (-8.890,78.530,97.058)
C3': (-8.782,80.793,98.880)
C1': (-8.549,79.523,100.859)
O4': (-9.451,78.846,99.997)
C5': (-10.121,78.961,97.651)
P: (-8.881,77.884,95.602)
O2: (-6.787,79.489,102.955)
C4': (-9.867,79.735,98.922)
C2': (-8.472,80.965,100.360)
O2': (-9.511,81.696,100.989)
N1: (-7.231,78.843,100.813)
N3: (-5.197,78.276,101.903)
N4: (-3.591,77.118,100.783)
C6: (-6.815,78.195,99.686)
C5: (-5.619,77.604,99.632)
O3': (-9.208,82.002,98.279)
OP1: (-9.685,78.715,94.671)
OP2: (-7.469,77.561,95.264)
C4: (-4.800,77.667,100.791)
O5': (-8.890,78.530,97.058)
C3': (-8.782,80.793,98.880)
C1': (-8.549,79.523,100.859)
O4': (-9.451,78.846,99.997)
C5': (-10.121,78.961,97.651)
P: (-8.881,77.884,95.602)
O2: (-6.787,79.489,102.955)
C4': (-9.867,79.735,98.922)
C2': (-8.472,80.965,100.360)
O2': (-9.511,81.696,100.989)
N1: (-7.231,78.843,100.813)
N3: (-5.197,78.276,101.903)
N4: (-3.591,77.118,100.783)
C6: (-6.815,78.195,99.686)
C5: (-5.619,77.604,99.632)
O3': (-9.208,82.002,98.279)
OP1: (-8.819,84.099,96.968)
OP2: (-7.609,81.927,96.334)
C3': (-5.594,85.739,98.267)
C1': (-3.656,84.972,99.458)
C5': (-7.156,84.109,99.452)
O4': (-4.785,84.262,99.891)
C8: (-2.390,83.211,98.101)
O2': (-3.599,87.230,98.579)
C6: (0.479,82.517,100.004)
C5: (-0.709,82.894,99.358)
C4: (-1.502,83.815,100.000)
P: (-8.169,82.831,97.372)
C4': (-5.965,85.030,99.560)
C2': (-4.072,85.927,98.329)
C2: (-0.115,83.954,101.696)
N1: (0.751,83.078,101.196)
N3: (-1.261,84.390,101.186)
N6: (1.348,81.641,99.508)
N7: (-1.281,82.515,98.155)
N9: (-2.578,84.028,99.178)
O5': (-6.973,83.184,98.360)
O3': (-6.445,86.879,97.978)
OP2: (-7.609,81.927,96.334)
C3': (-5.594,85.739,98.267)
C1': (-3.656,84.972,99.458)
C5': (-7.156,84.109,99.452)
O4': (-4.785,84.262,99.891)
C8: (-2.390,83.211,98.101)
O2': (-3.599,87.230,98.579)
C6: (0.479,82.517,100.004)
C5: (-0.709,82.894,99.358)
C4: (-1.502,83.815,100.000)
P: (-8.169,82.831,97.372)
C4': (-5.965,85.030,99.560)
C2': (-4.072,85.927,98.329)
C2: (-0.115,83.954,101.696)
N1: (0.751,83.078,101.196)
N3: (-1.261,84.390,101.186)
N6: (1.348,81.641,99.508)
N7: (-1.281,82.515,98.155)
N9: (-2.578,84.028,99.178)
O5': (-6.973,83.184,98.360)
O3': (-6.445,86.879,97.978)
Image (generated by PyMOL):