ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3G78:A219:A220

Extra

PDB:
ATOM 1 O3' G A 218 -13.414 83.345 155.270 1.00 61.13 O
ATOM 2 P U A 219 -12.665 82.944 156.631 1.00 60.17 P
ATOM 3 OP1 U A 219 -13.300 81.713 157.152 1.00 60.23 O
ATOM 4 OP2 U A 219 -12.596 84.157 157.477 1.00 60.10 O
ATOM 5 O5' U A 219 -11.186 82.562 156.157 1.00 59.23 O
ATOM 6 C5' U A 219 -10.194 83.574 156.056 1.00 57.93 C
ATOM 7 C4' U A 219 -9.643 83.659 154.642 1.00 56.92 C
ATOM 8 O4' U A 219 -10.214 84.801 153.945 1.00 56.63 O
ATOM 9 C3' U A 219 -8.131 83.824 154.585 1.00 56.16 C
ATOM 10 O3' U A 219 -7.550 82.539 154.372 1.00 55.07 O
ATOM 11 C2' U A 219 -7.935 84.764 153.398 1.00 56.18 C
ATOM 12 O2' U A 219 -7.907 84.062 152.171 1.00 56.21 O
ATOM 13 C1' U A 219 -9.185 85.639 153.459 1.00 56.27 C
ATOM 14 N1 U A 219 -9.088 86.852 154.343 1.00 56.23 N
ATOM 15 C2 U A 219 -8.381 87.958 153.918 1.00 56.33 C
ATOM 16 O2 U A 219 -7.810 88.010 152.844 1.00 56.49 O
ATOM 17 N3 U A 219 -8.361 89.013 154.800 1.00 56.35 N
ATOM 18 C4 U A 219 -8.964 89.078 156.044 1.00 56.18 C
ATOM 19 O4 U A 219 -8.859 90.093 156.729 1.00 55.92 O
ATOM 20 C5 U A 219 -9.684 87.889 156.418 1.00 56.17 C
ATOM 21 C6 U A 219 -9.718 86.853 155.571 1.00 56.25 C
ATOM 22 P A A 220 -6.153 82.099 155.027 1.00 54.20 P
ATOM 23 OP1 A A 220 -5.084 82.616 154.145 1.00 54.55 O
ATOM 24 OP2 A A 220 -6.232 80.646 155.285 1.00 54.29 O
ATOM 25 O5' A A 220 -6.086 82.855 156.440 1.00 53.34 O
TER

ATOM 1 O3' U B 219 -7.550 82.539 154.372 1.00 55.07 O
ATOM 2 P A B 220 -6.153 82.099 155.027 1.00 54.20 P
ATOM 3 OP1 A B 220 -5.084 82.616 154.145 1.00 54.55 O
ATOM 4 OP2 A B 220 -6.232 80.646 155.285 1.00 54.29 O
ATOM 5 O5' A B 220 -6.086 82.855 156.440 1.00 53.34 O
ATOM 6 C5' A B 220 -5.283 84.024 156.661 1.00 52.19 C
ATOM 7 C4' A B 220 -3.939 83.980 155.944 1.00 51.30 C
ATOM 8 O4' A B 220 -3.443 85.325 155.727 1.00 51.29 O
ATOM 9 C3' A B 220 -2.805 83.274 156.670 1.00 50.63 C
ATOM 10 O3' A B 220 -1.860 82.787 155.730 1.00 49.48 O
ATOM 11 C2' A B 220 -2.164 84.381 157.495 1.00 50.84 C
ATOM 12 O2' A B 220 -0.785 84.125 157.672 1.00 51.12 O
ATOM 13 C1' A B 220 -2.366 85.608 156.605 1.00 51.05 C
ATOM 14 N9 A B 220 -2.711 86.839 157.315 1.00 51.01 N
ATOM 15 C8 A B 220 -3.717 87.009 158.224 1.00 51.00 C
ATOM 16 N7 A B 220 -3.802 88.229 158.697 1.00 50.97 N
ATOM 17 C5 A B 220 -2.786 88.910 158.049 1.00 50.91 C
ATOM 18 C6 A B 220 -2.350 90.248 158.119 1.00 50.96 C
ATOM 19 N6 A B 220 -2.923 91.164 158.909 1.00 51.04 N
ATOM 20 N1 A B 220 -1.304 90.605 157.344 1.00 50.90 N
ATOM 21 C2 A B 220 -0.740 89.679 156.561 1.00 50.91 C
ATOM 22 N3 A B 220 -1.060 88.394 156.413 1.00 50.99 N
ATOM 23 C4 A B 220 -2.101 88.069 157.194 1.00 50.93 C
ATOM 24 P A B 221 -0.787 81.721 156.239 1.00 48.80 P
ATOM 25 OP1 A B 221 -0.725 80.631 155.240 1.00 48.87 O
ATOM 26 OP2 A B 221 -1.112 81.434 157.656 1.00 48.85 O
ATOM 27 O5' A B 221 0.619 82.468 156.193 1.00 47.34 O
TER

Atoms:
C4: (-8.964,89.078,156.044)
N3: (-8.361,89.013,154.800)
OP1: (-13.300,81.713,157.152)
OP2: (-12.596,84.157,157.477)
C2: (-8.381,87.958,153.918)
C1': (-9.185,85.639,153.459)
C3': (-8.131,83.824,154.585)
O5': (-11.186,82.562,156.157)
O4': (-10.214,84.801,153.945)
C5': (-10.194,83.574,156.056)
P: (-12.665,82.944,156.631)
C4': (-9.643,83.659,154.642)
C2': (-7.935,84.764,153.398)
O2': (-7.907,84.062,152.171)
N1: (-9.088,86.852,154.343)
O4: (-8.859,90.093,156.729)
O2: (-7.810,88.010,152.844)
C6: (-9.718,86.853,155.571)
C5: (-9.684,87.889,156.418)
O3': (-7.550,82.539,154.372)
OP1: (-5.084,82.616,154.145)
OP2: (-6.232,80.646,155.285)
C3': (-2.805,83.274,156.670)
C1': (-2.366,85.608,156.605)
C5': (-5.283,84.024,156.661)
O4': (-3.443,85.325,155.727)
C8: (-3.717,87.009,158.224)
O2': (-0.785,84.125,157.672)
C6: (-2.350,90.248,158.119)
C5: (-2.786,88.910,158.049)
C4: (-2.101,88.069,157.194)
P: (-6.153,82.099,155.027)
C4': (-3.939,83.980,155.944)
C2': (-2.164,84.381,157.495)
C2: (-0.740,89.679,156.561)
N1: (-1.304,90.605,157.344)
N3: (-1.060,88.394,156.413)
N6: (-2.923,91.164,158.909)
N7: (-3.802,88.229,158.697)
N9: (-2.711,86.839,157.315)
O5': (-6.086,82.855,156.440)
O3': (-1.860,82.787,155.730)
Image (generated by PyMOL):
PyMOL image
show in jmol