ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3Q0N:D2:D3

Extra

PDB:
ATOM 1 O3' G A 1 11.526 -36.000 -80.676 1.00 55.44 O
ATOM 2 P U A 2 12.866 -35.618 -79.886 1.00 61.32 P
ATOM 3 OP1 U A 2 13.584 -34.586 -80.668 1.00 62.16 O
ATOM 4 OP2 U A 2 13.532 -36.855 -79.415 1.00 61.37 O
ATOM 5 O5' U A 2 12.343 -34.946 -78.536 1.00 50.57 O
ATOM 6 C5' U A 2 13.264 -34.449 -77.589 1.00 41.19 C
ATOM 7 C4' U A 2 12.930 -33.023 -77.242 1.00 46.77 C
ATOM 8 O4' U A 2 11.538 -32.929 -76.847 1.00 55.39 O
ATOM 9 C3' U A 2 13.696 -32.457 -76.063 1.00 46.31 C
ATOM 10 O3' U A 2 14.967 -31.978 -76.451 1.00 46.80 O
ATOM 11 C2' U A 2 12.765 -31.370 -75.547 1.00 43.64 C
ATOM 12 O2' U A 2 12.885 -30.199 -76.338 1.00 51.80 O
ATOM 13 C1' U A 2 11.394 -32.006 -75.791 1.00 48.95 C
ATOM 14 N1 U A 2 10.927 -32.766 -74.600 1.00 45.81 N
ATOM 15 C2 U A 2 10.431 -32.069 -73.524 1.00 42.65 C
ATOM 16 O2 U A 2 10.344 -30.857 -73.517 1.00 44.33 O
ATOM 17 N3 U A 2 10.034 -32.840 -72.458 1.00 43.36 N
ATOM 18 C4 U A 2 10.088 -34.221 -72.368 1.00 44.38 C
ATOM 19 O4 U A 2 9.702 -34.784 -71.345 1.00 39.22 O
ATOM 20 C5 U A 2 10.622 -34.876 -73.537 1.00 43.92 C
ATOM 21 C6 U A 2 11.015 -34.141 -74.586 1.00 41.43 C
ATOM 22 P A A 3 16.292 -32.493 -75.737 1.00 45.69 P
ATOM 23 OP1 A A 3 17.395 -32.398 -76.720 1.00 56.84 O
ATOM 24 OP2 A A 3 16.063 -33.750 -74.984 1.00 38.87 O
ATOM 25 O5' A A 3 16.470 -31.363 -74.622 1.00 43.22 O
TER

ATOM 1 O3' U B 2 14.967 -31.978 -76.451 1.00 46.80 O
ATOM 2 P A B 3 16.292 -32.493 -75.737 1.00 45.69 P
ATOM 3 OP1 A B 3 17.395 -32.398 -76.720 1.00 56.84 O
ATOM 4 OP2 A B 3 16.063 -33.750 -74.984 1.00 38.87 O
ATOM 5 O5' A B 3 16.470 -31.363 -74.622 1.00 43.22 O
ATOM 6 C5' A B 3 16.313 -30.010 -75.021 1.00 43.85 C
ATOM 7 C4' A B 3 16.647 -29.060 -73.900 1.00 45.54 C
ATOM 8 O4' A B 3 15.644 -29.136 -72.855 1.00 47.47 O
ATOM 9 C3' A B 3 17.959 -29.332 -73.183 1.00 50.95 C
ATOM 10 O3' A B 3 19.066 -28.816 -73.906 1.00 56.66 O
ATOM 11 C2' A B 3 17.734 -28.667 -71.830 1.00 47.98 C
ATOM 12 O2' A B 3 17.885 -27.259 -71.942 1.00 47.35 O
ATOM 13 C1' A B 3 16.248 -28.949 -71.594 1.00 48.02 C
ATOM 14 N9 A B 3 15.997 -30.149 -70.768 1.00 42.85 N
ATOM 15 C8 A B 3 15.980 -31.457 -71.170 1.00 42.48 C
ATOM 16 N7 A B 3 15.718 -32.308 -70.207 1.00 41.22 N
ATOM 17 C5 A B 3 15.542 -31.502 -69.097 1.00 42.42 C
ATOM 18 C6 A B 3 15.232 -31.788 -67.748 1.00 41.34 C
ATOM 19 N6 A B 3 15.034 -33.023 -67.283 1.00 36.18 N
ATOM 20 N1 A B 3 15.126 -30.747 -66.892 1.00 38.02 N
ATOM 21 C2 A B 3 15.310 -29.506 -67.363 1.00 40.70 C
ATOM 22 N3 A B 3 15.606 -29.114 -68.607 1.00 46.85 N
ATOM 23 C4 A B 3 15.706 -30.170 -69.430 1.00 40.34 C
ATOM 24 P C B 4 20.504 -29.514 -73.868 1.00 53.91 P
ATOM 25 OP1 C B 4 21.395 -28.808 -74.820 1.00 52.81 O
ATOM 26 OP2 C B 4 20.384 -30.991 -73.870 1.00 42.45 O
ATOM 27 O5' C B 4 20.992 -29.009 -72.434 1.00 55.91 O
TER

Atoms:
C4: (10.088,-34.221,-72.368)
N3: (10.034,-32.840,-72.458)
OP1: (13.584,-34.586,-80.668)
OP2: (13.532,-36.855,-79.415)
C2: (10.431,-32.069,-73.524)
C1': (11.394,-32.006,-75.791)
C3': (13.696,-32.457,-76.063)
O5': (12.343,-34.946,-78.536)
O4': (11.538,-32.929,-76.847)
C5': (13.264,-34.449,-77.589)
P: (12.866,-35.618,-79.886)
C4': (12.930,-33.023,-77.242)
C2': (12.765,-31.370,-75.547)
O2': (12.885,-30.199,-76.338)
N1: (10.927,-32.766,-74.600)
O4: (9.702,-34.784,-71.345)
O2: (10.344,-30.857,-73.517)
C6: (11.015,-34.141,-74.586)
C5: (10.622,-34.876,-73.537)
O3': (14.967,-31.978,-76.451)
OP1: (17.395,-32.398,-76.720)
OP2: (16.063,-33.750,-74.984)
C3': (17.959,-29.332,-73.183)
C1': (16.248,-28.949,-71.594)
C5': (16.313,-30.010,-75.021)
O4': (15.644,-29.136,-72.855)
C8: (15.980,-31.457,-71.170)
O2': (17.885,-27.259,-71.942)
C6: (15.232,-31.788,-67.748)
C5: (15.542,-31.502,-69.097)
C4: (15.706,-30.170,-69.430)
P: (16.292,-32.493,-75.737)
C4': (16.647,-29.060,-73.900)
C2': (17.734,-28.667,-71.830)
C2: (15.310,-29.506,-67.363)
N1: (15.126,-30.747,-66.892)
N3: (15.606,-29.114,-68.607)
N6: (15.034,-33.023,-67.283)
N7: (15.718,-32.308,-70.207)
N9: (15.997,-30.149,-70.768)
O5': (16.470,-31.363,-74.622)
O3': (19.066,-28.816,-73.906)
Image (generated by PyMOL):
PyMOL image
show in jmol