Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1NYI:B23:A0
Extra
PDB:
ATOM 1 O3' A A 22 21.205 18.606 44.622 1.00 39.59 O
ATOM 2 P C A 23 21.648 18.457 46.148 1.00 41.14 P
ATOM 3 OP1 C A 23 21.024 19.623 46.833 1.00 40.59 O
ATOM 4 OP2 C A 23 23.110 18.207 46.231 1.00 39.24 O
ATOM 5 O5' C A 23 20.851 17.130 46.547 1.00 42.01 O
ATOM 6 C5' C A 23 19.417 17.150 46.473 1.00 44.10 C
ATOM 7 C4' C A 23 18.833 15.768 46.677 1.00 45.94 C
ATOM 8 O4' C A 23 19.274 14.862 45.628 1.00 46.25 O
ATOM 9 C3' C A 23 19.287 15.089 47.963 1.00 47.13 C
ATOM 10 O3' C A 23 18.530 15.584 49.069 1.00 46.80 O
ATOM 11 C2' C A 23 19.044 13.613 47.630 1.00 47.28 C
ATOM 12 O2' C A 23 17.701 13.212 47.821 1.00 50.30 O
ATOM 13 C1' C A 23 19.368 13.547 46.140 1.00 45.34 C
ATOM 14 N1 C A 23 20.723 13.037 45.889 1.00 43.92 N
ATOM 15 C2 C A 23 20.876 11.670 45.648 1.00 43.57 C
ATOM 16 O2 C A 23 19.854 10.970 45.657 1.00 43.45 O
ATOM 17 N3 C A 23 22.130 11.178 45.412 1.00 42.61 N
ATOM 18 C4 C A 23 23.183 12.011 45.417 1.00 42.57 C
ATOM 19 N4 C A 23 24.400 11.521 45.185 1.00 41.40 N
ATOM 20 C5 C A 23 23.039 13.409 45.663 1.00 43.43 C
ATOM 21 C6 C A 23 21.805 13.875 45.893 1.00 43.65 C
TER
ATOM 1 P G B 0 24.560 0.593 42.074 1.00 52.76 P
ATOM 2 OP1 G B 0 25.414 1.644 42.689 1.00 53.85 O
ATOM 3 OP2 G B 0 24.619 0.333 40.612 1.00 52.01 O
ATOM 4 O5' G B 0 23.055 0.936 42.459 1.00 50.80 O
ATOM 5 C5' G B 0 22.455 0.202 43.462 1.00 48.85 C
ATOM 6 C4' G B 0 21.709 1.143 44.364 1.00 48.15 C
ATOM 7 O4' G B 0 22.641 1.952 45.103 1.00 48.27 O
ATOM 8 C3' G B 0 20.867 2.184 43.668 1.00 48.17 C
ATOM 9 O3' G B 0 19.711 1.588 43.164 1.00 48.33 O
ATOM 10 C2' G B 0 20.584 3.117 44.832 1.00 48.61 C
ATOM 11 O2' G B 0 19.536 2.684 45.672 1.00 49.20 O
ATOM 12 C1' G B 0 21.925 3.085 45.573 1.00 48.27 C
ATOM 13 N9 G B 0 22.745 4.270 45.309 1.00 47.83 N
ATOM 14 C8 G B 0 24.065 4.283 44.902 1.00 47.41 C
ATOM 15 N7 G B 0 24.547 5.486 44.745 1.00 46.82 N
ATOM 16 C5 G B 0 23.478 6.320 45.049 1.00 46.26 C
ATOM 17 C6 G B 0 23.402 7.728 45.042 1.00 46.34 C
ATOM 18 O6 G B 0 24.305 8.524 44.753 1.00 47.69 O
ATOM 19 N1 G B 0 22.138 8.192 45.401 1.00 45.34 N
ATOM 20 C2 G B 0 21.080 7.381 45.727 1.00 45.25 C
ATOM 21 N2 G B 0 19.933 7.989 46.056 1.00 44.98 N
ATOM 22 N3 G B 0 21.139 6.059 45.740 1.00 45.57 N
ATOM 23 C4 G B 0 22.362 5.594 45.392 1.00 46.34 C
ATOM 24 P U B 1 19.380 1.787 41.612 1.00 49.77 P
ATOM 25 OP1 U B 1 18.416 0.758 41.173 1.00 50.64 O
ATOM 26 OP2 U B 1 20.649 1.902 40.836 1.00 47.82 O
ATOM 27 O5' U B 1 18.553 3.154 41.750 1.00 48.19 O
TER
ATOM 2 P C A 23 21.648 18.457 46.148 1.00 41.14 P
ATOM 3 OP1 C A 23 21.024 19.623 46.833 1.00 40.59 O
ATOM 4 OP2 C A 23 23.110 18.207 46.231 1.00 39.24 O
ATOM 5 O5' C A 23 20.851 17.130 46.547 1.00 42.01 O
ATOM 6 C5' C A 23 19.417 17.150 46.473 1.00 44.10 C
ATOM 7 C4' C A 23 18.833 15.768 46.677 1.00 45.94 C
ATOM 8 O4' C A 23 19.274 14.862 45.628 1.00 46.25 O
ATOM 9 C3' C A 23 19.287 15.089 47.963 1.00 47.13 C
ATOM 10 O3' C A 23 18.530 15.584 49.069 1.00 46.80 O
ATOM 11 C2' C A 23 19.044 13.613 47.630 1.00 47.28 C
ATOM 12 O2' C A 23 17.701 13.212 47.821 1.00 50.30 O
ATOM 13 C1' C A 23 19.368 13.547 46.140 1.00 45.34 C
ATOM 14 N1 C A 23 20.723 13.037 45.889 1.00 43.92 N
ATOM 15 C2 C A 23 20.876 11.670 45.648 1.00 43.57 C
ATOM 16 O2 C A 23 19.854 10.970 45.657 1.00 43.45 O
ATOM 17 N3 C A 23 22.130 11.178 45.412 1.00 42.61 N
ATOM 18 C4 C A 23 23.183 12.011 45.417 1.00 42.57 C
ATOM 19 N4 C A 23 24.400 11.521 45.185 1.00 41.40 N
ATOM 20 C5 C A 23 23.039 13.409 45.663 1.00 43.43 C
ATOM 21 C6 C A 23 21.805 13.875 45.893 1.00 43.65 C
TER
ATOM 1 P G B 0 24.560 0.593 42.074 1.00 52.76 P
ATOM 2 OP1 G B 0 25.414 1.644 42.689 1.00 53.85 O
ATOM 3 OP2 G B 0 24.619 0.333 40.612 1.00 52.01 O
ATOM 4 O5' G B 0 23.055 0.936 42.459 1.00 50.80 O
ATOM 5 C5' G B 0 22.455 0.202 43.462 1.00 48.85 C
ATOM 6 C4' G B 0 21.709 1.143 44.364 1.00 48.15 C
ATOM 7 O4' G B 0 22.641 1.952 45.103 1.00 48.27 O
ATOM 8 C3' G B 0 20.867 2.184 43.668 1.00 48.17 C
ATOM 9 O3' G B 0 19.711 1.588 43.164 1.00 48.33 O
ATOM 10 C2' G B 0 20.584 3.117 44.832 1.00 48.61 C
ATOM 11 O2' G B 0 19.536 2.684 45.672 1.00 49.20 O
ATOM 12 C1' G B 0 21.925 3.085 45.573 1.00 48.27 C
ATOM 13 N9 G B 0 22.745 4.270 45.309 1.00 47.83 N
ATOM 14 C8 G B 0 24.065 4.283 44.902 1.00 47.41 C
ATOM 15 N7 G B 0 24.547 5.486 44.745 1.00 46.82 N
ATOM 16 C5 G B 0 23.478 6.320 45.049 1.00 46.26 C
ATOM 17 C6 G B 0 23.402 7.728 45.042 1.00 46.34 C
ATOM 18 O6 G B 0 24.305 8.524 44.753 1.00 47.69 O
ATOM 19 N1 G B 0 22.138 8.192 45.401 1.00 45.34 N
ATOM 20 C2 G B 0 21.080 7.381 45.727 1.00 45.25 C
ATOM 21 N2 G B 0 19.933 7.989 46.056 1.00 44.98 N
ATOM 22 N3 G B 0 21.139 6.059 45.740 1.00 45.57 N
ATOM 23 C4 G B 0 22.362 5.594 45.392 1.00 46.34 C
ATOM 24 P U B 1 19.380 1.787 41.612 1.00 49.77 P
ATOM 25 OP1 U B 1 18.416 0.758 41.173 1.00 50.64 O
ATOM 26 OP2 U B 1 20.649 1.902 40.836 1.00 47.82 O
ATOM 27 O5' U B 1 18.553 3.154 41.750 1.00 48.19 O
TER
Atoms:
C2: (20.876,11.670,45.648)
OP1: (21.024,19.623,46.833)
OP2: (23.110,18.207,46.231)
C4: (23.183,12.011,45.417)
O5': (20.851,17.130,46.547)
C3': (19.287,15.089,47.963)
C1': (19.368,13.547,46.140)
O4': (19.274,14.862,45.628)
C5': (19.417,17.150,46.473)
P: (21.648,18.457,46.148)
O2: (19.854,10.970,45.657)
C4': (18.833,15.768,46.677)
C2': (19.044,13.613,47.630)
O2': (17.701,13.212,47.821)
N1: (20.723,13.037,45.889)
N3: (22.130,11.178,45.412)
N4: (24.400,11.521,45.185)
C6: (21.805,13.875,45.893)
C5: (23.039,13.409,45.663)
O3': (18.530,15.584,49.069)
OP1: (21.024,19.623,46.833)
OP2: (23.110,18.207,46.231)
C4: (23.183,12.011,45.417)
O5': (20.851,17.130,46.547)
C3': (19.287,15.089,47.963)
C1': (19.368,13.547,46.140)
O4': (19.274,14.862,45.628)
C5': (19.417,17.150,46.473)
P: (21.648,18.457,46.148)
O2: (19.854,10.970,45.657)
C4': (18.833,15.768,46.677)
C2': (19.044,13.613,47.630)
O2': (17.701,13.212,47.821)
N1: (20.723,13.037,45.889)
N3: (22.130,11.178,45.412)
N4: (24.400,11.521,45.185)
C6: (21.805,13.875,45.893)
C5: (23.039,13.409,45.663)
O3': (18.530,15.584,49.069)
OP1: (25.414,1.644,42.689)
OP2: (24.619,0.333,40.612)
C3': (20.867,2.184,43.668)
C1': (21.925,3.085,45.573)
C5': (22.455,0.202,43.462)
O6: (24.305,8.524,44.753)
O4': (22.641,1.952,45.103)
C8: (24.065,4.283,44.902)
C2: (21.080,7.381,45.727)
C6: (23.402,7.728,45.042)
C5: (23.478,6.320,45.049)
C4: (22.362,5.594,45.392)
P: (24.560,0.593,42.074)
C4': (21.709,1.143,44.364)
C2': (20.584,3.117,44.832)
O2': (19.536,2.684,45.672)
N1: (22.138,8.192,45.401)
N2: (19.933,7.989,46.056)
N3: (21.139,6.059,45.740)
N7: (24.547,5.486,44.745)
N9: (22.745,4.270,45.309)
O5': (23.055,0.936,42.459)
O3': (19.711,1.588,43.164)
OP2: (24.619,0.333,40.612)
C3': (20.867,2.184,43.668)
C1': (21.925,3.085,45.573)
C5': (22.455,0.202,43.462)
O6: (24.305,8.524,44.753)
O4': (22.641,1.952,45.103)
C8: (24.065,4.283,44.902)
C2: (21.080,7.381,45.727)
C6: (23.402,7.728,45.042)
C5: (23.478,6.320,45.049)
C4: (22.362,5.594,45.392)
P: (24.560,0.593,42.074)
C4': (21.709,1.143,44.364)
C2': (20.584,3.117,44.832)
O2': (19.536,2.684,45.672)
N1: (22.138,8.192,45.401)
N2: (19.933,7.989,46.056)
N3: (21.139,6.059,45.740)
N7: (24.547,5.486,44.745)
N9: (22.745,4.270,45.309)
O5': (23.055,0.936,42.459)
O3': (19.711,1.588,43.164)
Image (generated by PyMOL):