ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3Q0P:C2:C3

Extra

PDB:
ATOM 1 O3' G A 1 60.717 0.059 -29.170 1.00 37.86 O
ATOM 2 P U A 2 61.645 -1.234 -29.012 1.00 35.35 P
ATOM 3 OP1 U A 2 62.974 -0.786 -28.539 1.00 36.24 O
ATOM 4 OP2 U A 2 61.534 -2.029 -30.256 1.00 32.32 O
ATOM 5 O5' U A 2 60.942 -2.036 -27.820 1.00 39.53 O
ATOM 6 C5' U A 2 61.427 -3.320 -27.443 1.00 32.15 C
ATOM 7 C4' U A 2 62.090 -3.267 -26.078 1.00 32.26 C
ATOM 8 O4' U A 2 61.142 -2.763 -25.102 1.00 28.03 O
ATOM 9 C3' U A 2 62.556 -4.613 -25.539 1.00 35.55 C
ATOM 10 O3' U A 2 63.903 -4.852 -25.927 1.00 39.01 O
ATOM 11 C2' U A 2 62.434 -4.418 -24.032 1.00 37.88 C
ATOM 12 O2' U A 2 63.537 -3.721 -23.488 1.00 32.34 O
ATOM 13 C1' U A 2 61.173 -3.566 -23.938 1.00 35.26 C
ATOM 14 N1 U A 2 59.917 -4.367 -23.886 1.00 28.38 N
ATOM 15 C2 U A 2 59.398 -4.731 -22.662 1.00 27.79 C
ATOM 16 O2 U A 2 59.917 -4.430 -21.602 1.00 31.09 O
ATOM 17 N3 U A 2 58.240 -5.466 -22.722 1.00 28.41 N
ATOM 18 C4 U A 2 57.565 -5.865 -23.861 1.00 26.47 C
ATOM 19 O4 U A 2 56.534 -6.524 -23.759 1.00 29.52 O
ATOM 20 C5 U A 2 58.169 -5.447 -25.099 1.00 21.88 C
ATOM 21 C6 U A 2 59.297 -4.729 -25.065 1.00 24.98 C
ATOM 22 P A A 3 64.328 -6.284 -26.500 1.00 32.42 P
ATOM 23 OP1 A A 3 65.648 -6.139 -27.154 1.00 45.91 O
ATOM 24 OP2 A A 3 63.182 -6.829 -27.262 1.00 28.44 O
ATOM 25 O5' A A 3 64.500 -7.163 -25.174 1.00 30.48 O
TER

ATOM 1 O3' U B 2 63.903 -4.852 -25.927 1.00 39.01 O
ATOM 2 P A B 3 64.328 -6.284 -26.500 1.00 32.42 P
ATOM 3 OP1 A B 3 65.648 -6.139 -27.154 1.00 45.91 O
ATOM 4 OP2 A B 3 63.182 -6.829 -27.262 1.00 28.44 O
ATOM 5 O5' A B 3 64.500 -7.163 -25.174 1.00 30.48 O
ATOM 6 C5' A B 3 64.911 -6.546 -23.959 1.00 31.14 C
ATOM 7 C4' A B 3 65.708 -7.516 -23.105 1.00 34.96 C
ATOM 8 O4' A B 3 64.891 -7.960 -21.991 1.00 30.58 O
ATOM 9 C3' A B 3 66.150 -8.786 -23.820 1.00 31.91 C
ATOM 10 O3' A B 3 67.436 -8.598 -24.396 1.00 32.84 O
ATOM 11 C2' A B 3 66.190 -9.800 -22.683 1.00 33.09 C
ATOM 12 O2' A B 3 67.377 -9.710 -21.921 1.00 33.84 O
ATOM 13 C1' A B 3 64.992 -9.363 -21.846 1.00 30.03 C
ATOM 14 N9 A B 3 63.732 -9.962 -22.276 1.00 30.17 N
ATOM 15 C8 A B 3 63.056 -9.714 -23.437 1.00 32.56 C
ATOM 16 N7 A B 3 61.944 -10.400 -23.560 1.00 25.93 N
ATOM 17 C5 A B 3 61.888 -11.151 -22.398 1.00 26.30 C
ATOM 18 C6 A B 3 60.951 -12.087 -21.917 1.00 30.41 C
ATOM 19 N6 A B 3 59.846 -12.433 -22.587 1.00 24.16 N
ATOM 20 N1 A B 3 61.194 -12.655 -20.718 1.00 29.63 N
ATOM 21 C2 A B 3 62.300 -12.306 -20.051 1.00 29.67 C
ATOM 22 N3 A B 3 63.251 -11.441 -20.400 1.00 29.48 N
ATOM 23 C4 A B 3 62.982 -10.893 -21.595 1.00 26.56 C
ATOM 24 P U B 4 68.108 -9.772 -25.250 1.00 45.52 P
ATOM 25 OP1 U B 4 69.277 -9.206 -25.960 1.00 39.59 O
ATOM 26 OP2 U B 4 67.038 -10.450 -26.015 1.00 31.00 O
ATOM 27 O5' U B 4 68.625 -10.783 -24.124 1.00 35.15 O
TER

Atoms:
C4: (57.565,-5.865,-23.861)
N3: (58.240,-5.466,-22.722)
OP1: (62.974,-0.786,-28.539)
OP2: (61.534,-2.029,-30.256)
C2: (59.398,-4.731,-22.662)
C1': (61.173,-3.566,-23.938)
C3': (62.556,-4.613,-25.539)
O5': (60.942,-2.036,-27.820)
O4': (61.142,-2.763,-25.102)
C5': (61.427,-3.320,-27.443)
P: (61.645,-1.234,-29.012)
C4': (62.090,-3.267,-26.078)
C2': (62.434,-4.418,-24.032)
O2': (63.537,-3.721,-23.488)
N1: (59.917,-4.367,-23.886)
O4: (56.534,-6.524,-23.759)
O2: (59.917,-4.430,-21.602)
C6: (59.297,-4.729,-25.065)
C5: (58.169,-5.447,-25.099)
O3': (63.903,-4.852,-25.927)
OP1: (65.648,-6.139,-27.154)
OP2: (63.182,-6.829,-27.262)
C3': (66.150,-8.786,-23.820)
C1': (64.992,-9.363,-21.846)
C5': (64.911,-6.546,-23.959)
O4': (64.891,-7.960,-21.991)
C8: (63.056,-9.714,-23.437)
O2': (67.377,-9.710,-21.921)
C6: (60.951,-12.087,-21.917)
C5: (61.888,-11.151,-22.398)
C4: (62.982,-10.893,-21.595)
P: (64.328,-6.284,-26.500)
C4': (65.708,-7.516,-23.105)
C2': (66.190,-9.800,-22.683)
C2: (62.300,-12.306,-20.051)
N1: (61.194,-12.655,-20.718)
N3: (63.251,-11.441,-20.400)
N6: (59.846,-12.433,-22.587)
N7: (61.944,-10.400,-23.560)
N9: (63.732,-9.962,-22.276)
O5': (64.500,-7.163,-25.174)
O3': (67.436,-8.598,-24.396)
Image (generated by PyMOL):
PyMOL image
show in jmol