Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8N:V42:V43
Extra
PDB:
ATOM 1 O3' C A 41 -124.567 11.567 18.756 1.00 33.17 O
ATOM 2 P C A 42 -124.460 10.157 19.514 1.00 51.49 P
ATOM 3 OP1 C A 42 -125.545 10.110 20.530 1.00 51.49 O
ATOM 4 OP2 C A 42 -123.055 10.012 19.965 1.00 51.49 O
ATOM 5 O5' C A 42 -124.763 9.129 18.345 1.00 51.49 O
ATOM 6 C5' C A 42 -126.041 9.090 17.744 1.00 51.49 C
ATOM 7 C4' C A 42 -126.188 7.876 16.888 1.00 51.49 C
ATOM 8 O4' C A 42 -125.451 8.059 15.653 1.00 51.49 O
ATOM 9 C3' C A 42 -125.616 6.606 17.477 1.00 51.49 C
ATOM 10 O3' C A 42 -126.493 5.990 18.393 1.00 51.49 O
ATOM 11 C2' C A 42 -125.319 5.775 16.243 1.00 51.49 C
ATOM 12 O2' C A 42 -126.510 5.209 15.713 1.00 51.49 O
ATOM 13 C1' C A 42 -124.820 6.855 15.288 1.00 51.49 C
ATOM 14 N1 C A 42 -123.366 7.060 15.399 1.00 50.71 N
ATOM 15 C2 C A 42 -122.506 6.329 14.568 1.00 50.71 C
ATOM 16 O2 C A 42 -122.968 5.504 13.768 1.00 50.71 O
ATOM 17 N3 C A 42 -121.177 6.538 14.668 1.00 50.71 N
ATOM 18 C4 C A 42 -120.705 7.431 15.541 1.00 50.71 C
ATOM 19 N4 C A 42 -119.376 7.575 15.587 1.00 50.71 N
ATOM 20 C5 C A 42 -121.566 8.197 16.398 1.00 50.71 C
ATOM 21 C6 C A 42 -122.884 7.984 16.293 1.00 50.71 C
ATOM 22 P G A 43 -126.011 5.691 19.891 1.00 91.14 P
ATOM 23 OP1 G A 43 -126.766 6.599 20.789 1.00 91.14 O
ATOM 24 OP2 G A 43 -124.529 5.749 19.904 1.00 91.14 O
ATOM 25 O5' G A 43 -126.494 4.195 20.091 1.00 91.14 O
TER
ATOM 1 O3' C B 42 -126.493 5.990 18.393 1.00 51.49 O
ATOM 2 P G B 43 -126.011 5.691 19.891 1.00 91.14 P
ATOM 3 OP1 G B 43 -126.766 6.599 20.789 1.00 91.14 O
ATOM 4 OP2 G B 43 -124.529 5.749 19.904 1.00 91.14 O
ATOM 5 O5' G B 43 -126.494 4.195 20.091 1.00 91.14 O
ATOM 6 C5' G B 43 -126.240 3.208 19.096 1.00 91.14 C
ATOM 7 C4' G B 43 -125.803 1.909 19.717 1.00 91.14 C
ATOM 8 O4' G B 43 -124.372 1.742 19.527 1.00 91.14 O
ATOM 9 C3' G B 43 -126.052 1.796 21.229 1.00 91.14 C
ATOM 10 O3' G B 43 -126.531 0.499 21.537 1.00 91.14 O
ATOM 11 C2' G B 43 -124.667 1.995 21.846 1.00 91.14 C
ATOM 12 O2' G B 43 -124.479 1.355 23.094 1.00 91.14 O
ATOM 13 C1' G B 43 -123.763 1.410 20.768 1.00 91.14 C
ATOM 14 N9 G B 43 -122.395 1.938 20.774 1.00 91.58 N
ATOM 15 C8 G B 43 -121.981 3.250 20.823 1.00 91.58 C
ATOM 16 N7 G B 43 -120.683 3.382 20.809 1.00 91.58 N
ATOM 17 C5 G B 43 -120.213 2.078 20.746 1.00 91.58 C
ATOM 18 C6 G B 43 -118.887 1.579 20.705 1.00 91.58 C
ATOM 19 O6 G B 43 -117.824 2.211 20.714 1.00 91.58 O
ATOM 20 N1 G B 43 -118.873 0.187 20.648 1.00 91.58 N
ATOM 21 C2 G B 43 -119.985 -0.618 20.634 1.00 91.58 C
ATOM 22 N2 G B 43 -119.754 -1.935 20.578 1.00 91.58 N
ATOM 23 N3 G B 43 -121.222 -0.164 20.675 1.00 91.58 N
ATOM 24 C4 G B 43 -121.258 1.180 20.726 1.00 91.58 C
ATOM 25 P U B 44 -128.103 0.232 21.578 1.00 84.59 P
ATOM 26 OP1 U B 44 -128.539 0.019 20.175 1.00 84.59 O
ATOM 27 OP2 U B 44 -128.709 1.344 22.360 1.00 84.59 O
ATOM 28 O5' U B 44 -128.206 -1.130 22.402 1.00 84.59 O
TER
ATOM 2 P C A 42 -124.460 10.157 19.514 1.00 51.49 P
ATOM 3 OP1 C A 42 -125.545 10.110 20.530 1.00 51.49 O
ATOM 4 OP2 C A 42 -123.055 10.012 19.965 1.00 51.49 O
ATOM 5 O5' C A 42 -124.763 9.129 18.345 1.00 51.49 O
ATOM 6 C5' C A 42 -126.041 9.090 17.744 1.00 51.49 C
ATOM 7 C4' C A 42 -126.188 7.876 16.888 1.00 51.49 C
ATOM 8 O4' C A 42 -125.451 8.059 15.653 1.00 51.49 O
ATOM 9 C3' C A 42 -125.616 6.606 17.477 1.00 51.49 C
ATOM 10 O3' C A 42 -126.493 5.990 18.393 1.00 51.49 O
ATOM 11 C2' C A 42 -125.319 5.775 16.243 1.00 51.49 C
ATOM 12 O2' C A 42 -126.510 5.209 15.713 1.00 51.49 O
ATOM 13 C1' C A 42 -124.820 6.855 15.288 1.00 51.49 C
ATOM 14 N1 C A 42 -123.366 7.060 15.399 1.00 50.71 N
ATOM 15 C2 C A 42 -122.506 6.329 14.568 1.00 50.71 C
ATOM 16 O2 C A 42 -122.968 5.504 13.768 1.00 50.71 O
ATOM 17 N3 C A 42 -121.177 6.538 14.668 1.00 50.71 N
ATOM 18 C4 C A 42 -120.705 7.431 15.541 1.00 50.71 C
ATOM 19 N4 C A 42 -119.376 7.575 15.587 1.00 50.71 N
ATOM 20 C5 C A 42 -121.566 8.197 16.398 1.00 50.71 C
ATOM 21 C6 C A 42 -122.884 7.984 16.293 1.00 50.71 C
ATOM 22 P G A 43 -126.011 5.691 19.891 1.00 91.14 P
ATOM 23 OP1 G A 43 -126.766 6.599 20.789 1.00 91.14 O
ATOM 24 OP2 G A 43 -124.529 5.749 19.904 1.00 91.14 O
ATOM 25 O5' G A 43 -126.494 4.195 20.091 1.00 91.14 O
TER
ATOM 1 O3' C B 42 -126.493 5.990 18.393 1.00 51.49 O
ATOM 2 P G B 43 -126.011 5.691 19.891 1.00 91.14 P
ATOM 3 OP1 G B 43 -126.766 6.599 20.789 1.00 91.14 O
ATOM 4 OP2 G B 43 -124.529 5.749 19.904 1.00 91.14 O
ATOM 5 O5' G B 43 -126.494 4.195 20.091 1.00 91.14 O
ATOM 6 C5' G B 43 -126.240 3.208 19.096 1.00 91.14 C
ATOM 7 C4' G B 43 -125.803 1.909 19.717 1.00 91.14 C
ATOM 8 O4' G B 43 -124.372 1.742 19.527 1.00 91.14 O
ATOM 9 C3' G B 43 -126.052 1.796 21.229 1.00 91.14 C
ATOM 10 O3' G B 43 -126.531 0.499 21.537 1.00 91.14 O
ATOM 11 C2' G B 43 -124.667 1.995 21.846 1.00 91.14 C
ATOM 12 O2' G B 43 -124.479 1.355 23.094 1.00 91.14 O
ATOM 13 C1' G B 43 -123.763 1.410 20.768 1.00 91.14 C
ATOM 14 N9 G B 43 -122.395 1.938 20.774 1.00 91.58 N
ATOM 15 C8 G B 43 -121.981 3.250 20.823 1.00 91.58 C
ATOM 16 N7 G B 43 -120.683 3.382 20.809 1.00 91.58 N
ATOM 17 C5 G B 43 -120.213 2.078 20.746 1.00 91.58 C
ATOM 18 C6 G B 43 -118.887 1.579 20.705 1.00 91.58 C
ATOM 19 O6 G B 43 -117.824 2.211 20.714 1.00 91.58 O
ATOM 20 N1 G B 43 -118.873 0.187 20.648 1.00 91.58 N
ATOM 21 C2 G B 43 -119.985 -0.618 20.634 1.00 91.58 C
ATOM 22 N2 G B 43 -119.754 -1.935 20.578 1.00 91.58 N
ATOM 23 N3 G B 43 -121.222 -0.164 20.675 1.00 91.58 N
ATOM 24 C4 G B 43 -121.258 1.180 20.726 1.00 91.58 C
ATOM 25 P U B 44 -128.103 0.232 21.578 1.00 84.59 P
ATOM 26 OP1 U B 44 -128.539 0.019 20.175 1.00 84.59 O
ATOM 27 OP2 U B 44 -128.709 1.344 22.360 1.00 84.59 O
ATOM 28 O5' U B 44 -128.206 -1.130 22.402 1.00 84.59 O
TER
Atoms:
C2: (-122.506,6.329,14.568)
OP1: (-125.545,10.110,20.530)
OP2: (-123.055,10.012,19.965)
C4: (-120.705,7.431,15.541)
O5': (-124.763,9.129,18.345)
C3': (-125.616,6.606,17.477)
C1': (-124.820,6.855,15.288)
O4': (-125.451,8.059,15.653)
C5': (-126.041,9.090,17.744)
P: (-124.460,10.157,19.514)
O2: (-122.968,5.504,13.768)
C4': (-126.188,7.876,16.888)
C2': (-125.319,5.775,16.243)
O2': (-126.510,5.209,15.713)
N1: (-123.366,7.060,15.399)
N3: (-121.177,6.538,14.668)
N4: (-119.376,7.575,15.587)
C6: (-122.884,7.984,16.293)
C5: (-121.566,8.197,16.398)
O3': (-126.493,5.990,18.393)
OP1: (-125.545,10.110,20.530)
OP2: (-123.055,10.012,19.965)
C4: (-120.705,7.431,15.541)
O5': (-124.763,9.129,18.345)
C3': (-125.616,6.606,17.477)
C1': (-124.820,6.855,15.288)
O4': (-125.451,8.059,15.653)
C5': (-126.041,9.090,17.744)
P: (-124.460,10.157,19.514)
O2: (-122.968,5.504,13.768)
C4': (-126.188,7.876,16.888)
C2': (-125.319,5.775,16.243)
O2': (-126.510,5.209,15.713)
N1: (-123.366,7.060,15.399)
N3: (-121.177,6.538,14.668)
N4: (-119.376,7.575,15.587)
C6: (-122.884,7.984,16.293)
C5: (-121.566,8.197,16.398)
O3': (-126.493,5.990,18.393)
OP1: (-126.766,6.599,20.789)
OP2: (-124.529,5.749,19.904)
C3': (-126.052,1.796,21.229)
C1': (-123.763,1.410,20.768)
C5': (-126.240,3.208,19.096)
O6: (-117.824,2.211,20.714)
O4': (-124.372,1.742,19.527)
C8: (-121.981,3.250,20.823)
C2: (-119.985,-0.618,20.634)
C6: (-118.887,1.579,20.705)
C5: (-120.213,2.078,20.746)
C4: (-121.258,1.180,20.726)
P: (-126.011,5.691,19.891)
C4': (-125.803,1.909,19.717)
C2': (-124.667,1.995,21.846)
O2': (-124.479,1.355,23.094)
N1: (-118.873,0.187,20.648)
N2: (-119.754,-1.935,20.578)
N3: (-121.222,-0.164,20.675)
N7: (-120.683,3.382,20.809)
N9: (-122.395,1.938,20.774)
O5': (-126.494,4.195,20.091)
O3': (-126.531,0.499,21.537)
OP2: (-124.529,5.749,19.904)
C3': (-126.052,1.796,21.229)
C1': (-123.763,1.410,20.768)
C5': (-126.240,3.208,19.096)
O6: (-117.824,2.211,20.714)
O4': (-124.372,1.742,19.527)
C8: (-121.981,3.250,20.823)
C2: (-119.985,-0.618,20.634)
C6: (-118.887,1.579,20.705)
C5: (-120.213,2.078,20.746)
C4: (-121.258,1.180,20.726)
P: (-126.011,5.691,19.891)
C4': (-125.803,1.909,19.717)
C2': (-124.667,1.995,21.846)
O2': (-124.479,1.355,23.094)
N1: (-118.873,0.187,20.648)
N2: (-119.754,-1.935,20.578)
N3: (-121.222,-0.164,20.675)
N7: (-120.683,3.382,20.809)
N9: (-122.395,1.938,20.774)
O5': (-126.494,4.195,20.091)
O3': (-126.531,0.499,21.537)
Image (generated by PyMOL):