ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3F1E:A473:A474

Extra

PDB:
ATOM 1 O3' G A 472 -49.955 12.555 86.830 1.00100.08 O
ATOM 2 P U A 473 -50.687 13.537 85.806 1.00107.00 P
ATOM 3 OP1 U A 473 -51.914 12.888 85.301 1.00 96.74 O
ATOM 4 OP2 U A 473 -49.666 13.989 84.837 1.00 97.45 O
ATOM 5 O5' U A 473 -51.080 14.772 86.746 1.00 93.92 O
ATOM 6 C5' U A 473 -51.769 14.547 87.968 1.00 83.49 C
ATOM 7 C4' U A 473 -52.146 15.856 88.651 1.00 95.04 C
ATOM 8 O4' U A 473 -51.028 16.321 89.451 1.00 94.46 O
ATOM 9 C3' U A 473 -52.519 17.031 87.746 1.00 87.14 C
ATOM 10 O3' U A 473 -53.918 17.045 87.504 1.00 97.76 O
ATOM 11 C2' U A 473 -52.158 18.210 88.631 1.00 81.29 C
ATOM 12 O2' U A 473 -53.164 18.435 89.602 1.00 68.75 O
ATOM 13 C1' U A 473 -50.875 17.716 89.287 1.00 83.93 C
ATOM 14 N1 U A 473 -49.657 17.925 88.468 1.00 78.46 N
ATOM 15 C2 U A 473 -48.979 19.123 88.518 1.00 80.77 C
ATOM 16 O2 U A 473 -49.328 20.059 89.208 1.00 80.14 O
ATOM 17 N3 U A 473 -47.865 19.197 87.720 1.00 85.92 N
ATOM 18 C4 U A 473 -47.375 18.200 86.893 1.00 88.03 C
ATOM 19 O4 U A 473 -46.369 18.388 86.226 1.00 78.97 O
ATOM 20 C5 U A 473 -48.133 16.980 86.897 1.00 90.18 C
ATOM 21 C6 U A 473 -49.219 16.894 87.670 1.00 84.05 C
ATOM 22 P A A 474 -54.552 17.960 86.353 1.00 98.79 P
ATOM 23 OP1 A A 474 -56.021 17.882 86.507 1.00101.33 O
ATOM 24 OP2 A A 474 -53.922 17.589 85.061 1.00 84.16 O
ATOM 25 O5' A A 474 -54.104 19.448 86.751 1.00 87.14 O
TER

ATOM 1 O3' U B 473 -53.918 17.045 87.504 1.00 97.76 O
ATOM 2 P A B 474 -54.552 17.960 86.353 1.00 98.79 P
ATOM 3 OP1 A B 474 -56.021 17.882 86.507 1.00101.33 O
ATOM 4 OP2 A B 474 -53.922 17.589 85.061 1.00 84.16 O
ATOM 5 O5' A B 474 -54.104 19.448 86.751 1.00 87.14 O
ATOM 6 C5' A B 474 -54.868 20.554 86.283 1.00 80.98 C
ATOM 7 C4' A B 474 -54.092 21.857 86.316 1.00 86.25 C
ATOM 8 O4' A B 474 -52.843 21.764 85.574 1.00 91.56 O
ATOM 9 C3' A B 474 -54.848 23.032 85.701 1.00 86.46 C
ATOM 10 O3' A B 474 -54.674 24.198 86.509 1.00 87.86 O
ATOM 11 C2' A B 474 -54.158 23.166 84.345 1.00 75.09 C
ATOM 12 O2' A B 474 -54.370 24.426 83.737 1.00 62.29 O
ATOM 13 C1' A B 474 -52.726 22.959 84.835 1.00 79.65 C
ATOM 14 N9 A B 474 -51.687 22.842 83.815 1.00 70.86 N
ATOM 15 C8 A B 474 -51.618 21.959 82.780 1.00 74.56 C
ATOM 16 N7 A B 474 -50.555 22.113 82.025 1.00 75.31 N
ATOM 17 C5 A B 474 -49.875 23.168 82.604 1.00 80.92 C
ATOM 18 C6 A B 474 -48.668 23.823 82.279 1.00 85.33 C
ATOM 19 N6 A B 474 -47.898 23.488 81.241 1.00 78.93 N
ATOM 20 N1 A B 474 -48.279 24.846 83.066 1.00 79.97 N
ATOM 21 C2 A B 474 -49.052 25.186 84.103 1.00 79.66 C
ATOM 22 N3 A B 474 -50.199 24.645 84.510 1.00 82.47 N
ATOM 23 C4 A B 474 -50.561 23.629 83.710 1.00 78.26 C
ATOM 24 P A B 475 -55.200 24.268 88.021 1.00 98.63 P
ATOM 25 OP1 A B 475 -55.342 22.882 88.532 1.00 79.70 O
ATOM 26 OP2 A B 475 -56.348 25.207 88.033 1.00 86.89 O
ATOM 27 O5' A B 475 -53.990 24.963 88.810 1.00 96.91 O
TER

Atoms:
C4: (-47.375,18.200,86.893)
N3: (-47.865,19.197,87.720)
OP1: (-51.914,12.888,85.301)
OP2: (-49.666,13.989,84.837)
C2: (-48.979,19.123,88.518)
C1': (-50.875,17.716,89.287)
C3': (-52.519,17.031,87.746)
O5': (-51.080,14.772,86.746)
O4': (-51.028,16.321,89.451)
C5': (-51.769,14.547,87.968)
P: (-50.687,13.537,85.806)
C4': (-52.146,15.856,88.651)
C2': (-52.158,18.210,88.631)
O2': (-53.164,18.435,89.602)
N1: (-49.657,17.925,88.468)
O4: (-46.369,18.388,86.226)
O2: (-49.328,20.059,89.208)
C6: (-49.219,16.894,87.670)
C5: (-48.133,16.980,86.897)
O3': (-53.918,17.045,87.504)
OP1: (-56.021,17.882,86.507)
OP2: (-53.922,17.589,85.061)
C3': (-54.848,23.032,85.701)
C1': (-52.726,22.959,84.835)
C5': (-54.868,20.554,86.283)
O4': (-52.843,21.764,85.574)
C8: (-51.618,21.959,82.780)
O2': (-54.370,24.426,83.737)
C6: (-48.668,23.823,82.279)
C5: (-49.875,23.168,82.604)
C4: (-50.561,23.629,83.710)
P: (-54.552,17.960,86.353)
C4': (-54.092,21.857,86.316)
C2': (-54.158,23.166,84.345)
C2: (-49.052,25.186,84.103)
N1: (-48.279,24.846,83.066)
N3: (-50.199,24.645,84.510)
N6: (-47.898,23.488,81.241)
N7: (-50.555,22.113,82.025)
N9: (-51.687,22.842,83.815)
O5': (-54.104,19.448,86.751)
O3': (-54.674,24.198,86.509)
Image (generated by PyMOL):
PyMOL image
show in jmol