ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J02:A473:A474

Extra

PDB:
ATOM 1 O3' G A 472 -104.651 25.858 -97.226 1.00 59.32 O
ATOM 2 P U A 473 -105.307 26.978 -96.282 1.00 85.96 P
ATOM 3 OP1 U A 473 -106.476 27.554 -96.988 1.00 64.99 O
ATOM 4 OP2 U A 473 -104.226 27.873 -95.795 1.00 63.93 O
ATOM 5 O5' U A 473 -105.864 26.150 -95.048 1.00 39.74 O
ATOM 6 C5' U A 473 -106.916 25.196 -95.227 1.00 38.54 C
ATOM 7 C4' U A 473 -107.088 24.395 -93.968 1.00 38.09 C
ATOM 8 O4' U A 473 -105.905 23.587 -93.743 1.00 38.23 O
ATOM 9 C3' U A 473 -107.225 25.248 -92.720 1.00 37.66 C
ATOM 10 O3' U A 473 -108.573 25.613 -92.510 1.00 38.21 O
ATOM 11 C2' U A 473 -106.715 24.323 -91.629 1.00 37.34 C
ATOM 12 O2' U A 473 -107.728 23.431 -91.193 1.00 37.11 O
ATOM 13 C1' U A 473 -105.603 23.567 -92.363 1.00 37.40 C
ATOM 14 N1 U A 473 -104.286 24.193 -92.177 1.00 44.56 N
ATOM 15 C2 U A 473 -103.589 23.887 -91.029 1.00 43.89 C
ATOM 16 O2 U A 473 -104.004 23.110 -90.191 1.00 43.44 O
ATOM 17 N3 U A 473 -102.386 24.526 -90.893 1.00 42.82 N
ATOM 18 C4 U A 473 -101.823 25.421 -91.763 1.00 42.28 C
ATOM 19 O4 U A 473 -100.786 25.994 -91.441 1.00 41.18 O
ATOM 20 C5 U A 473 -102.593 25.671 -92.939 1.00 42.59 C
ATOM 21 C6 U A 473 -103.769 25.064 -93.101 1.00 43.57 C
ATOM 22 P A A 474 -108.916 26.914 -91.643 1.00 92.37 P
ATOM 23 OP1 A A 474 -110.398 27.004 -91.624 1.00103.26 O
ATOM 24 OP2 A A 474 -108.123 28.047 -92.169 1.00102.62 O
ATOM 25 O5' A A 474 -108.403 26.563 -90.173 1.00 81.79 O
TER

ATOM 1 O3' U B 473 -108.573 25.613 -92.510 1.00 38.21 O
ATOM 2 P A B 474 -108.916 26.914 -91.643 1.00 92.37 P
ATOM 3 OP1 A B 474 -110.398 27.004 -91.624 1.00103.26 O
ATOM 4 OP2 A B 474 -108.123 28.047 -92.169 1.00102.62 O
ATOM 5 O5' A B 474 -108.403 26.563 -90.173 1.00 81.79 O
ATOM 6 C5' A B 474 -109.174 26.956 -89.013 1.00 82.08 C
ATOM 7 C4' A B 474 -108.413 26.672 -87.737 1.00 82.23 C
ATOM 8 O4' A B 474 -107.095 27.278 -87.811 1.00 82.31 O
ATOM 9 C3' A B 474 -109.069 27.218 -86.462 1.00 82.62 C
ATOM 10 O3' A B 474 -108.753 26.368 -85.353 1.00 83.72 O
ATOM 11 C2' A B 474 -108.289 28.510 -86.221 1.00 82.33 C
ATOM 12 O2' A B 474 -108.271 28.905 -84.862 1.00 82.45 O
ATOM 13 C1' A B 474 -106.899 28.072 -86.669 1.00 81.88 C
ATOM 14 N9 A B 474 -105.906 29.097 -86.960 1.00 37.56 N
ATOM 15 C8 A B 474 -105.894 30.079 -87.909 1.00 38.19 C
ATOM 16 N7 A B 474 -104.800 30.801 -87.903 1.00 38.35 N
ATOM 17 C5 A B 474 -104.049 30.260 -86.870 1.00 37.82 C
ATOM 18 C6 A B 474 -102.786 30.581 -86.340 1.00 37.47 C
ATOM 19 N6 A B 474 -102.021 31.565 -86.794 1.00 37.27 N
ATOM 20 N1 A B 474 -102.329 29.846 -85.305 1.00 37.62 N
ATOM 21 C2 A B 474 -103.096 28.865 -84.837 1.00 37.75 C
ATOM 22 N3 A B 474 -104.299 28.469 -85.245 1.00 37.83 N
ATOM 23 C4 A B 474 -104.722 29.217 -86.279 1.00 37.61 C
ATOM 24 P A B 475 -109.586 25.022 -85.078 1.00149.01 P
ATOM 25 OP1 A B 475 -110.248 24.607 -86.340 1.00 46.00 O
ATOM 26 OP2 A B 475 -110.406 25.273 -83.868 1.00 44.26 O
ATOM 27 O5' A B 475 -108.439 23.963 -84.738 1.00 42.50 O
TER

Atoms:
C4: (-101.823,25.421,-91.763)
N3: (-102.386,24.526,-90.893)
OP1: (-106.476,27.554,-96.988)
OP2: (-104.226,27.873,-95.795)
C2: (-103.589,23.887,-91.029)
C1': (-105.603,23.567,-92.363)
C3': (-107.225,25.248,-92.720)
O5': (-105.864,26.150,-95.048)
O4': (-105.905,23.587,-93.743)
C5': (-106.916,25.196,-95.227)
P: (-105.307,26.978,-96.282)
C4': (-107.088,24.395,-93.968)
C2': (-106.715,24.323,-91.629)
O2': (-107.728,23.431,-91.193)
N1: (-104.286,24.193,-92.177)
O4: (-100.786,25.994,-91.441)
O2: (-104.004,23.110,-90.191)
C6: (-103.769,25.064,-93.101)
C5: (-102.593,25.671,-92.939)
O3': (-108.573,25.613,-92.510)
OP1: (-110.398,27.004,-91.624)
OP2: (-108.123,28.047,-92.169)
C3': (-109.069,27.218,-86.462)
C1': (-106.899,28.072,-86.669)
C5': (-109.174,26.956,-89.013)
O4': (-107.095,27.278,-87.811)
C8: (-105.894,30.079,-87.909)
O2': (-108.271,28.905,-84.862)
C6: (-102.786,30.581,-86.340)
C5: (-104.049,30.260,-86.870)
C4: (-104.722,29.217,-86.279)
P: (-108.916,26.914,-91.643)
C4': (-108.413,26.672,-87.737)
C2': (-108.289,28.510,-86.221)
C2: (-103.096,28.865,-84.837)
N1: (-102.329,29.846,-85.305)
N3: (-104.299,28.469,-85.245)
N6: (-102.021,31.565,-86.794)
N7: (-104.800,30.801,-87.903)
N9: (-105.906,29.097,-86.960)
O5': (-108.403,26.563,-90.173)
O3': (-108.753,26.368,-85.353)
Image (generated by PyMOL):
PyMOL image
show in jmol