Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2PN4:B16:A2
Extra
PDB:
ATOM 1 P C A 16 -21.455 -23.209 -2.126 1.00 45.67 P
ATOM 2 OP1 C A 16 -22.218 -24.333 -2.736 1.00 46.29 O
ATOM 3 OP2 C A 16 -20.316 -23.458 -1.217 1.00 44.63 O
ATOM 4 O5' C A 16 -20.897 -22.293 -3.314 1.00 45.57 O
ATOM 5 C5' C A 16 -21.611 -22.210 -4.546 1.00 45.31 C
ATOM 6 C4' C A 16 -21.026 -21.076 -5.352 1.00 43.59 C
ATOM 7 O4' C A 16 -20.814 -19.938 -4.474 1.00 42.83 O
ATOM 8 C3' C A 16 -19.626 -21.361 -5.848 1.00 41.58 C
ATOM 9 O3' C A 16 -19.661 -22.120 -7.000 1.00 40.81 O
ATOM 10 C2' C A 16 -19.142 -19.953 -6.134 1.00 42.01 C
ATOM 11 O2' C A 16 -19.646 -19.429 -7.352 1.00 44.17 O
ATOM 12 C1' C A 16 -19.683 -19.198 -4.927 1.00 40.80 C
ATOM 13 N1 C A 16 -18.641 -19.043 -3.825 1.00 41.35 N
ATOM 14 C2 C A 16 -17.607 -18.094 -3.949 1.00 39.66 C
ATOM 15 O2 C A 16 -17.542 -17.385 -4.966 1.00 38.61 O
ATOM 16 N3 C A 16 -16.696 -17.971 -2.951 1.00 37.38 N
ATOM 17 C4 C A 16 -16.770 -18.720 -1.856 1.00 37.96 C
ATOM 18 N4 C A 16 -15.835 -18.546 -0.901 1.00 37.06 N
ATOM 19 C5 C A 16 -17.814 -19.680 -1.694 1.00 39.26 C
ATOM 20 C6 C A 16 -18.705 -19.807 -2.685 1.00 41.47 C
ATOM 21 P C A 17 -18.424 -23.026 -7.413 1.00 40.29 P
ATOM 22 OP1 C A 17 -18.907 -23.994 -8.418 1.00 45.44 O
ATOM 23 OP2 C A 17 -17.817 -23.533 -6.173 1.00 44.18 O
ATOM 24 O5' C A 17 -17.389 -22.021 -8.096 1.00 41.55 O
TER
ATOM 1 O3' G B 1 -6.462 -11.852 -1.961 1.00 40.14 O
ATOM 2 P G B 2 -7.730 -10.932 -1.633 1.00 41.17 P
ATOM 3 OP1 G B 2 -7.236 -9.549 -1.732 1.00 41.21 O
ATOM 4 OP2 G B 2 -8.331 -11.402 -0.355 1.00 39.79 O
ATOM 5 O5' G B 2 -8.780 -11.244 -2.842 1.00 41.03 O
ATOM 6 C5' G B 2 -8.466 -10.964 -4.206 1.00 39.81 C
ATOM 7 C4' G B 2 -9.533 -11.456 -5.164 1.00 38.02 C
ATOM 8 O4' G B 2 -9.616 -12.889 -5.087 1.00 37.30 O
ATOM 9 C3' G B 2 -10.966 -11.057 -4.862 1.00 37.90 C
ATOM 10 O3' G B 2 -11.195 -9.706 -5.218 1.00 38.25 O
ATOM 11 C2' G B 2 -11.710 -12.054 -5.747 1.00 36.36 C
ATOM 12 O2' G B 2 -11.524 -11.822 -7.134 1.00 39.52 O
ATOM 13 C1' G B 2 -10.938 -13.305 -5.372 1.00 37.42 C
ATOM 14 N9 G B 2 -11.453 -14.006 -4.194 1.00 38.36 N
ATOM 15 C8 G B 2 -10.937 -14.007 -2.914 1.00 37.15 C
ATOM 16 N7 G B 2 -11.626 -14.756 -2.097 1.00 37.81 N
ATOM 17 C5 G B 2 -12.670 -15.261 -2.870 1.00 38.15 C
ATOM 18 C6 G B 2 -13.758 -16.111 -2.540 1.00 38.63 C
ATOM 19 O6 G B 2 -14.006 -16.625 -1.453 1.00 38.29 O
ATOM 20 N1 G B 2 -14.611 -16.371 -3.626 1.00 38.76 N
ATOM 21 C2 G B 2 -14.405 -15.857 -4.892 1.00 38.78 C
ATOM 22 N2 G B 2 -15.281 -16.177 -5.842 1.00 36.84 N
ATOM 23 N3 G B 2 -13.391 -15.055 -5.204 1.00 39.13 N
ATOM 24 C4 G B 2 -12.572 -14.806 -4.158 1.00 37.47 C
ATOM 25 P A B 3 -12.239 -8.782 -4.419 1.00 35.93 P
ATOM 26 OP1 A B 3 -12.013 -7.394 -4.882 1.00 36.68 O
ATOM 27 OP2 A B 3 -12.182 -9.112 -2.982 1.00 35.97 O
ATOM 28 O5' A B 3 -13.643 -9.304 -5.005 1.00 38.43 O
TER
ATOM 2 OP1 C A 16 -22.218 -24.333 -2.736 1.00 46.29 O
ATOM 3 OP2 C A 16 -20.316 -23.458 -1.217 1.00 44.63 O
ATOM 4 O5' C A 16 -20.897 -22.293 -3.314 1.00 45.57 O
ATOM 5 C5' C A 16 -21.611 -22.210 -4.546 1.00 45.31 C
ATOM 6 C4' C A 16 -21.026 -21.076 -5.352 1.00 43.59 C
ATOM 7 O4' C A 16 -20.814 -19.938 -4.474 1.00 42.83 O
ATOM 8 C3' C A 16 -19.626 -21.361 -5.848 1.00 41.58 C
ATOM 9 O3' C A 16 -19.661 -22.120 -7.000 1.00 40.81 O
ATOM 10 C2' C A 16 -19.142 -19.953 -6.134 1.00 42.01 C
ATOM 11 O2' C A 16 -19.646 -19.429 -7.352 1.00 44.17 O
ATOM 12 C1' C A 16 -19.683 -19.198 -4.927 1.00 40.80 C
ATOM 13 N1 C A 16 -18.641 -19.043 -3.825 1.00 41.35 N
ATOM 14 C2 C A 16 -17.607 -18.094 -3.949 1.00 39.66 C
ATOM 15 O2 C A 16 -17.542 -17.385 -4.966 1.00 38.61 O
ATOM 16 N3 C A 16 -16.696 -17.971 -2.951 1.00 37.38 N
ATOM 17 C4 C A 16 -16.770 -18.720 -1.856 1.00 37.96 C
ATOM 18 N4 C A 16 -15.835 -18.546 -0.901 1.00 37.06 N
ATOM 19 C5 C A 16 -17.814 -19.680 -1.694 1.00 39.26 C
ATOM 20 C6 C A 16 -18.705 -19.807 -2.685 1.00 41.47 C
ATOM 21 P C A 17 -18.424 -23.026 -7.413 1.00 40.29 P
ATOM 22 OP1 C A 17 -18.907 -23.994 -8.418 1.00 45.44 O
ATOM 23 OP2 C A 17 -17.817 -23.533 -6.173 1.00 44.18 O
ATOM 24 O5' C A 17 -17.389 -22.021 -8.096 1.00 41.55 O
TER
ATOM 1 O3' G B 1 -6.462 -11.852 -1.961 1.00 40.14 O
ATOM 2 P G B 2 -7.730 -10.932 -1.633 1.00 41.17 P
ATOM 3 OP1 G B 2 -7.236 -9.549 -1.732 1.00 41.21 O
ATOM 4 OP2 G B 2 -8.331 -11.402 -0.355 1.00 39.79 O
ATOM 5 O5' G B 2 -8.780 -11.244 -2.842 1.00 41.03 O
ATOM 6 C5' G B 2 -8.466 -10.964 -4.206 1.00 39.81 C
ATOM 7 C4' G B 2 -9.533 -11.456 -5.164 1.00 38.02 C
ATOM 8 O4' G B 2 -9.616 -12.889 -5.087 1.00 37.30 O
ATOM 9 C3' G B 2 -10.966 -11.057 -4.862 1.00 37.90 C
ATOM 10 O3' G B 2 -11.195 -9.706 -5.218 1.00 38.25 O
ATOM 11 C2' G B 2 -11.710 -12.054 -5.747 1.00 36.36 C
ATOM 12 O2' G B 2 -11.524 -11.822 -7.134 1.00 39.52 O
ATOM 13 C1' G B 2 -10.938 -13.305 -5.372 1.00 37.42 C
ATOM 14 N9 G B 2 -11.453 -14.006 -4.194 1.00 38.36 N
ATOM 15 C8 G B 2 -10.937 -14.007 -2.914 1.00 37.15 C
ATOM 16 N7 G B 2 -11.626 -14.756 -2.097 1.00 37.81 N
ATOM 17 C5 G B 2 -12.670 -15.261 -2.870 1.00 38.15 C
ATOM 18 C6 G B 2 -13.758 -16.111 -2.540 1.00 38.63 C
ATOM 19 O6 G B 2 -14.006 -16.625 -1.453 1.00 38.29 O
ATOM 20 N1 G B 2 -14.611 -16.371 -3.626 1.00 38.76 N
ATOM 21 C2 G B 2 -14.405 -15.857 -4.892 1.00 38.78 C
ATOM 22 N2 G B 2 -15.281 -16.177 -5.842 1.00 36.84 N
ATOM 23 N3 G B 2 -13.391 -15.055 -5.204 1.00 39.13 N
ATOM 24 C4 G B 2 -12.572 -14.806 -4.158 1.00 37.47 C
ATOM 25 P A B 3 -12.239 -8.782 -4.419 1.00 35.93 P
ATOM 26 OP1 A B 3 -12.013 -7.394 -4.882 1.00 36.68 O
ATOM 27 OP2 A B 3 -12.182 -9.112 -2.982 1.00 35.97 O
ATOM 28 O5' A B 3 -13.643 -9.304 -5.005 1.00 38.43 O
TER
Atoms:
C2: (-17.607,-18.094,-3.949)
OP1: (-22.218,-24.333,-2.736)
OP2: (-20.316,-23.458,-1.217)
C4: (-16.770,-18.720,-1.856)
O5': (-20.897,-22.293,-3.314)
C3': (-19.626,-21.361,-5.848)
C1': (-19.683,-19.198,-4.927)
O4': (-20.814,-19.938,-4.474)
C5': (-21.611,-22.210,-4.546)
P: (-21.455,-23.209,-2.126)
O2: (-17.542,-17.385,-4.966)
C4': (-21.026,-21.076,-5.352)
C2': (-19.142,-19.953,-6.134)
O2': (-19.646,-19.429,-7.352)
N1: (-18.641,-19.043,-3.825)
N3: (-16.696,-17.971,-2.951)
N4: (-15.835,-18.546,-0.901)
C6: (-18.705,-19.807,-2.685)
C5: (-17.814,-19.680,-1.694)
O3': (-19.661,-22.120,-7.000)
OP1: (-22.218,-24.333,-2.736)
OP2: (-20.316,-23.458,-1.217)
C4: (-16.770,-18.720,-1.856)
O5': (-20.897,-22.293,-3.314)
C3': (-19.626,-21.361,-5.848)
C1': (-19.683,-19.198,-4.927)
O4': (-20.814,-19.938,-4.474)
C5': (-21.611,-22.210,-4.546)
P: (-21.455,-23.209,-2.126)
O2: (-17.542,-17.385,-4.966)
C4': (-21.026,-21.076,-5.352)
C2': (-19.142,-19.953,-6.134)
O2': (-19.646,-19.429,-7.352)
N1: (-18.641,-19.043,-3.825)
N3: (-16.696,-17.971,-2.951)
N4: (-15.835,-18.546,-0.901)
C6: (-18.705,-19.807,-2.685)
C5: (-17.814,-19.680,-1.694)
O3': (-19.661,-22.120,-7.000)
OP1: (-7.236,-9.549,-1.732)
OP2: (-8.331,-11.402,-0.355)
C3': (-10.966,-11.057,-4.862)
C1': (-10.938,-13.305,-5.372)
C5': (-8.466,-10.964,-4.206)
O6: (-14.006,-16.625,-1.453)
O4': (-9.616,-12.889,-5.087)
C8: (-10.937,-14.007,-2.914)
C2: (-14.405,-15.857,-4.892)
C6: (-13.758,-16.111,-2.540)
C5: (-12.670,-15.261,-2.870)
C4: (-12.572,-14.806,-4.158)
P: (-7.730,-10.932,-1.633)
C4': (-9.533,-11.456,-5.164)
C2': (-11.710,-12.054,-5.747)
O2': (-11.524,-11.822,-7.134)
N1: (-14.611,-16.371,-3.626)
N2: (-15.281,-16.177,-5.842)
N3: (-13.391,-15.055,-5.204)
N7: (-11.626,-14.756,-2.097)
N9: (-11.453,-14.006,-4.194)
O5': (-8.780,-11.244,-2.842)
O3': (-11.195,-9.706,-5.218)
OP2: (-8.331,-11.402,-0.355)
C3': (-10.966,-11.057,-4.862)
C1': (-10.938,-13.305,-5.372)
C5': (-8.466,-10.964,-4.206)
O6: (-14.006,-16.625,-1.453)
O4': (-9.616,-12.889,-5.087)
C8: (-10.937,-14.007,-2.914)
C2: (-14.405,-15.857,-4.892)
C6: (-13.758,-16.111,-2.540)
C5: (-12.670,-15.261,-2.870)
C4: (-12.572,-14.806,-4.158)
P: (-7.730,-10.932,-1.633)
C4': (-9.533,-11.456,-5.164)
C2': (-11.710,-12.054,-5.747)
O2': (-11.524,-11.822,-7.134)
N1: (-14.611,-16.371,-3.626)
N2: (-15.281,-16.177,-5.842)
N3: (-13.391,-15.055,-5.204)
N7: (-11.626,-14.756,-2.097)
N9: (-11.453,-14.006,-4.194)
O5': (-8.780,-11.244,-2.842)
O3': (-11.195,-9.706,-5.218)
Image (generated by PyMOL):