Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J03:A52:A53
Extra
PDB:
ATOM 1 O3' G A 51 -20.915 -68.466 45.996 1.00 38.93 O
ATOM 2 P U A 52 -20.391 -69.993 45.892 1.00 17.90 P
ATOM 3 OP1 U A 52 -19.087 -70.028 45.167 1.00 17.27 O
ATOM 4 OP2 U A 52 -21.514 -70.877 45.459 1.00 17.22 O
ATOM 5 O5' U A 52 -20.051 -70.352 47.392 1.00 6.93 O
ATOM 6 C5' U A 52 -19.904 -71.694 47.760 1.00 6.93 C
ATOM 7 C4' U A 52 -20.334 -71.902 49.178 1.00 6.93 C
ATOM 8 O4' U A 52 -21.595 -71.255 49.433 1.00 6.93 O
ATOM 9 C3' U A 52 -20.584 -73.368 49.413 1.00 6.93 C
ATOM 10 O3' U A 52 -19.354 -73.988 49.716 1.00 6.93 O
ATOM 11 C2' U A 52 -21.618 -73.374 50.520 1.00 6.93 C
ATOM 12 O2' U A 52 -21.048 -73.292 51.799 1.00 6.93 O
ATOM 13 C1' U A 52 -22.408 -72.102 50.210 1.00 6.93 C
ATOM 14 N1 U A 52 -23.650 -72.348 49.468 1.00 25.58 N
ATOM 15 C2 U A 52 -24.661 -73.018 50.127 1.00 25.99 C
ATOM 16 O2 U A 52 -24.531 -73.464 51.255 1.00 26.08 O
ATOM 17 N3 U A 52 -25.826 -73.155 49.420 1.00 26.16 N
ATOM 18 C4 U A 52 -26.083 -72.714 48.145 1.00 25.88 C
ATOM 19 O4 U A 52 -27.237 -72.784 47.704 1.00 25.77 O
ATOM 20 C5 U A 52 -24.972 -72.070 47.506 1.00 25.94 C
ATOM 21 C6 U A 52 -23.821 -71.914 48.173 1.00 25.75 C
ATOM 22 P G A 53 -18.615 -74.856 48.579 1.00 23.87 P
ATOM 23 OP1 G A 53 -17.159 -74.861 48.948 1.00 10.84 O
ATOM 24 OP2 G A 53 -19.029 -74.432 47.212 1.00 10.84 O
ATOM 25 O5' G A 53 -19.253 -76.298 48.783 1.00 23.06 O
TER
ATOM 1 O3' U B 52 -19.354 -73.988 49.716 1.00 6.93 O
ATOM 2 P G B 53 -18.615 -74.856 48.579 1.00 23.87 P
ATOM 3 OP1 G B 53 -17.159 -74.861 48.948 1.00 10.84 O
ATOM 4 OP2 G B 53 -19.029 -74.432 47.212 1.00 10.84 O
ATOM 5 O5' G B 53 -19.253 -76.298 48.783 1.00 23.06 O
ATOM 6 C5' G B 53 -19.442 -76.846 50.104 1.00 23.06 C
ATOM 7 C4' G B 53 -19.562 -78.349 50.024 1.00 23.06 C
ATOM 8 O4' G B 53 -20.899 -78.720 49.588 1.00 23.06 O
ATOM 9 C3' G B 53 -18.581 -79.002 49.055 1.00 23.06 C
ATOM 10 O3' G B 53 -18.074 -80.214 49.597 1.00 23.06 O
ATOM 11 C2' G B 53 -19.442 -79.271 47.822 1.00 23.06 C
ATOM 12 O2' G B 53 -18.971 -80.358 47.047 1.00 23.06 O
ATOM 13 C1' G B 53 -20.808 -79.551 48.455 1.00 23.06 C
ATOM 14 N9 G B 53 -21.983 -79.318 47.617 1.00 8.63 N
ATOM 15 C8 G B 53 -22.050 -78.648 46.418 1.00 8.63 C
ATOM 16 N7 G B 53 -23.249 -78.652 45.897 1.00 8.63 N
ATOM 17 C5 G B 53 -24.022 -79.358 46.809 1.00 8.63 C
ATOM 18 C6 G B 53 -25.401 -79.706 46.779 1.00 8.63 C
ATOM 19 O6 G B 53 -26.248 -79.448 45.919 1.00 8.63 O
ATOM 20 N1 G B 53 -25.769 -80.429 47.900 1.00 8.63 N
ATOM 21 C2 G B 53 -24.932 -80.777 48.921 1.00 8.63 C
ATOM 22 N2 G B 53 -25.495 -81.464 49.923 1.00 8.63 N
ATOM 23 N3 G B 53 -23.646 -80.470 48.964 1.00 8.63 N
ATOM 24 C4 G B 53 -23.261 -79.766 47.881 1.00 8.63 C
ATOM 25 P G B 54 -16.491 -80.435 49.693 1.00 63.19 P
ATOM 26 OP1 G B 54 -16.288 -81.837 50.084 1.00 44.53 O
ATOM 27 OP2 G B 54 -15.908 -79.355 50.525 1.00 44.53 O
ATOM 28 O5' G B 54 -15.980 -80.274 48.196 1.00 37.38 O
TER
ATOM 2 P U A 52 -20.391 -69.993 45.892 1.00 17.90 P
ATOM 3 OP1 U A 52 -19.087 -70.028 45.167 1.00 17.27 O
ATOM 4 OP2 U A 52 -21.514 -70.877 45.459 1.00 17.22 O
ATOM 5 O5' U A 52 -20.051 -70.352 47.392 1.00 6.93 O
ATOM 6 C5' U A 52 -19.904 -71.694 47.760 1.00 6.93 C
ATOM 7 C4' U A 52 -20.334 -71.902 49.178 1.00 6.93 C
ATOM 8 O4' U A 52 -21.595 -71.255 49.433 1.00 6.93 O
ATOM 9 C3' U A 52 -20.584 -73.368 49.413 1.00 6.93 C
ATOM 10 O3' U A 52 -19.354 -73.988 49.716 1.00 6.93 O
ATOM 11 C2' U A 52 -21.618 -73.374 50.520 1.00 6.93 C
ATOM 12 O2' U A 52 -21.048 -73.292 51.799 1.00 6.93 O
ATOM 13 C1' U A 52 -22.408 -72.102 50.210 1.00 6.93 C
ATOM 14 N1 U A 52 -23.650 -72.348 49.468 1.00 25.58 N
ATOM 15 C2 U A 52 -24.661 -73.018 50.127 1.00 25.99 C
ATOM 16 O2 U A 52 -24.531 -73.464 51.255 1.00 26.08 O
ATOM 17 N3 U A 52 -25.826 -73.155 49.420 1.00 26.16 N
ATOM 18 C4 U A 52 -26.083 -72.714 48.145 1.00 25.88 C
ATOM 19 O4 U A 52 -27.237 -72.784 47.704 1.00 25.77 O
ATOM 20 C5 U A 52 -24.972 -72.070 47.506 1.00 25.94 C
ATOM 21 C6 U A 52 -23.821 -71.914 48.173 1.00 25.75 C
ATOM 22 P G A 53 -18.615 -74.856 48.579 1.00 23.87 P
ATOM 23 OP1 G A 53 -17.159 -74.861 48.948 1.00 10.84 O
ATOM 24 OP2 G A 53 -19.029 -74.432 47.212 1.00 10.84 O
ATOM 25 O5' G A 53 -19.253 -76.298 48.783 1.00 23.06 O
TER
ATOM 1 O3' U B 52 -19.354 -73.988 49.716 1.00 6.93 O
ATOM 2 P G B 53 -18.615 -74.856 48.579 1.00 23.87 P
ATOM 3 OP1 G B 53 -17.159 -74.861 48.948 1.00 10.84 O
ATOM 4 OP2 G B 53 -19.029 -74.432 47.212 1.00 10.84 O
ATOM 5 O5' G B 53 -19.253 -76.298 48.783 1.00 23.06 O
ATOM 6 C5' G B 53 -19.442 -76.846 50.104 1.00 23.06 C
ATOM 7 C4' G B 53 -19.562 -78.349 50.024 1.00 23.06 C
ATOM 8 O4' G B 53 -20.899 -78.720 49.588 1.00 23.06 O
ATOM 9 C3' G B 53 -18.581 -79.002 49.055 1.00 23.06 C
ATOM 10 O3' G B 53 -18.074 -80.214 49.597 1.00 23.06 O
ATOM 11 C2' G B 53 -19.442 -79.271 47.822 1.00 23.06 C
ATOM 12 O2' G B 53 -18.971 -80.358 47.047 1.00 23.06 O
ATOM 13 C1' G B 53 -20.808 -79.551 48.455 1.00 23.06 C
ATOM 14 N9 G B 53 -21.983 -79.318 47.617 1.00 8.63 N
ATOM 15 C8 G B 53 -22.050 -78.648 46.418 1.00 8.63 C
ATOM 16 N7 G B 53 -23.249 -78.652 45.897 1.00 8.63 N
ATOM 17 C5 G B 53 -24.022 -79.358 46.809 1.00 8.63 C
ATOM 18 C6 G B 53 -25.401 -79.706 46.779 1.00 8.63 C
ATOM 19 O6 G B 53 -26.248 -79.448 45.919 1.00 8.63 O
ATOM 20 N1 G B 53 -25.769 -80.429 47.900 1.00 8.63 N
ATOM 21 C2 G B 53 -24.932 -80.777 48.921 1.00 8.63 C
ATOM 22 N2 G B 53 -25.495 -81.464 49.923 1.00 8.63 N
ATOM 23 N3 G B 53 -23.646 -80.470 48.964 1.00 8.63 N
ATOM 24 C4 G B 53 -23.261 -79.766 47.881 1.00 8.63 C
ATOM 25 P G B 54 -16.491 -80.435 49.693 1.00 63.19 P
ATOM 26 OP1 G B 54 -16.288 -81.837 50.084 1.00 44.53 O
ATOM 27 OP2 G B 54 -15.908 -79.355 50.525 1.00 44.53 O
ATOM 28 O5' G B 54 -15.980 -80.274 48.196 1.00 37.38 O
TER
Atoms:
C4: (-26.083,-72.714,48.145)
N3: (-25.826,-73.155,49.420)
OP1: (-19.087,-70.028,45.167)
OP2: (-21.514,-70.877,45.459)
C2: (-24.661,-73.018,50.127)
C1': (-22.408,-72.102,50.210)
C3': (-20.584,-73.368,49.413)
O5': (-20.051,-70.352,47.392)
O4': (-21.595,-71.255,49.433)
C5': (-19.904,-71.694,47.760)
P: (-20.391,-69.993,45.892)
C4': (-20.334,-71.902,49.178)
C2': (-21.618,-73.374,50.520)
O2': (-21.048,-73.292,51.799)
N1: (-23.650,-72.348,49.468)
O4: (-27.237,-72.784,47.704)
O2: (-24.531,-73.464,51.255)
C6: (-23.821,-71.914,48.173)
C5: (-24.972,-72.070,47.506)
O3': (-19.354,-73.988,49.716)
N3: (-25.826,-73.155,49.420)
OP1: (-19.087,-70.028,45.167)
OP2: (-21.514,-70.877,45.459)
C2: (-24.661,-73.018,50.127)
C1': (-22.408,-72.102,50.210)
C3': (-20.584,-73.368,49.413)
O5': (-20.051,-70.352,47.392)
O4': (-21.595,-71.255,49.433)
C5': (-19.904,-71.694,47.760)
P: (-20.391,-69.993,45.892)
C4': (-20.334,-71.902,49.178)
C2': (-21.618,-73.374,50.520)
O2': (-21.048,-73.292,51.799)
N1: (-23.650,-72.348,49.468)
O4: (-27.237,-72.784,47.704)
O2: (-24.531,-73.464,51.255)
C6: (-23.821,-71.914,48.173)
C5: (-24.972,-72.070,47.506)
O3': (-19.354,-73.988,49.716)
OP1: (-17.159,-74.861,48.948)
OP2: (-19.029,-74.432,47.212)
C3': (-18.581,-79.002,49.055)
C1': (-20.808,-79.551,48.455)
C5': (-19.442,-76.846,50.104)
O6: (-26.248,-79.448,45.919)
O4': (-20.899,-78.720,49.588)
C8: (-22.050,-78.648,46.418)
C2: (-24.932,-80.777,48.921)
C6: (-25.401,-79.706,46.779)
C5: (-24.022,-79.358,46.809)
C4: (-23.261,-79.766,47.881)
P: (-18.615,-74.856,48.579)
C4': (-19.562,-78.349,50.024)
C2': (-19.442,-79.271,47.822)
O2': (-18.971,-80.358,47.047)
N1: (-25.769,-80.429,47.900)
N2: (-25.495,-81.464,49.923)
N3: (-23.646,-80.470,48.964)
N7: (-23.249,-78.652,45.897)
N9: (-21.983,-79.318,47.617)
O5': (-19.253,-76.298,48.783)
O3': (-18.074,-80.214,49.597)
OP2: (-19.029,-74.432,47.212)
C3': (-18.581,-79.002,49.055)
C1': (-20.808,-79.551,48.455)
C5': (-19.442,-76.846,50.104)
O6: (-26.248,-79.448,45.919)
O4': (-20.899,-78.720,49.588)
C8: (-22.050,-78.648,46.418)
C2: (-24.932,-80.777,48.921)
C6: (-25.401,-79.706,46.779)
C5: (-24.022,-79.358,46.809)
C4: (-23.261,-79.766,47.881)
P: (-18.615,-74.856,48.579)
C4': (-19.562,-78.349,50.024)
C2': (-19.442,-79.271,47.822)
O2': (-18.971,-80.358,47.047)
N1: (-25.769,-80.429,47.900)
N2: (-25.495,-81.464,49.923)
N3: (-23.646,-80.470,48.964)
N7: (-23.249,-78.652,45.897)
N9: (-21.983,-79.318,47.617)
O5': (-19.253,-76.298,48.783)
O3': (-18.074,-80.214,49.597)
Image (generated by PyMOL):