Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2R8S:R19:R20
Extra
PDB:
ATOM 1 O3' U A 18 38.164 -41.838 37.766 1.00 44.72 O
ATOM 2 P C A 19 37.078 -41.121 38.686 1.00 43.85 P
ATOM 3 OP1 C A 19 37.048 -41.853 39.968 1.00 42.48 O
ATOM 4 OP2 C A 19 35.861 -40.890 37.885 1.00 44.51 O
ATOM 5 O5' C A 19 37.703 -39.681 38.944 1.00 44.92 O
ATOM 6 C5' C A 19 38.645 -39.469 39.977 1.00 45.60 C
ATOM 7 C4' C A 19 39.030 -38.004 39.998 1.00 41.94 C
ATOM 8 O4' C A 19 39.468 -37.569 38.683 1.00 42.70 O
ATOM 9 C3' C A 19 37.884 -37.060 40.298 1.00 42.16 C
ATOM 10 O3' C A 19 37.584 -37.047 41.677 1.00 46.98 O
ATOM 11 C2' C A 19 38.488 -35.751 39.833 1.00 39.28 C
ATOM 12 O2' C A 19 39.438 -35.255 40.748 1.00 38.99 O
ATOM 13 C1' C A 19 39.117 -36.208 38.520 1.00 40.50 C
ATOM 14 N1 C A 19 38.172 -36.039 37.390 1.00 39.75 N
ATOM 15 C2 C A 19 38.097 -34.781 36.759 1.00 41.47 C
ATOM 16 O2 C A 19 38.821 -33.844 37.131 1.00 38.39 O
ATOM 17 N3 C A 19 37.229 -34.626 35.731 1.00 41.04 N
ATOM 18 C4 C A 19 36.454 -35.636 35.333 1.00 41.41 C
ATOM 19 N4 C A 19 35.627 -35.401 34.313 1.00 38.28 N
ATOM 20 C5 C A 19 36.513 -36.920 35.958 1.00 41.84 C
ATOM 21 C6 C A 19 37.373 -37.075 36.977 1.00 41.43 C
ATOM 22 P A A 20 36.075 -36.991 42.184 1.00 52.24 P
ATOM 23 OP1 A A 20 36.090 -37.557 43.549 1.00 54.31 O
ATOM 24 OP2 A A 20 35.175 -37.536 41.140 1.00 51.49 O
ATOM 25 O5' A A 20 35.770 -35.427 42.278 1.00 52.99 O
TER
ATOM 1 O3' C B 19 37.584 -37.047 41.677 1.00 46.98 O
ATOM 2 P A B 20 36.075 -36.991 42.184 1.00 52.24 P
ATOM 3 OP1 A B 20 36.090 -37.557 43.549 1.00 54.31 O
ATOM 4 OP2 A B 20 35.175 -37.536 41.140 1.00 51.49 O
ATOM 5 O5' A B 20 35.770 -35.427 42.278 1.00 52.99 O
ATOM 6 C5' A B 20 36.612 -34.612 43.049 1.00 56.41 C
ATOM 7 C4' A B 20 35.896 -33.330 43.392 1.00 57.53 C
ATOM 8 O4' A B 20 35.590 -32.621 42.178 1.00 57.25 O
ATOM 9 C3' A B 20 34.534 -33.540 44.036 1.00 60.68 C
ATOM 10 O3' A B 20 34.607 -33.807 45.462 1.00 65.33 O
ATOM 11 C2' A B 20 33.762 -32.271 43.639 1.00 59.73 C
ATOM 12 O2' A B 20 33.628 -31.339 44.691 1.00 63.06 O
ATOM 13 C1' A B 20 34.586 -31.679 42.486 1.00 55.48 C
ATOM 14 N9 A B 20 33.820 -31.435 41.267 1.00 52.46 N
ATOM 15 C8 A B 20 33.195 -32.369 40.483 1.00 51.90 C
ATOM 16 N7 A B 20 32.572 -31.861 39.443 1.00 52.04 N
ATOM 17 C5 A B 20 32.812 -30.500 39.551 1.00 50.48 C
ATOM 18 C6 A B 20 32.423 -29.399 38.759 1.00 51.70 C
ATOM 19 N6 A B 20 31.683 -29.512 37.650 1.00 52.19 N
ATOM 20 N1 A B 20 32.831 -28.171 39.148 1.00 52.47 N
ATOM 21 C2 A B 20 33.577 -28.053 40.259 1.00 52.53 C
ATOM 22 N3 A B 20 34.001 -29.009 41.089 1.00 51.27 N
ATOM 23 C4 A B 20 33.579 -30.220 40.673 1.00 51.56 C
ATOM 24 P A B 21 35.676 -33.210 46.500 1.00 68.38 P
ATOM 25 OP1 A B 21 35.183 -33.533 47.853 1.00 71.10 O
ATOM 26 OP2 A B 21 35.950 -31.802 46.116 1.00 69.95 O
ATOM 27 O5' A B 21 37.000 -34.078 46.295 1.00 63.14 O
TER
ATOM 2 P C A 19 37.078 -41.121 38.686 1.00 43.85 P
ATOM 3 OP1 C A 19 37.048 -41.853 39.968 1.00 42.48 O
ATOM 4 OP2 C A 19 35.861 -40.890 37.885 1.00 44.51 O
ATOM 5 O5' C A 19 37.703 -39.681 38.944 1.00 44.92 O
ATOM 6 C5' C A 19 38.645 -39.469 39.977 1.00 45.60 C
ATOM 7 C4' C A 19 39.030 -38.004 39.998 1.00 41.94 C
ATOM 8 O4' C A 19 39.468 -37.569 38.683 1.00 42.70 O
ATOM 9 C3' C A 19 37.884 -37.060 40.298 1.00 42.16 C
ATOM 10 O3' C A 19 37.584 -37.047 41.677 1.00 46.98 O
ATOM 11 C2' C A 19 38.488 -35.751 39.833 1.00 39.28 C
ATOM 12 O2' C A 19 39.438 -35.255 40.748 1.00 38.99 O
ATOM 13 C1' C A 19 39.117 -36.208 38.520 1.00 40.50 C
ATOM 14 N1 C A 19 38.172 -36.039 37.390 1.00 39.75 N
ATOM 15 C2 C A 19 38.097 -34.781 36.759 1.00 41.47 C
ATOM 16 O2 C A 19 38.821 -33.844 37.131 1.00 38.39 O
ATOM 17 N3 C A 19 37.229 -34.626 35.731 1.00 41.04 N
ATOM 18 C4 C A 19 36.454 -35.636 35.333 1.00 41.41 C
ATOM 19 N4 C A 19 35.627 -35.401 34.313 1.00 38.28 N
ATOM 20 C5 C A 19 36.513 -36.920 35.958 1.00 41.84 C
ATOM 21 C6 C A 19 37.373 -37.075 36.977 1.00 41.43 C
ATOM 22 P A A 20 36.075 -36.991 42.184 1.00 52.24 P
ATOM 23 OP1 A A 20 36.090 -37.557 43.549 1.00 54.31 O
ATOM 24 OP2 A A 20 35.175 -37.536 41.140 1.00 51.49 O
ATOM 25 O5' A A 20 35.770 -35.427 42.278 1.00 52.99 O
TER
ATOM 1 O3' C B 19 37.584 -37.047 41.677 1.00 46.98 O
ATOM 2 P A B 20 36.075 -36.991 42.184 1.00 52.24 P
ATOM 3 OP1 A B 20 36.090 -37.557 43.549 1.00 54.31 O
ATOM 4 OP2 A B 20 35.175 -37.536 41.140 1.00 51.49 O
ATOM 5 O5' A B 20 35.770 -35.427 42.278 1.00 52.99 O
ATOM 6 C5' A B 20 36.612 -34.612 43.049 1.00 56.41 C
ATOM 7 C4' A B 20 35.896 -33.330 43.392 1.00 57.53 C
ATOM 8 O4' A B 20 35.590 -32.621 42.178 1.00 57.25 O
ATOM 9 C3' A B 20 34.534 -33.540 44.036 1.00 60.68 C
ATOM 10 O3' A B 20 34.607 -33.807 45.462 1.00 65.33 O
ATOM 11 C2' A B 20 33.762 -32.271 43.639 1.00 59.73 C
ATOM 12 O2' A B 20 33.628 -31.339 44.691 1.00 63.06 O
ATOM 13 C1' A B 20 34.586 -31.679 42.486 1.00 55.48 C
ATOM 14 N9 A B 20 33.820 -31.435 41.267 1.00 52.46 N
ATOM 15 C8 A B 20 33.195 -32.369 40.483 1.00 51.90 C
ATOM 16 N7 A B 20 32.572 -31.861 39.443 1.00 52.04 N
ATOM 17 C5 A B 20 32.812 -30.500 39.551 1.00 50.48 C
ATOM 18 C6 A B 20 32.423 -29.399 38.759 1.00 51.70 C
ATOM 19 N6 A B 20 31.683 -29.512 37.650 1.00 52.19 N
ATOM 20 N1 A B 20 32.831 -28.171 39.148 1.00 52.47 N
ATOM 21 C2 A B 20 33.577 -28.053 40.259 1.00 52.53 C
ATOM 22 N3 A B 20 34.001 -29.009 41.089 1.00 51.27 N
ATOM 23 C4 A B 20 33.579 -30.220 40.673 1.00 51.56 C
ATOM 24 P A B 21 35.676 -33.210 46.500 1.00 68.38 P
ATOM 25 OP1 A B 21 35.183 -33.533 47.853 1.00 71.10 O
ATOM 26 OP2 A B 21 35.950 -31.802 46.116 1.00 69.95 O
ATOM 27 O5' A B 21 37.000 -34.078 46.295 1.00 63.14 O
TER
Atoms:
C2: (38.097,-34.781,36.759)
OP1: (37.048,-41.853,39.968)
OP2: (35.861,-40.890,37.885)
C4: (36.454,-35.636,35.333)
O5': (37.703,-39.681,38.944)
C3': (37.884,-37.060,40.298)
C1': (39.117,-36.208,38.520)
O4': (39.468,-37.569,38.683)
C5': (38.645,-39.469,39.977)
P: (37.078,-41.121,38.686)
O2: (38.821,-33.844,37.131)
C4': (39.030,-38.004,39.998)
C2': (38.488,-35.751,39.833)
O2': (39.438,-35.255,40.748)
N1: (38.172,-36.039,37.390)
N3: (37.229,-34.626,35.731)
N4: (35.627,-35.401,34.313)
C6: (37.373,-37.075,36.977)
C5: (36.513,-36.920,35.958)
O3': (37.584,-37.047,41.677)
OP1: (37.048,-41.853,39.968)
OP2: (35.861,-40.890,37.885)
C4: (36.454,-35.636,35.333)
O5': (37.703,-39.681,38.944)
C3': (37.884,-37.060,40.298)
C1': (39.117,-36.208,38.520)
O4': (39.468,-37.569,38.683)
C5': (38.645,-39.469,39.977)
P: (37.078,-41.121,38.686)
O2: (38.821,-33.844,37.131)
C4': (39.030,-38.004,39.998)
C2': (38.488,-35.751,39.833)
O2': (39.438,-35.255,40.748)
N1: (38.172,-36.039,37.390)
N3: (37.229,-34.626,35.731)
N4: (35.627,-35.401,34.313)
C6: (37.373,-37.075,36.977)
C5: (36.513,-36.920,35.958)
O3': (37.584,-37.047,41.677)
OP1: (36.090,-37.557,43.549)
OP2: (35.175,-37.536,41.140)
C3': (34.534,-33.540,44.036)
C1': (34.586,-31.679,42.486)
C5': (36.612,-34.612,43.049)
O4': (35.590,-32.621,42.178)
C8: (33.195,-32.369,40.483)
O2': (33.628,-31.339,44.691)
C6: (32.423,-29.399,38.759)
C5: (32.812,-30.500,39.551)
C4: (33.579,-30.220,40.673)
P: (36.075,-36.991,42.184)
C4': (35.896,-33.330,43.392)
C2': (33.762,-32.271,43.639)
C2: (33.577,-28.053,40.259)
N1: (32.831,-28.171,39.148)
N3: (34.001,-29.009,41.089)
N6: (31.683,-29.512,37.650)
N7: (32.572,-31.861,39.443)
N9: (33.820,-31.435,41.267)
O5': (35.770,-35.427,42.278)
O3': (34.607,-33.807,45.462)
OP2: (35.175,-37.536,41.140)
C3': (34.534,-33.540,44.036)
C1': (34.586,-31.679,42.486)
C5': (36.612,-34.612,43.049)
O4': (35.590,-32.621,42.178)
C8: (33.195,-32.369,40.483)
O2': (33.628,-31.339,44.691)
C6: (32.423,-29.399,38.759)
C5: (32.812,-30.500,39.551)
C4: (33.579,-30.220,40.673)
P: (36.075,-36.991,42.184)
C4': (35.896,-33.330,43.392)
C2': (33.762,-32.271,43.639)
C2: (33.577,-28.053,40.259)
N1: (32.831,-28.171,39.148)
N3: (34.001,-29.009,41.089)
N6: (31.683,-29.512,37.650)
N7: (32.572,-31.861,39.443)
N9: (33.820,-31.435,41.267)
O5': (35.770,-35.427,42.278)
O3': (34.607,-33.807,45.462)
Image (generated by PyMOL):