ClaRNA

Doublet info:

Details

Nucleotide types: CA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2NZ4:Q121:Q122

Extra

PDB:
ATOM 1 O3' A A 120 -5.696 30.869 39.772 1.00 55.65 O
ATOM 2 P C A 121 -5.707 32.430 39.458 1.00 56.45 P
ATOM 3 OP1 C A 121 -6.972 32.978 39.989 1.00 56.02 O
ATOM 4 OP2 C A 121 -5.304 32.653 38.047 1.00 55.60 O
ATOM 5 O5' C A 121 -4.551 32.966 40.409 1.00 54.25 O
ATOM 6 C5' C A 121 -4.674 32.878 41.806 1.00 53.21 C
ATOM 7 C4' C A 121 -3.303 32.919 42.455 1.00 51.76 C
ATOM 8 O4' C A 121 -2.468 31.846 41.960 1.00 50.52 O
ATOM 9 C3' C A 121 -2.485 34.162 42.152 1.00 50.17 C
ATOM 10 O3' C A 121 -2.946 35.238 42.912 1.00 47.53 O
ATOM 11 C2' C A 121 -1.116 33.668 42.578 1.00 50.16 C
ATOM 12 O2' C A 121 -0.984 33.528 43.971 1.00 50.43 O
ATOM 13 C1' C A 121 -1.123 32.293 41.937 1.00 49.82 C
ATOM 14 N1 C A 121 -0.571 32.284 40.548 1.00 49.52 N
ATOM 15 C2 C A 121 0.814 32.177 40.399 1.00 49.89 C
ATOM 16 O2 C A 121 1.502 32.103 41.418 1.00 50.44 O
ATOM 17 N3 C A 121 1.361 32.152 39.152 1.00 49.74 N
ATOM 18 C4 C A 121 0.576 32.232 38.068 1.00 48.86 C
ATOM 19 N4 C A 121 1.156 32.213 36.869 1.00 48.78 N
ATOM 20 C5 C A 121 -0.836 32.351 38.188 1.00 48.13 C
ATOM 21 C6 C A 121 -1.358 32.378 39.430 1.00 48.96 C
ATOM 22 P A A 122 -2.811 36.714 42.333 1.00 48.98 P
ATOM 23 OP1 A A 122 -3.446 37.661 43.274 1.00 47.63 O
ATOM 24 OP2 A A 122 -3.101 36.765 40.882 1.00 47.27 O
ATOM 25 O5' A A 122 -1.226 36.913 42.463 1.00 49.15 O
TER

ATOM 1 O3' C B 121 -2.946 35.238 42.912 1.00 47.53 O
ATOM 2 P A B 122 -2.811 36.714 42.333 1.00 48.98 P
ATOM 3 OP1 A B 122 -3.446 37.661 43.274 1.00 47.63 O
ATOM 4 OP2 A B 122 -3.101 36.765 40.882 1.00 47.27 O
ATOM 5 O5' A B 122 -1.226 36.913 42.463 1.00 49.15 O
ATOM 6 C5' A B 122 -0.650 38.172 42.143 1.00 46.77 C
ATOM 7 C4' A B 122 0.758 38.256 42.687 1.00 46.39 C
ATOM 8 O4' A B 122 1.643 37.551 41.790 1.00 45.68 O
ATOM 9 C3' A B 122 1.335 39.655 42.745 1.00 45.49 C
ATOM 10 O3' A B 122 0.935 40.292 43.933 1.00 48.39 O
ATOM 11 C2' A B 122 2.834 39.398 42.660 1.00 44.25 C
ATOM 12 O2' A B 122 3.455 38.997 43.858 1.00 42.42 O
ATOM 13 C1' A B 122 2.882 38.235 41.696 1.00 41.52 C
ATOM 14 N9 A B 122 3.095 38.511 40.284 1.00 40.62 N
ATOM 15 C8 A B 122 2.172 38.547 39.270 1.00 39.47 C
ATOM 16 N7 A B 122 2.709 38.769 38.089 1.00 38.98 N
ATOM 17 C5 A B 122 4.070 38.893 38.357 1.00 38.52 C
ATOM 18 C6 A B 122 5.208 39.116 37.552 1.00 38.16 C
ATOM 19 N6 A B 122 5.149 39.286 36.236 1.00 39.08 N
ATOM 20 N1 A B 122 6.427 39.174 38.134 1.00 38.61 N
ATOM 21 C2 A B 122 6.507 39.005 39.457 1.00 39.71 C
ATOM 22 N3 A B 122 5.511 38.771 40.325 1.00 41.12 N
ATOM 23 C4 A B 122 4.314 38.721 39.702 1.00 39.93 C
ATOM 24 P A B 123 0.501 41.831 43.861 1.00 53.64 P
ATOM 25 OP1 A B 123 -0.112 42.205 45.161 1.00 51.29 O
ATOM 26 OP2 A B 123 -0.223 42.050 42.586 1.00 51.54 O
ATOM 27 O5' A B 123 1.964 42.488 43.772 1.00 51.87 O
TER

Atoms:
C2: (0.814,32.177,40.399)
OP1: (-6.972,32.978,39.989)
OP2: (-5.304,32.653,38.047)
C4: (0.576,32.232,38.068)
O5': (-4.551,32.966,40.409)
C3': (-2.485,34.162,42.152)
C1': (-1.123,32.293,41.937)
O4': (-2.468,31.846,41.960)
C5': (-4.674,32.878,41.806)
P: (-5.707,32.430,39.458)
O2: (1.502,32.103,41.418)
C4': (-3.303,32.919,42.455)
C2': (-1.116,33.668,42.578)
O2': (-0.984,33.528,43.971)
N1: (-0.571,32.284,40.548)
N3: (1.361,32.152,39.152)
N4: (1.156,32.213,36.869)
C6: (-1.358,32.378,39.430)
C5: (-0.836,32.351,38.188)
O3': (-2.946,35.238,42.912)
OP1: (-3.446,37.661,43.274)
OP2: (-3.101,36.765,40.882)
C3': (1.335,39.655,42.745)
C1': (2.882,38.235,41.696)
C5': (-0.650,38.172,42.143)
O4': (1.643,37.551,41.790)
C8: (2.172,38.547,39.270)
O2': (3.455,38.997,43.858)
C6: (5.208,39.116,37.552)
C5: (4.070,38.893,38.357)
C4: (4.314,38.721,39.702)
P: (-2.811,36.714,42.333)
C4': (0.758,38.256,42.687)
C2': (2.834,39.398,42.660)
C2: (6.507,39.005,39.457)
N1: (6.427,39.174,38.134)
N3: (5.511,38.771,40.325)
N6: (5.149,39.286,36.236)
N7: (2.709,38.769,38.089)
N9: (3.095,38.511,40.284)
O5': (-1.226,36.913,42.463)
O3': (0.935,40.292,43.933)
Image (generated by PyMOL):
PyMOL image
show in jmol