Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:970:9109
Extra
PDB:
ATOM 1 O3' U A 69 49.200 46.200 110.163 1.00 55.40 O
ATOM 2 P C A 70 48.379 47.400 110.845 1.00 57.59 P
ATOM 3 OP1 C A 70 47.966 48.322 109.756 1.00 57.28 O
ATOM 4 OP2 C A 70 49.160 47.920 112.000 1.00 57.18 O
ATOM 5 O5' C A 70 47.079 46.700 111.443 1.00 60.01 O
ATOM 6 C5' C A 70 46.041 46.201 110.586 1.00 62.57 C
ATOM 7 C4' C A 70 45.056 45.380 111.383 1.00 64.21 C
ATOM 8 O4' C A 70 45.780 44.311 112.048 1.00 64.51 O
ATOM 9 C3' C A 70 44.344 46.075 112.536 1.00 65.49 C
ATOM 10 O3' C A 70 43.228 46.862 112.124 1.00 67.64 O
ATOM 11 C2' C A 70 43.899 44.893 113.381 1.00 65.84 C
ATOM 12 O2' C A 70 42.749 44.254 112.862 1.00 66.72 O
ATOM 13 C1' C A 70 45.106 43.963 113.247 1.00 66.17 C
ATOM 14 N1 C A 70 46.032 44.082 114.387 1.00 67.11 N
ATOM 15 C2 C A 70 45.846 43.231 115.495 1.00 69.16 C
ATOM 16 O2 C A 70 44.934 42.375 115.463 1.00 69.56 O
ATOM 17 N3 C A 70 46.663 43.359 116.568 1.00 68.99 N
ATOM 18 C4 C A 70 47.633 44.274 116.563 1.00 67.48 C
ATOM 19 N4 C A 70 48.402 44.368 117.648 1.00 67.29 N
ATOM 20 C5 C A 70 47.855 45.133 115.446 1.00 67.12 C
ATOM 21 C6 C A 70 47.041 45.003 114.390 1.00 66.38 C
ATOM 22 P C A 71 42.602 47.948 113.135 1.00 68.39 P
ATOM 23 OP1 C A 71 41.482 48.610 112.426 1.00 67.75 O
ATOM 24 OP2 C A 71 43.708 48.770 113.686 1.00 67.97 O
ATOM 25 O5' C A 71 41.997 47.079 114.328 1.00 70.22 O
TER
ATOM 1 O3' G B 108 44.917 40.183 128.870 1.00 76.47 O
ATOM 2 P G B 109 45.392 38.874 128.067 1.00 76.81 P
ATOM 3 OP1 G B 109 45.025 37.706 128.912 1.00 77.03 O
ATOM 4 OP2 G B 109 46.804 39.045 127.610 1.00 75.18 O
ATOM 5 O5' G B 109 44.450 38.859 126.786 1.00 73.83 O
ATOM 6 C5' G B 109 44.857 38.206 125.583 1.00 71.35 C
ATOM 7 C4' G B 109 43.853 38.470 124.495 1.00 70.54 C
ATOM 8 O4' G B 109 43.677 39.903 124.326 1.00 71.00 O
ATOM 9 C3' G B 109 44.280 37.988 123.127 1.00 69.37 C
ATOM 10 O3' G B 109 44.038 36.608 122.951 1.00 67.09 O
ATOM 11 C2' G B 109 43.465 38.876 122.204 1.00 70.13 C
ATOM 12 O2' G B 109 42.117 38.460 122.105 1.00 70.49 O
ATOM 13 C1' G B 109 43.559 40.213 122.943 1.00 70.25 C
ATOM 14 N9 G B 109 44.750 40.967 122.553 1.00 70.25 N
ATOM 15 C8 G B 109 45.785 41.361 123.370 1.00 70.48 C
ATOM 16 N7 G B 109 46.738 41.983 122.729 1.00 70.60 N
ATOM 17 C5 G B 109 46.304 42.012 121.411 1.00 69.63 C
ATOM 18 C6 G B 109 46.925 42.544 120.254 1.00 68.90 C
ATOM 19 O6 G B 109 48.021 43.109 120.158 1.00 67.93 O
ATOM 20 N1 G B 109 46.138 42.358 119.124 1.00 68.89 N
ATOM 21 C2 G B 109 44.913 41.736 119.107 1.00 69.17 C
ATOM 22 N2 G B 109 44.305 41.655 117.913 1.00 69.02 N
ATOM 23 N3 G B 109 44.327 41.230 120.177 1.00 68.79 N
ATOM 24 C4 G B 109 45.072 41.401 121.286 1.00 69.56 C
ATOM 25 P U B 110 45.144 35.714 122.221 1.00 67.18 P
ATOM 26 OP1 U B 110 44.625 34.331 122.092 1.00 68.34 O
ATOM 27 OP2 U B 110 46.451 35.954 122.901 1.00 65.37 O
ATOM 28 O5' U B 110 45.198 36.340 120.760 1.00 66.29 O
TER
ATOM 2 P C A 70 48.379 47.400 110.845 1.00 57.59 P
ATOM 3 OP1 C A 70 47.966 48.322 109.756 1.00 57.28 O
ATOM 4 OP2 C A 70 49.160 47.920 112.000 1.00 57.18 O
ATOM 5 O5' C A 70 47.079 46.700 111.443 1.00 60.01 O
ATOM 6 C5' C A 70 46.041 46.201 110.586 1.00 62.57 C
ATOM 7 C4' C A 70 45.056 45.380 111.383 1.00 64.21 C
ATOM 8 O4' C A 70 45.780 44.311 112.048 1.00 64.51 O
ATOM 9 C3' C A 70 44.344 46.075 112.536 1.00 65.49 C
ATOM 10 O3' C A 70 43.228 46.862 112.124 1.00 67.64 O
ATOM 11 C2' C A 70 43.899 44.893 113.381 1.00 65.84 C
ATOM 12 O2' C A 70 42.749 44.254 112.862 1.00 66.72 O
ATOM 13 C1' C A 70 45.106 43.963 113.247 1.00 66.17 C
ATOM 14 N1 C A 70 46.032 44.082 114.387 1.00 67.11 N
ATOM 15 C2 C A 70 45.846 43.231 115.495 1.00 69.16 C
ATOM 16 O2 C A 70 44.934 42.375 115.463 1.00 69.56 O
ATOM 17 N3 C A 70 46.663 43.359 116.568 1.00 68.99 N
ATOM 18 C4 C A 70 47.633 44.274 116.563 1.00 67.48 C
ATOM 19 N4 C A 70 48.402 44.368 117.648 1.00 67.29 N
ATOM 20 C5 C A 70 47.855 45.133 115.446 1.00 67.12 C
ATOM 21 C6 C A 70 47.041 45.003 114.390 1.00 66.38 C
ATOM 22 P C A 71 42.602 47.948 113.135 1.00 68.39 P
ATOM 23 OP1 C A 71 41.482 48.610 112.426 1.00 67.75 O
ATOM 24 OP2 C A 71 43.708 48.770 113.686 1.00 67.97 O
ATOM 25 O5' C A 71 41.997 47.079 114.328 1.00 70.22 O
TER
ATOM 1 O3' G B 108 44.917 40.183 128.870 1.00 76.47 O
ATOM 2 P G B 109 45.392 38.874 128.067 1.00 76.81 P
ATOM 3 OP1 G B 109 45.025 37.706 128.912 1.00 77.03 O
ATOM 4 OP2 G B 109 46.804 39.045 127.610 1.00 75.18 O
ATOM 5 O5' G B 109 44.450 38.859 126.786 1.00 73.83 O
ATOM 6 C5' G B 109 44.857 38.206 125.583 1.00 71.35 C
ATOM 7 C4' G B 109 43.853 38.470 124.495 1.00 70.54 C
ATOM 8 O4' G B 109 43.677 39.903 124.326 1.00 71.00 O
ATOM 9 C3' G B 109 44.280 37.988 123.127 1.00 69.37 C
ATOM 10 O3' G B 109 44.038 36.608 122.951 1.00 67.09 O
ATOM 11 C2' G B 109 43.465 38.876 122.204 1.00 70.13 C
ATOM 12 O2' G B 109 42.117 38.460 122.105 1.00 70.49 O
ATOM 13 C1' G B 109 43.559 40.213 122.943 1.00 70.25 C
ATOM 14 N9 G B 109 44.750 40.967 122.553 1.00 70.25 N
ATOM 15 C8 G B 109 45.785 41.361 123.370 1.00 70.48 C
ATOM 16 N7 G B 109 46.738 41.983 122.729 1.00 70.60 N
ATOM 17 C5 G B 109 46.304 42.012 121.411 1.00 69.63 C
ATOM 18 C6 G B 109 46.925 42.544 120.254 1.00 68.90 C
ATOM 19 O6 G B 109 48.021 43.109 120.158 1.00 67.93 O
ATOM 20 N1 G B 109 46.138 42.358 119.124 1.00 68.89 N
ATOM 21 C2 G B 109 44.913 41.736 119.107 1.00 69.17 C
ATOM 22 N2 G B 109 44.305 41.655 117.913 1.00 69.02 N
ATOM 23 N3 G B 109 44.327 41.230 120.177 1.00 68.79 N
ATOM 24 C4 G B 109 45.072 41.401 121.286 1.00 69.56 C
ATOM 25 P U B 110 45.144 35.714 122.221 1.00 67.18 P
ATOM 26 OP1 U B 110 44.625 34.331 122.092 1.00 68.34 O
ATOM 27 OP2 U B 110 46.451 35.954 122.901 1.00 65.37 O
ATOM 28 O5' U B 110 45.198 36.340 120.760 1.00 66.29 O
TER
Atoms:
C2: (45.846,43.231,115.495)
OP1: (47.966,48.322,109.756)
OP2: (49.160,47.920,112.000)
C4: (47.633,44.274,116.563)
O5': (47.079,46.700,111.443)
C3': (44.344,46.075,112.536)
C1': (45.106,43.963,113.247)
O4': (45.780,44.311,112.048)
C5': (46.041,46.201,110.586)
P: (48.379,47.400,110.845)
O2: (44.934,42.375,115.463)
C4': (45.056,45.380,111.383)
C2': (43.899,44.893,113.381)
O2': (42.749,44.254,112.862)
N1: (46.032,44.082,114.387)
N3: (46.663,43.359,116.568)
N4: (48.402,44.368,117.648)
C6: (47.041,45.003,114.390)
C5: (47.855,45.133,115.446)
O3': (43.228,46.862,112.124)
OP1: (47.966,48.322,109.756)
OP2: (49.160,47.920,112.000)
C4: (47.633,44.274,116.563)
O5': (47.079,46.700,111.443)
C3': (44.344,46.075,112.536)
C1': (45.106,43.963,113.247)
O4': (45.780,44.311,112.048)
C5': (46.041,46.201,110.586)
P: (48.379,47.400,110.845)
O2: (44.934,42.375,115.463)
C4': (45.056,45.380,111.383)
C2': (43.899,44.893,113.381)
O2': (42.749,44.254,112.862)
N1: (46.032,44.082,114.387)
N3: (46.663,43.359,116.568)
N4: (48.402,44.368,117.648)
C6: (47.041,45.003,114.390)
C5: (47.855,45.133,115.446)
O3': (43.228,46.862,112.124)
OP1: (45.025,37.706,128.912)
OP2: (46.804,39.045,127.610)
C3': (44.280,37.988,123.127)
C1': (43.559,40.213,122.943)
C5': (44.857,38.206,125.583)
O6: (48.021,43.109,120.158)
O4': (43.677,39.903,124.326)
C8: (45.785,41.361,123.370)
C2: (44.913,41.736,119.107)
C6: (46.925,42.544,120.254)
C5: (46.304,42.012,121.411)
C4: (45.072,41.401,121.286)
P: (45.392,38.874,128.067)
C4': (43.853,38.470,124.495)
C2': (43.465,38.876,122.204)
O2': (42.117,38.460,122.105)
N1: (46.138,42.358,119.124)
N2: (44.305,41.655,117.913)
N3: (44.327,41.230,120.177)
N7: (46.738,41.983,122.729)
N9: (44.750,40.967,122.553)
O5': (44.450,38.859,126.786)
O3': (44.038,36.608,122.951)
OP2: (46.804,39.045,127.610)
C3': (44.280,37.988,123.127)
C1': (43.559,40.213,122.943)
C5': (44.857,38.206,125.583)
O6: (48.021,43.109,120.158)
O4': (43.677,39.903,124.326)
C8: (45.785,41.361,123.370)
C2: (44.913,41.736,119.107)
C6: (46.925,42.544,120.254)
C5: (46.304,42.012,121.411)
C4: (45.072,41.401,121.286)
P: (45.392,38.874,128.067)
C4': (43.853,38.470,124.495)
C2': (43.465,38.876,122.204)
O2': (42.117,38.460,122.105)
N1: (46.138,42.358,119.124)
N2: (44.305,41.655,117.913)
N3: (44.327,41.230,120.177)
N7: (46.738,41.983,122.729)
N9: (44.750,40.967,122.553)
O5': (44.450,38.859,126.786)
O3': (44.038,36.608,122.951)
Image (generated by PyMOL):