Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J00:A235:A236
Extra
PDB:
ATOM 1 O3' U A 234 -8.346 85.926 103.754 1.00 29.56 O
ATOM 2 P C A 235 -7.889 84.376 103.832 1.00 42.15 P
ATOM 3 OP1 C A 235 -8.008 83.764 102.488 1.00 34.02 O
ATOM 4 OP2 C A 235 -8.607 83.766 104.986 1.00 34.32 O
ATOM 5 O5' C A 235 -6.335 84.454 104.184 1.00 16.21 O
ATOM 6 C5' C A 235 -5.892 85.166 105.353 1.00 14.96 C
ATOM 7 C4' C A 235 -4.459 84.828 105.682 1.00 15.37 C
ATOM 8 O4' C A 235 -4.257 83.399 105.532 1.00 15.51 O
ATOM 9 C3' C A 235 -3.361 85.457 104.841 1.00 13.66 C
ATOM 10 O3' C A 235 -3.046 86.763 105.334 1.00 14.56 O
ATOM 11 C2' C A 235 -2.201 84.490 105.075 1.00 14.60 C
ATOM 12 O2' C A 235 -1.540 84.694 106.306 1.00 14.21 O
ATOM 13 C1' C A 235 -2.914 83.143 105.176 1.00 15.90 C
ATOM 14 N1 C A 235 -2.868 82.417 103.897 1.00 4.78 N
ATOM 15 C2 C A 235 -1.653 81.858 103.494 1.00 4.45 C
ATOM 16 O2 C A 235 -0.680 81.959 104.237 1.00 1.49 O
ATOM 17 N3 C A 235 -1.568 81.233 102.302 1.00 4.81 N
ATOM 18 C4 C A 235 -2.649 81.149 101.518 1.00 3.45 C
ATOM 19 N4 C A 235 -2.526 80.528 100.346 1.00 3.74 N
ATOM 20 C5 C A 235 -3.908 81.698 101.905 1.00 3.32 C
ATOM 21 C6 C A 235 -3.974 82.311 103.096 1.00 2.74 C
ATOM 22 P A A 236 -2.461 87.891 104.344 1.00 40.63 P
ATOM 23 OP1 A A 236 -2.386 89.109 105.173 1.00 29.05 O
ATOM 24 OP2 A A 236 -3.204 87.915 103.056 1.00 27.71 O
ATOM 25 O5' A A 236 -0.970 87.454 104.037 1.00 25.31 O
TER
ATOM 1 O3' C B 235 -3.046 86.763 105.334 1.00 14.56 O
ATOM 2 P A B 236 -2.461 87.891 104.344 1.00 40.63 P
ATOM 3 OP1 A B 236 -2.386 89.109 105.173 1.00 29.05 O
ATOM 4 OP2 A B 236 -3.204 87.915 103.056 1.00 27.71 O
ATOM 5 O5' A B 236 -0.970 87.454 104.037 1.00 25.31 O
ATOM 6 C5' A B 236 -0.089 87.189 105.106 1.00 26.44 C
ATOM 7 C4' A B 236 1.321 87.547 104.730 1.00 26.87 C
ATOM 8 O4' A B 236 1.889 86.583 103.805 1.00 27.99 O
ATOM 9 C3' A B 236 1.586 88.922 104.137 1.00 26.80 C
ATOM 10 O3' A B 236 2.791 89.354 104.737 1.00 27.41 O
ATOM 11 C2' A B 236 1.888 88.618 102.670 1.00 27.27 C
ATOM 12 O2' A B 236 2.793 89.544 102.105 1.00 28.07 O
ATOM 13 C1' A B 236 2.586 87.267 102.790 1.00 27.36 C
ATOM 14 N9 A B 236 2.609 86.435 101.589 1.00 5.53 N
ATOM 15 C8 A B 236 1.606 86.182 100.697 1.00 5.65 C
ATOM 16 N7 A B 236 1.966 85.404 99.707 1.00 6.79 N
ATOM 17 C5 A B 236 3.295 85.131 99.970 1.00 4.44 C
ATOM 18 C6 A B 236 4.243 84.389 99.286 1.00 3.34 C
ATOM 19 N6 A B 236 4.001 83.784 98.118 1.00 1.61 N
ATOM 20 N1 A B 236 5.475 84.294 99.827 1.00 3.97 N
ATOM 21 C2 A B 236 5.723 84.932 100.962 1.00 3.06 C
ATOM 22 N3 A B 236 4.917 85.686 101.685 1.00 4.43 N
ATOM 23 C4 A B 236 3.700 85.744 101.129 1.00 4.80 C
ATOM 24 P G B 237 3.013 90.900 105.078 1.00 61.41 P
ATOM 25 OP1 G B 237 2.353 91.159 106.386 1.00 54.41 O
ATOM 26 OP2 G B 237 2.638 91.714 103.888 1.00 56.79 O
ATOM 27 O5' G B 237 4.595 90.963 105.259 1.00 13.05 O
TER
ATOM 2 P C A 235 -7.889 84.376 103.832 1.00 42.15 P
ATOM 3 OP1 C A 235 -8.008 83.764 102.488 1.00 34.02 O
ATOM 4 OP2 C A 235 -8.607 83.766 104.986 1.00 34.32 O
ATOM 5 O5' C A 235 -6.335 84.454 104.184 1.00 16.21 O
ATOM 6 C5' C A 235 -5.892 85.166 105.353 1.00 14.96 C
ATOM 7 C4' C A 235 -4.459 84.828 105.682 1.00 15.37 C
ATOM 8 O4' C A 235 -4.257 83.399 105.532 1.00 15.51 O
ATOM 9 C3' C A 235 -3.361 85.457 104.841 1.00 13.66 C
ATOM 10 O3' C A 235 -3.046 86.763 105.334 1.00 14.56 O
ATOM 11 C2' C A 235 -2.201 84.490 105.075 1.00 14.60 C
ATOM 12 O2' C A 235 -1.540 84.694 106.306 1.00 14.21 O
ATOM 13 C1' C A 235 -2.914 83.143 105.176 1.00 15.90 C
ATOM 14 N1 C A 235 -2.868 82.417 103.897 1.00 4.78 N
ATOM 15 C2 C A 235 -1.653 81.858 103.494 1.00 4.45 C
ATOM 16 O2 C A 235 -0.680 81.959 104.237 1.00 1.49 O
ATOM 17 N3 C A 235 -1.568 81.233 102.302 1.00 4.81 N
ATOM 18 C4 C A 235 -2.649 81.149 101.518 1.00 3.45 C
ATOM 19 N4 C A 235 -2.526 80.528 100.346 1.00 3.74 N
ATOM 20 C5 C A 235 -3.908 81.698 101.905 1.00 3.32 C
ATOM 21 C6 C A 235 -3.974 82.311 103.096 1.00 2.74 C
ATOM 22 P A A 236 -2.461 87.891 104.344 1.00 40.63 P
ATOM 23 OP1 A A 236 -2.386 89.109 105.173 1.00 29.05 O
ATOM 24 OP2 A A 236 -3.204 87.915 103.056 1.00 27.71 O
ATOM 25 O5' A A 236 -0.970 87.454 104.037 1.00 25.31 O
TER
ATOM 1 O3' C B 235 -3.046 86.763 105.334 1.00 14.56 O
ATOM 2 P A B 236 -2.461 87.891 104.344 1.00 40.63 P
ATOM 3 OP1 A B 236 -2.386 89.109 105.173 1.00 29.05 O
ATOM 4 OP2 A B 236 -3.204 87.915 103.056 1.00 27.71 O
ATOM 5 O5' A B 236 -0.970 87.454 104.037 1.00 25.31 O
ATOM 6 C5' A B 236 -0.089 87.189 105.106 1.00 26.44 C
ATOM 7 C4' A B 236 1.321 87.547 104.730 1.00 26.87 C
ATOM 8 O4' A B 236 1.889 86.583 103.805 1.00 27.99 O
ATOM 9 C3' A B 236 1.586 88.922 104.137 1.00 26.80 C
ATOM 10 O3' A B 236 2.791 89.354 104.737 1.00 27.41 O
ATOM 11 C2' A B 236 1.888 88.618 102.670 1.00 27.27 C
ATOM 12 O2' A B 236 2.793 89.544 102.105 1.00 28.07 O
ATOM 13 C1' A B 236 2.586 87.267 102.790 1.00 27.36 C
ATOM 14 N9 A B 236 2.609 86.435 101.589 1.00 5.53 N
ATOM 15 C8 A B 236 1.606 86.182 100.697 1.00 5.65 C
ATOM 16 N7 A B 236 1.966 85.404 99.707 1.00 6.79 N
ATOM 17 C5 A B 236 3.295 85.131 99.970 1.00 4.44 C
ATOM 18 C6 A B 236 4.243 84.389 99.286 1.00 3.34 C
ATOM 19 N6 A B 236 4.001 83.784 98.118 1.00 1.61 N
ATOM 20 N1 A B 236 5.475 84.294 99.827 1.00 3.97 N
ATOM 21 C2 A B 236 5.723 84.932 100.962 1.00 3.06 C
ATOM 22 N3 A B 236 4.917 85.686 101.685 1.00 4.43 N
ATOM 23 C4 A B 236 3.700 85.744 101.129 1.00 4.80 C
ATOM 24 P G B 237 3.013 90.900 105.078 1.00 61.41 P
ATOM 25 OP1 G B 237 2.353 91.159 106.386 1.00 54.41 O
ATOM 26 OP2 G B 237 2.638 91.714 103.888 1.00 56.79 O
ATOM 27 O5' G B 237 4.595 90.963 105.259 1.00 13.05 O
TER
Atoms:
C2: (-1.653,81.858,103.494)
OP1: (-8.008,83.764,102.488)
OP2: (-8.607,83.766,104.986)
C4: (-2.649,81.149,101.518)
O5': (-6.335,84.454,104.184)
C3': (-3.361,85.457,104.841)
C1': (-2.914,83.143,105.176)
O4': (-4.257,83.399,105.532)
C5': (-5.892,85.166,105.353)
P: (-7.889,84.376,103.832)
O2: (-0.680,81.959,104.237)
C4': (-4.459,84.828,105.682)
C2': (-2.201,84.490,105.075)
O2': (-1.540,84.694,106.306)
N1: (-2.868,82.417,103.897)
N3: (-1.568,81.233,102.302)
N4: (-2.526,80.528,100.346)
C6: (-3.974,82.311,103.096)
C5: (-3.908,81.698,101.905)
O3': (-3.046,86.763,105.334)
OP1: (-8.008,83.764,102.488)
OP2: (-8.607,83.766,104.986)
C4: (-2.649,81.149,101.518)
O5': (-6.335,84.454,104.184)
C3': (-3.361,85.457,104.841)
C1': (-2.914,83.143,105.176)
O4': (-4.257,83.399,105.532)
C5': (-5.892,85.166,105.353)
P: (-7.889,84.376,103.832)
O2: (-0.680,81.959,104.237)
C4': (-4.459,84.828,105.682)
C2': (-2.201,84.490,105.075)
O2': (-1.540,84.694,106.306)
N1: (-2.868,82.417,103.897)
N3: (-1.568,81.233,102.302)
N4: (-2.526,80.528,100.346)
C6: (-3.974,82.311,103.096)
C5: (-3.908,81.698,101.905)
O3': (-3.046,86.763,105.334)
OP1: (-2.386,89.109,105.173)
OP2: (-3.204,87.915,103.056)
C3': (1.586,88.922,104.137)
C1': (2.586,87.267,102.790)
C5': (-0.089,87.189,105.106)
O4': (1.889,86.583,103.805)
C8: (1.606,86.182,100.697)
O2': (2.793,89.544,102.105)
C6: (4.243,84.389,99.286)
C5: (3.295,85.131,99.970)
C4: (3.700,85.744,101.129)
P: (-2.461,87.891,104.344)
C4': (1.321,87.547,104.730)
C2': (1.888,88.618,102.670)
C2: (5.723,84.932,100.962)
N1: (5.475,84.294,99.827)
N3: (4.917,85.686,101.685)
N6: (4.001,83.784,98.118)
N7: (1.966,85.404,99.707)
N9: (2.609,86.435,101.589)
O5': (-0.970,87.454,104.037)
O3': (2.791,89.354,104.737)
OP2: (-3.204,87.915,103.056)
C3': (1.586,88.922,104.137)
C1': (2.586,87.267,102.790)
C5': (-0.089,87.189,105.106)
O4': (1.889,86.583,103.805)
C8: (1.606,86.182,100.697)
O2': (2.793,89.544,102.105)
C6: (4.243,84.389,99.286)
C5: (3.295,85.131,99.970)
C4: (3.700,85.744,101.129)
P: (-2.461,87.891,104.344)
C4': (1.321,87.547,104.730)
C2': (1.888,88.618,102.670)
C2: (5.723,84.932,100.962)
N1: (5.475,84.294,99.827)
N3: (4.917,85.686,101.685)
N6: (4.001,83.784,98.118)
N7: (1.966,85.404,99.707)
N9: (2.609,86.435,101.589)
O5': (-0.970,87.454,104.037)
O3': (2.791,89.354,104.737)
Image (generated by PyMOL):