ClaRNA

Doublet info:

Details

Nucleotide types: CA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3MUR:R38:R39

Extra

PDB:
ATOM 1 O3' G A 37 -5.730 8.146 8.088 1.00 37.10 O
ATOM 2 P C A 38 -6.786 7.742 9.222 1.00 38.46 P
ATOM 3 OP1 C A 38 -7.997 8.574 9.071 1.00 39.95 O
ATOM 4 OP2 C A 38 -6.106 7.699 10.533 1.00 41.03 O
ATOM 5 O5' C A 38 -7.115 6.240 8.830 1.00 36.22 O
ATOM 6 C5' C A 38 -7.655 5.903 7.566 1.00 36.83 C
ATOM 7 C4' C A 38 -7.834 4.401 7.511 1.00 36.50 C
ATOM 8 O4' C A 38 -6.531 3.772 7.465 1.00 35.25 O
ATOM 9 C3' C A 38 -8.485 3.808 8.747 1.00 38.36 C
ATOM 10 O3' C A 38 -9.890 3.912 8.627 1.00 37.49 O
ATOM 11 C2' C A 38 -7.952 2.376 8.736 1.00 38.37 C
ATOM 12 O2' C A 38 -8.611 1.513 7.827 1.00 39.28 O
ATOM 13 C1' C A 38 -6.524 2.586 8.245 1.00 35.05 C
ATOM 14 N1 C A 38 -5.474 2.653 9.327 1.00 31.66 N
ATOM 15 C2 C A 38 -4.886 1.471 9.802 1.00 31.71 C
ATOM 16 O2 C A 38 -5.224 0.367 9.356 1.00 29.56 O
ATOM 17 N3 C A 38 -3.937 1.558 10.769 1.00 34.58 N
ATOM 18 C4 C A 38 -3.566 2.739 11.263 1.00 33.68 C
ATOM 19 N4 C A 38 -2.632 2.742 12.221 1.00 31.98 N
ATOM 20 C5 C A 38 -4.145 3.953 10.786 1.00 34.48 C
ATOM 21 C6 C A 38 -5.081 3.859 9.834 1.00 32.56 C
ATOM 22 P A A 39 -10.794 4.029 9.934 1.00 39.61 P
ATOM 23 OP1 A A 39 -12.083 4.649 9.540 1.00 39.99 O
ATOM 24 OP2 A A 39 -9.990 4.611 11.029 1.00 41.32 O
ATOM 25 O5' A A 39 -11.078 2.492 10.254 1.00 42.11 O
TER

ATOM 1 O3' C B 38 -9.890 3.912 8.627 1.00 37.49 O
ATOM 2 P A B 39 -10.794 4.029 9.934 1.00 39.61 P
ATOM 3 OP1 A B 39 -12.083 4.649 9.540 1.00 39.99 O
ATOM 4 OP2 A B 39 -9.990 4.611 11.029 1.00 41.32 O
ATOM 5 O5' A B 39 -11.078 2.492 10.254 1.00 42.11 O
ATOM 6 C5' A B 39 -10.655 1.896 11.463 1.00 44.47 C
ATOM 7 C4' A B 39 -11.360 0.563 11.650 1.00 44.96 C
ATOM 8 O4' A B 39 -10.548 -0.320 12.465 1.00 45.34 O
ATOM 9 C3' A B 39 -12.711 0.596 12.345 1.00 46.81 C
ATOM 10 O3' A B 39 -13.434 -0.508 11.841 1.00 47.78 O
ATOM 11 C2' A B 39 -12.336 0.409 13.817 1.00 46.74 C
ATOM 12 O2' A B 39 -13.374 -0.148 14.596 1.00 47.25 O
ATOM 13 C1' A B 39 -11.183 -0.584 13.702 1.00 45.79 C
ATOM 14 N9 A B 39 -10.152 -0.484 14.729 1.00 45.74 N
ATOM 15 C8 A B 39 -9.732 0.643 15.375 1.00 46.86 C
ATOM 16 N7 A B 39 -8.776 0.429 16.244 1.00 48.31 N
ATOM 17 C5 A B 39 -8.546 -0.932 16.154 1.00 47.93 C
ATOM 18 C6 A B 39 -7.647 -1.794 16.820 1.00 49.45 C
ATOM 19 N6 A B 39 -6.788 -1.366 17.745 1.00 51.95 N
ATOM 20 N1 A B 39 -7.666 -3.111 16.508 1.00 48.61 N
ATOM 21 C2 A B 39 -8.535 -3.530 15.577 1.00 47.41 C
ATOM 22 N3 A B 39 -9.427 -2.814 14.885 1.00 46.15 N
ATOM 23 C4 A B 39 -9.381 -1.511 15.219 1.00 46.22 C
ATOM 24 P A B 40 -14.926 -0.404 11.286 1.00 49.38 P
ATOM 25 OP1 A B 40 -15.195 0.999 10.914 1.00 51.31 O
ATOM 26 OP2 A B 40 -15.794 -1.126 12.248 1.00 51.69 O
ATOM 27 O5' A B 40 -14.868 -1.247 9.930 1.00 49.30 O
TER

Atoms:
C2: (-4.886,1.471,9.802)
OP1: (-7.997,8.574,9.071)
OP2: (-6.106,7.699,10.533)
C4: (-3.566,2.739,11.263)
O5': (-7.115,6.240,8.830)
C3': (-8.485,3.808,8.747)
C1': (-6.524,2.586,8.245)
O4': (-6.531,3.772,7.465)
C5': (-7.655,5.903,7.566)
P: (-6.786,7.742,9.222)
O2: (-5.224,0.367,9.356)
C4': (-7.834,4.401,7.511)
C2': (-7.952,2.376,8.736)
O2': (-8.611,1.513,7.827)
N1: (-5.474,2.653,9.327)
N3: (-3.937,1.558,10.769)
N4: (-2.632,2.742,12.221)
C6: (-5.081,3.859,9.834)
C5: (-4.145,3.953,10.786)
O3': (-9.890,3.912,8.627)
OP1: (-12.083,4.649,9.540)
OP2: (-9.990,4.611,11.029)
C3': (-12.711,0.596,12.345)
C1': (-11.183,-0.584,13.702)
C5': (-10.655,1.896,11.463)
O4': (-10.548,-0.320,12.465)
C8: (-9.732,0.643,15.375)
O2': (-13.374,-0.148,14.596)
C6: (-7.647,-1.794,16.820)
C5: (-8.546,-0.932,16.154)
C4: (-9.381,-1.511,15.219)
P: (-10.794,4.029,9.934)
C4': (-11.360,0.563,11.650)
C2': (-12.336,0.409,13.817)
C2: (-8.535,-3.530,15.577)
N1: (-7.666,-3.111,16.508)
N3: (-9.427,-2.814,14.885)
N6: (-6.788,-1.366,17.745)
N7: (-8.776,0.429,16.244)
N9: (-10.152,-0.484,14.729)
O5': (-11.078,2.492,10.254)
O3': (-13.434,-0.508,11.841)
Image (generated by PyMOL):
PyMOL image
show in jmol