Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J03:A538:A539
Extra
PDB:
ATOM 1 O3' U A 537 -76.528-109.055 -2.165 1.00 51.30 O
ATOM 2 P U A 538 -76.485-108.791 -3.742 1.00 28.30 P
ATOM 3 OP1 U A 538 -77.710-109.389 -4.327 1.00 60.40 O
ATOM 4 OP2 U A 538 -75.152-109.169 -4.290 1.00 60.40 O
ATOM 5 O5' U A 538 -76.654-107.212 -3.813 1.00 46.43 O
ATOM 6 C5' U A 538 -76.325-106.509 -5.003 1.00 46.43 C
ATOM 7 C4' U A 538 -75.879-105.108 -4.684 1.00 46.43 C
ATOM 8 O4' U A 538 -74.931-105.106 -3.586 1.00 46.43 O
ATOM 9 C3' U A 538 -75.138-104.490 -5.850 1.00 46.43 C
ATOM 10 O3' U A 538 -76.082-103.968 -6.772 1.00 46.43 O
ATOM 11 C2' U A 538 -74.228-103.471 -5.177 1.00 46.43 C
ATOM 12 O2' U A 538 -74.884-102.254 -4.898 1.00 46.43 O
ATOM 13 C1' U A 538 -73.902-104.169 -3.850 1.00 46.43 C
ATOM 14 N1 U A 538 -72.597-104.859 -3.797 1.00 29.69 N
ATOM 15 C2 U A 538 -71.458-104.076 -3.850 1.00 29.69 C
ATOM 16 O2 U A 538 -71.495-102.857 -3.966 1.00 29.69 O
ATOM 17 N3 U A 538 -70.271-104.766 -3.764 1.00 29.69 N
ATOM 18 C4 U A 538 -70.102-106.119 -3.630 1.00 29.69 C
ATOM 19 O4 U A 538 -68.973-106.561 -3.418 1.00 29.69 O
ATOM 20 C5 U A 538 -71.313-106.868 -3.602 1.00 29.69 C
ATOM 21 C6 U A 538 -72.491-106.231 -3.683 1.00 29.69 C
ATOM 22 P A A 539 -76.067-104.477 -8.302 1.00 46.76 P
ATOM 23 OP1 A A 539 -77.462-104.355 -8.825 1.00 64.69 O
ATOM 24 OP2 A A 539 -75.351-105.774 -8.420 1.00 65.00 O
ATOM 25 O5' A A 539 -75.160-103.377 -9.010 1.00 16.77 O
TER
ATOM 1 O3' U B 538 -76.082-103.968 -6.772 1.00 46.43 O
ATOM 2 P A B 539 -76.067-104.477 -8.302 1.00 46.76 P
ATOM 3 OP1 A B 539 -77.462-104.355 -8.825 1.00 64.69 O
ATOM 4 OP2 A B 539 -75.351-105.774 -8.420 1.00 65.00 O
ATOM 5 O5' A B 539 -75.160-103.377 -9.010 1.00 16.77 O
ATOM 6 C5' A B 539 -75.449-101.977 -8.801 1.00 16.77 C
ATOM 7 C4' A B 539 -74.683-101.127 -9.767 1.00 16.77 C
ATOM 8 O4' A B 539 -73.295-101.115 -9.391 1.00 16.77 O
ATOM 9 C3' A B 539 -74.703-101.619 -11.193 1.00 16.77 C
ATOM 10 O3' A B 539 -75.920-101.165 -11.819 1.00 16.77 O
ATOM 11 C2' A B 539 -73.419-101.008 -11.765 1.00 16.77 C
ATOM 12 O2' A B 539 -73.618 -99.703 -12.244 1.00 16.77 O
ATOM 13 C1' A B 539 -72.516-100.882 -10.529 1.00 16.77 C
ATOM 14 N9 A B 539 -71.318-101.717 -10.444 1.00 19.49 N
ATOM 15 C8 A B 539 -71.255-103.068 -10.309 1.00 19.56 C
ATOM 16 N7 A B 539 -70.035-103.539 -10.259 1.00 19.57 N
ATOM 17 C5 A B 539 -69.240-102.420 -10.374 1.00 19.64 C
ATOM 18 C6 A B 539 -67.850-102.257 -10.406 1.00 19.59 C
ATOM 19 N6 A B 539 -66.986-103.264 -10.356 1.00 19.60 N
ATOM 20 N1 A B 539 -67.368-101.007 -10.507 1.00 19.57 N
ATOM 21 C2 A B 539 -68.240-100.000 -10.589 1.00 19.56 C
ATOM 22 N3 A B 539 -69.574-100.029 -10.586 1.00 19.69 N
ATOM 23 C4 A B 539 -70.014-101.287 -10.475 1.00 19.65 C
ATOM 24 P C B 540 -76.970-102.234 -12.442 1.00 3.60 P
ATOM 25 OP1 C B 540 -77.279-103.258 -11.411 1.00 33.94 O
ATOM 26 OP2 C B 540 -76.416-102.652 -13.755 1.00 33.82 O
ATOM 27 O5' C B 540 -78.323-101.431 -12.702 1.00 39.21 O
TER
ATOM 2 P U A 538 -76.485-108.791 -3.742 1.00 28.30 P
ATOM 3 OP1 U A 538 -77.710-109.389 -4.327 1.00 60.40 O
ATOM 4 OP2 U A 538 -75.152-109.169 -4.290 1.00 60.40 O
ATOM 5 O5' U A 538 -76.654-107.212 -3.813 1.00 46.43 O
ATOM 6 C5' U A 538 -76.325-106.509 -5.003 1.00 46.43 C
ATOM 7 C4' U A 538 -75.879-105.108 -4.684 1.00 46.43 C
ATOM 8 O4' U A 538 -74.931-105.106 -3.586 1.00 46.43 O
ATOM 9 C3' U A 538 -75.138-104.490 -5.850 1.00 46.43 C
ATOM 10 O3' U A 538 -76.082-103.968 -6.772 1.00 46.43 O
ATOM 11 C2' U A 538 -74.228-103.471 -5.177 1.00 46.43 C
ATOM 12 O2' U A 538 -74.884-102.254 -4.898 1.00 46.43 O
ATOM 13 C1' U A 538 -73.902-104.169 -3.850 1.00 46.43 C
ATOM 14 N1 U A 538 -72.597-104.859 -3.797 1.00 29.69 N
ATOM 15 C2 U A 538 -71.458-104.076 -3.850 1.00 29.69 C
ATOM 16 O2 U A 538 -71.495-102.857 -3.966 1.00 29.69 O
ATOM 17 N3 U A 538 -70.271-104.766 -3.764 1.00 29.69 N
ATOM 18 C4 U A 538 -70.102-106.119 -3.630 1.00 29.69 C
ATOM 19 O4 U A 538 -68.973-106.561 -3.418 1.00 29.69 O
ATOM 20 C5 U A 538 -71.313-106.868 -3.602 1.00 29.69 C
ATOM 21 C6 U A 538 -72.491-106.231 -3.683 1.00 29.69 C
ATOM 22 P A A 539 -76.067-104.477 -8.302 1.00 46.76 P
ATOM 23 OP1 A A 539 -77.462-104.355 -8.825 1.00 64.69 O
ATOM 24 OP2 A A 539 -75.351-105.774 -8.420 1.00 65.00 O
ATOM 25 O5' A A 539 -75.160-103.377 -9.010 1.00 16.77 O
TER
ATOM 1 O3' U B 538 -76.082-103.968 -6.772 1.00 46.43 O
ATOM 2 P A B 539 -76.067-104.477 -8.302 1.00 46.76 P
ATOM 3 OP1 A B 539 -77.462-104.355 -8.825 1.00 64.69 O
ATOM 4 OP2 A B 539 -75.351-105.774 -8.420 1.00 65.00 O
ATOM 5 O5' A B 539 -75.160-103.377 -9.010 1.00 16.77 O
ATOM 6 C5' A B 539 -75.449-101.977 -8.801 1.00 16.77 C
ATOM 7 C4' A B 539 -74.683-101.127 -9.767 1.00 16.77 C
ATOM 8 O4' A B 539 -73.295-101.115 -9.391 1.00 16.77 O
ATOM 9 C3' A B 539 -74.703-101.619 -11.193 1.00 16.77 C
ATOM 10 O3' A B 539 -75.920-101.165 -11.819 1.00 16.77 O
ATOM 11 C2' A B 539 -73.419-101.008 -11.765 1.00 16.77 C
ATOM 12 O2' A B 539 -73.618 -99.703 -12.244 1.00 16.77 O
ATOM 13 C1' A B 539 -72.516-100.882 -10.529 1.00 16.77 C
ATOM 14 N9 A B 539 -71.318-101.717 -10.444 1.00 19.49 N
ATOM 15 C8 A B 539 -71.255-103.068 -10.309 1.00 19.56 C
ATOM 16 N7 A B 539 -70.035-103.539 -10.259 1.00 19.57 N
ATOM 17 C5 A B 539 -69.240-102.420 -10.374 1.00 19.64 C
ATOM 18 C6 A B 539 -67.850-102.257 -10.406 1.00 19.59 C
ATOM 19 N6 A B 539 -66.986-103.264 -10.356 1.00 19.60 N
ATOM 20 N1 A B 539 -67.368-101.007 -10.507 1.00 19.57 N
ATOM 21 C2 A B 539 -68.240-100.000 -10.589 1.00 19.56 C
ATOM 22 N3 A B 539 -69.574-100.029 -10.586 1.00 19.69 N
ATOM 23 C4 A B 539 -70.014-101.287 -10.475 1.00 19.65 C
ATOM 24 P C B 540 -76.970-102.234 -12.442 1.00 3.60 P
ATOM 25 OP1 C B 540 -77.279-103.258 -11.411 1.00 33.94 O
ATOM 26 OP2 C B 540 -76.416-102.652 -13.755 1.00 33.82 O
ATOM 27 O5' C B 540 -78.323-101.431 -12.702 1.00 39.21 O
TER
Atoms:
C4: (-70.102,-106.119,-3.630)
N3: (-70.271,-104.766,-3.764)
OP1: (-77.710,-109.389,-4.327)
OP2: (-75.152,-109.169,-4.290)
C2: (-71.458,-104.076,-3.850)
C1': (-73.902,-104.169,-3.850)
C3': (-75.138,-104.490,-5.850)
O5': (-76.654,-107.212,-3.813)
O4': (-74.931,-105.106,-3.586)
C5': (-76.325,-106.509,-5.003)
P: (-76.485,-108.791,-3.742)
C4': (-75.879,-105.108,-4.684)
C2': (-74.228,-103.471,-5.177)
O2': (-74.884,-102.254,-4.898)
N1: (-72.597,-104.859,-3.797)
O4: (-68.973,-106.561,-3.418)
O2: (-71.495,-102.857,-3.966)
C6: (-72.491,-106.231,-3.683)
C5: (-71.313,-106.868,-3.602)
O3': (-76.082,-103.968,-6.772)
N3: (-70.271,-104.766,-3.764)
OP1: (-77.710,-109.389,-4.327)
OP2: (-75.152,-109.169,-4.290)
C2: (-71.458,-104.076,-3.850)
C1': (-73.902,-104.169,-3.850)
C3': (-75.138,-104.490,-5.850)
O5': (-76.654,-107.212,-3.813)
O4': (-74.931,-105.106,-3.586)
C5': (-76.325,-106.509,-5.003)
P: (-76.485,-108.791,-3.742)
C4': (-75.879,-105.108,-4.684)
C2': (-74.228,-103.471,-5.177)
O2': (-74.884,-102.254,-4.898)
N1: (-72.597,-104.859,-3.797)
O4: (-68.973,-106.561,-3.418)
O2: (-71.495,-102.857,-3.966)
C6: (-72.491,-106.231,-3.683)
C5: (-71.313,-106.868,-3.602)
O3': (-76.082,-103.968,-6.772)
OP1: (-77.462,-104.355,-8.825)
OP2: (-75.351,-105.774,-8.420)
C3': (-74.703,-101.619,-11.193)
C1': (-72.516,-100.882,-10.529)
C5': (-75.449,-101.977,-8.801)
O4': (-73.295,-101.115,-9.391)
C8: (-71.255,-103.068,-10.309)
O2': (-73.618,-99.703,-12.244)
C6: (-67.850,-102.257,-10.406)
C5: (-69.240,-102.420,-10.374)
C4: (-70.014,-101.287,-10.475)
P: (-76.067,-104.477,-8.302)
C4': (-74.683,-101.127,-9.767)
C2': (-73.419,-101.008,-11.765)
C2: (-68.240,-100.000,-10.589)
N1: (-67.368,-101.007,-10.507)
N3: (-69.574,-100.029,-10.586)
N6: (-66.986,-103.264,-10.356)
N7: (-70.035,-103.539,-10.259)
N9: (-71.318,-101.717,-10.444)
O5': (-75.160,-103.377,-9.010)
O3': (-75.920,-101.165,-11.819)
OP2: (-75.351,-105.774,-8.420)
C3': (-74.703,-101.619,-11.193)
C1': (-72.516,-100.882,-10.529)
C5': (-75.449,-101.977,-8.801)
O4': (-73.295,-101.115,-9.391)
C8: (-71.255,-103.068,-10.309)
O2': (-73.618,-99.703,-12.244)
C6: (-67.850,-102.257,-10.406)
C5: (-69.240,-102.420,-10.374)
C4: (-70.014,-101.287,-10.475)
P: (-76.067,-104.477,-8.302)
C4': (-74.683,-101.127,-9.767)
C2': (-73.419,-101.008,-11.765)
C2: (-68.240,-100.000,-10.589)
N1: (-67.368,-101.007,-10.507)
N3: (-69.574,-100.029,-10.586)
N6: (-66.986,-103.264,-10.356)
N7: (-70.035,-103.539,-10.259)
N9: (-71.318,-101.717,-10.444)
O5': (-75.160,-103.377,-9.010)
O3': (-75.920,-101.165,-11.819)
Image (generated by PyMOL):