ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J03:A305:A306

Extra

PDB:
ATOM 1 O3' C A 304 -45.386 -81.978 74.518 1.00 77.38 O
ATOM 2 P U A 305 -44.536 -83.153 73.831 1.00 36.21 P
ATOM 3 OP1 U A 305 -45.176 -83.467 72.533 1.00106.23 O
ATOM 4 OP2 U A 305 -44.331 -84.233 74.829 1.00106.50 O
ATOM 5 O5' U A 305 -43.136 -82.442 73.567 1.00 23.59 O
ATOM 6 C5' U A 305 -43.096 -81.183 72.885 1.00 23.59 C
ATOM 7 C4' U A 305 -41.731 -80.573 72.987 1.00 23.59 C
ATOM 8 O4' U A 305 -41.510 -80.012 74.300 1.00 23.59 O
ATOM 9 C3' U A 305 -40.582 -81.536 72.800 1.00 23.59 C
ATOM 10 O3' U A 305 -40.380 -81.816 71.436 1.00 23.59 O
ATOM 11 C2' U A 305 -39.419 -80.813 73.471 1.00 23.59 C
ATOM 12 O2' U A 305 -38.797 -79.834 72.648 1.00 23.59 O
ATOM 13 C1' U A 305 -40.134 -80.123 74.631 1.00 23.59 C
ATOM 14 N1 U A 305 -40.006 -80.854 75.898 1.00 24.11 N
ATOM 15 C2 U A 305 -38.838 -80.676 76.607 1.00 24.11 C
ATOM 16 O2 U A 305 -37.913 -79.993 76.199 1.00 24.11 O
ATOM 17 N3 U A 305 -38.782 -81.331 77.807 1.00 24.11 N
ATOM 18 C4 U A 305 -39.744 -82.143 78.347 1.00 24.11 C
ATOM 19 O4 U A 305 -39.537 -82.674 79.440 1.00 24.11 O
ATOM 20 C5 U A 305 -40.918 -82.299 77.538 1.00 24.11 C
ATOM 21 C6 U A 305 -41.004 -81.665 76.371 1.00 24.11 C
ATOM 22 P A A 306 -40.467 -83.336 70.937 1.00 57.53 P
ATOM 23 OP1 A A 306 -39.682 -83.439 69.675 1.00 68.15 O
ATOM 24 OP2 A A 306 -41.897 -83.725 70.952 1.00 68.15 O
ATOM 25 O5' A A 306 -39.705 -84.132 72.091 1.00 53.10 O
TER

ATOM 1 O3' U B 305 -40.380 -81.816 71.436 1.00 23.59 O
ATOM 2 P A B 306 -40.467 -83.336 70.937 1.00 57.53 P
ATOM 3 OP1 A B 306 -39.682 -83.439 69.675 1.00 68.15 O
ATOM 4 OP2 A B 306 -41.897 -83.725 70.952 1.00 68.15 O
ATOM 5 O5' A B 306 -39.705 -84.132 72.091 1.00 53.10 O
ATOM 6 C5' A B 306 -39.593 -85.563 72.057 1.00 53.10 C
ATOM 7 C4' A B 306 -38.175 -85.959 71.744 1.00 53.10 C
ATOM 8 O4' A B 306 -37.291 -85.509 72.796 1.00 53.10 O
ATOM 9 C3' A B 306 -37.935 -87.450 71.648 1.00 53.10 C
ATOM 10 O3' A B 306 -38.260 -87.902 70.334 1.00 53.10 O
ATOM 11 C2' A B 306 -36.448 -87.579 71.970 1.00 53.10 C
ATOM 12 O2' A B 306 -35.604 -87.360 70.865 1.00 53.10 O
ATOM 13 C1' A B 306 -36.238 -86.441 72.967 1.00 53.10 C
ATOM 14 N9 A B 306 -36.243 -86.893 74.355 1.00 13.85 N
ATOM 15 C8 A B 306 -37.262 -87.539 75.015 1.00 13.85 C
ATOM 16 N7 A B 306 -36.980 -87.839 76.261 1.00 13.85 N
ATOM 17 C5 A B 306 -35.692 -87.357 76.435 1.00 13.85 C
ATOM 18 C6 A B 306 -34.829 -87.370 77.538 1.00 13.85 C
ATOM 19 N6 A B 306 -35.149 -87.906 78.717 1.00 13.85 N
ATOM 20 N1 A B 306 -33.614 -86.806 77.385 1.00 13.85 N
ATOM 21 C2 A B 306 -33.305 -86.260 76.195 1.00 13.85 C
ATOM 22 N3 A B 306 -34.034 -86.188 75.085 1.00 13.85 N
ATOM 23 C4 A B 306 -35.228 -86.764 75.271 1.00 13.85 C
ATOM 24 P G B 307 -38.609 -89.453 70.086 1.00 64.62 P
ATOM 25 OP1 G B 307 -38.569 -89.667 68.627 1.00 56.40 O
ATOM 26 OP2 G B 307 -39.847 -89.808 70.840 1.00 56.40 O
ATOM 27 O5' G B 307 -37.351 -90.184 70.735 1.00 92.60 O
TER

Atoms:
C4: (-39.744,-82.143,78.347)
N3: (-38.782,-81.331,77.807)
OP1: (-45.176,-83.467,72.533)
OP2: (-44.331,-84.233,74.829)
C2: (-38.838,-80.676,76.607)
C1': (-40.134,-80.123,74.631)
C3': (-40.582,-81.536,72.800)
O5': (-43.136,-82.442,73.567)
O4': (-41.510,-80.012,74.300)
C5': (-43.096,-81.183,72.885)
P: (-44.536,-83.153,73.831)
C4': (-41.731,-80.573,72.987)
C2': (-39.419,-80.813,73.471)
O2': (-38.797,-79.834,72.648)
N1: (-40.006,-80.854,75.898)
O4: (-39.537,-82.674,79.440)
O2: (-37.913,-79.993,76.199)
C6: (-41.004,-81.665,76.371)
C5: (-40.918,-82.299,77.538)
O3': (-40.380,-81.816,71.436)
OP1: (-39.682,-83.439,69.675)
OP2: (-41.897,-83.725,70.952)
C3': (-37.935,-87.450,71.648)
C1': (-36.238,-86.441,72.967)
C5': (-39.593,-85.563,72.057)
O4': (-37.291,-85.509,72.796)
C8: (-37.262,-87.539,75.015)
O2': (-35.604,-87.360,70.865)
C6: (-34.829,-87.370,77.538)
C5: (-35.692,-87.357,76.435)
C4: (-35.228,-86.764,75.271)
P: (-40.467,-83.336,70.937)
C4': (-38.175,-85.959,71.744)
C2': (-36.448,-87.579,71.970)
C2: (-33.305,-86.260,76.195)
N1: (-33.614,-86.806,77.385)
N3: (-34.034,-86.188,75.085)
N6: (-35.149,-87.906,78.717)
N7: (-36.980,-87.839,76.261)
N9: (-36.243,-86.893,74.355)
O5': (-39.705,-84.132,72.091)
O3': (-38.260,-87.902,70.334)
Image (generated by PyMOL):
PyMOL image
show in jmol