Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YLS:B34:B10
Extra
PDB:
ATOM 1 O3' U A 33 41.355 29.764 32.958 1.00 15.55 O
ATOM 2 P C A 34 42.759 30.395 33.300 1.00 21.52 P
ATOM 3 OP1 C A 34 43.491 29.514 34.243 1.00 21.10 O
ATOM 4 OP2 C A 34 42.575 31.823 33.573 1.00 21.16 O
ATOM 5 O5' C A 34 43.520 30.365 31.928 1.00 23.06 O
ATOM 6 C5' C A 34 44.846 29.827 31.893 1.00 21.77 C
ATOM 7 C4' C A 34 45.445 30.192 30.558 1.00 21.91 C
ATOM 8 O4' C A 34 44.446 30.055 29.478 1.00 19.34 O
ATOM 9 C3' C A 34 45.831 31.637 30.447 1.00 20.70 C
ATOM 10 O3' C A 34 46.985 31.923 31.212 1.00 19.58 O
ATOM 11 C2' C A 34 45.984 31.791 28.951 1.00 18.67 C
ATOM 12 O2' C A 34 47.223 31.305 28.500 1.00 19.73 O
ATOM 13 C1' C A 34 44.791 30.951 28.456 1.00 17.51 C
ATOM 14 N1 C A 34 43.623 31.739 28.186 1.00 17.86 N
ATOM 15 C2 C A 34 43.680 32.636 27.136 1.00 16.93 C
ATOM 16 O2 C A 34 44.710 32.708 26.506 1.00 18.58 O
ATOM 17 N3 C A 34 42.621 33.392 26.840 1.00 16.18 N
ATOM 18 C4 C A 34 41.516 33.283 27.565 1.00 16.92 C
ATOM 19 N4 C A 34 40.511 34.066 27.236 1.00 17.18 N
ATOM 20 C5 C A 34 41.399 32.376 28.657 1.00 17.34 C
ATOM 21 C6 C A 34 42.480 31.624 28.946 1.00 18.71 C
ATOM 22 P G A 35 46.909 33.253 32.089 1.00 21.35 P
ATOM 23 OP1 G A 35 47.949 33.213 33.135 1.00 20.31 O
ATOM 24 OP2 G A 35 45.472 33.479 32.408 1.00 20.93 O
ATOM 25 O5' G A 35 47.312 34.389 31.066 1.00 22.61 O
TER
ATOM 1 O3' C B 9 39.646 42.000 18.896 1.00 20.73 O
ATOM 2 P G B 10 39.693 40.547 18.209 1.00 22.77 P
ATOM 3 OP1 G B 10 39.740 40.724 16.721 1.00 22.20 O
ATOM 4 OP2 G B 10 38.622 39.715 18.782 1.00 22.61 O
ATOM 5 O5' G B 10 41.047 39.902 18.765 1.00 20.06 O
ATOM 6 C5' G B 10 42.297 40.385 18.398 1.00 18.49 C
ATOM 7 C4' G B 10 43.365 39.556 19.065 1.00 18.28 C
ATOM 8 O4' G B 10 43.222 39.704 20.481 1.00 19.46 O
ATOM 9 C3' G B 10 43.299 38.053 18.862 1.00 18.72 C
ATOM 10 O3' G B 10 43.873 37.651 17.642 1.00 19.82 O
ATOM 11 C2' G B 10 44.117 37.589 20.054 1.00 19.58 C
ATOM 12 O2' G B 10 45.519 37.757 19.918 1.00 20.69 O
ATOM 13 C1' G B 10 43.585 38.504 21.129 1.00 19.24 C
ATOM 14 N9 G B 10 42.451 37.949 21.879 1.00 19.17 N
ATOM 15 C8 G B 10 41.115 38.285 21.845 1.00 17.47 C
ATOM 16 N7 G B 10 40.381 37.581 22.677 1.00 16.53 N
ATOM 17 C5 G B 10 41.291 36.746 23.296 1.00 17.27 C
ATOM 18 C6 G B 10 41.116 35.776 24.300 1.00 16.90 C
ATOM 19 O6 G B 10 40.087 35.421 24.876 1.00 14.34 O
ATOM 20 N1 G B 10 42.305 35.158 24.614 1.00 18.67 N
ATOM 21 C2 G B 10 43.515 35.478 24.052 1.00 19.59 C
ATOM 22 N2 G B 10 44.567 34.799 24.490 1.00 22.05 N
ATOM 23 N3 G B 10 43.702 36.380 23.130 1.00 17.36 N
ATOM 24 C4 G B 10 42.558 36.967 22.806 1.00 18.34 C
ATOM 25 P U B 11 43.338 36.411 16.778 1.00 22.39 P
ATOM 26 OP1 U B 11 43.697 36.681 15.365 1.00 24.90 O
ATOM 27 OP2 U B 11 41.911 36.092 17.087 1.00 21.69 O
ATOM 28 O5' U B 11 44.216 35.210 17.328 1.00 22.18 O
TER
ATOM 2 P C A 34 42.759 30.395 33.300 1.00 21.52 P
ATOM 3 OP1 C A 34 43.491 29.514 34.243 1.00 21.10 O
ATOM 4 OP2 C A 34 42.575 31.823 33.573 1.00 21.16 O
ATOM 5 O5' C A 34 43.520 30.365 31.928 1.00 23.06 O
ATOM 6 C5' C A 34 44.846 29.827 31.893 1.00 21.77 C
ATOM 7 C4' C A 34 45.445 30.192 30.558 1.00 21.91 C
ATOM 8 O4' C A 34 44.446 30.055 29.478 1.00 19.34 O
ATOM 9 C3' C A 34 45.831 31.637 30.447 1.00 20.70 C
ATOM 10 O3' C A 34 46.985 31.923 31.212 1.00 19.58 O
ATOM 11 C2' C A 34 45.984 31.791 28.951 1.00 18.67 C
ATOM 12 O2' C A 34 47.223 31.305 28.500 1.00 19.73 O
ATOM 13 C1' C A 34 44.791 30.951 28.456 1.00 17.51 C
ATOM 14 N1 C A 34 43.623 31.739 28.186 1.00 17.86 N
ATOM 15 C2 C A 34 43.680 32.636 27.136 1.00 16.93 C
ATOM 16 O2 C A 34 44.710 32.708 26.506 1.00 18.58 O
ATOM 17 N3 C A 34 42.621 33.392 26.840 1.00 16.18 N
ATOM 18 C4 C A 34 41.516 33.283 27.565 1.00 16.92 C
ATOM 19 N4 C A 34 40.511 34.066 27.236 1.00 17.18 N
ATOM 20 C5 C A 34 41.399 32.376 28.657 1.00 17.34 C
ATOM 21 C6 C A 34 42.480 31.624 28.946 1.00 18.71 C
ATOM 22 P G A 35 46.909 33.253 32.089 1.00 21.35 P
ATOM 23 OP1 G A 35 47.949 33.213 33.135 1.00 20.31 O
ATOM 24 OP2 G A 35 45.472 33.479 32.408 1.00 20.93 O
ATOM 25 O5' G A 35 47.312 34.389 31.066 1.00 22.61 O
TER
ATOM 1 O3' C B 9 39.646 42.000 18.896 1.00 20.73 O
ATOM 2 P G B 10 39.693 40.547 18.209 1.00 22.77 P
ATOM 3 OP1 G B 10 39.740 40.724 16.721 1.00 22.20 O
ATOM 4 OP2 G B 10 38.622 39.715 18.782 1.00 22.61 O
ATOM 5 O5' G B 10 41.047 39.902 18.765 1.00 20.06 O
ATOM 6 C5' G B 10 42.297 40.385 18.398 1.00 18.49 C
ATOM 7 C4' G B 10 43.365 39.556 19.065 1.00 18.28 C
ATOM 8 O4' G B 10 43.222 39.704 20.481 1.00 19.46 O
ATOM 9 C3' G B 10 43.299 38.053 18.862 1.00 18.72 C
ATOM 10 O3' G B 10 43.873 37.651 17.642 1.00 19.82 O
ATOM 11 C2' G B 10 44.117 37.589 20.054 1.00 19.58 C
ATOM 12 O2' G B 10 45.519 37.757 19.918 1.00 20.69 O
ATOM 13 C1' G B 10 43.585 38.504 21.129 1.00 19.24 C
ATOM 14 N9 G B 10 42.451 37.949 21.879 1.00 19.17 N
ATOM 15 C8 G B 10 41.115 38.285 21.845 1.00 17.47 C
ATOM 16 N7 G B 10 40.381 37.581 22.677 1.00 16.53 N
ATOM 17 C5 G B 10 41.291 36.746 23.296 1.00 17.27 C
ATOM 18 C6 G B 10 41.116 35.776 24.300 1.00 16.90 C
ATOM 19 O6 G B 10 40.087 35.421 24.876 1.00 14.34 O
ATOM 20 N1 G B 10 42.305 35.158 24.614 1.00 18.67 N
ATOM 21 C2 G B 10 43.515 35.478 24.052 1.00 19.59 C
ATOM 22 N2 G B 10 44.567 34.799 24.490 1.00 22.05 N
ATOM 23 N3 G B 10 43.702 36.380 23.130 1.00 17.36 N
ATOM 24 C4 G B 10 42.558 36.967 22.806 1.00 18.34 C
ATOM 25 P U B 11 43.338 36.411 16.778 1.00 22.39 P
ATOM 26 OP1 U B 11 43.697 36.681 15.365 1.00 24.90 O
ATOM 27 OP2 U B 11 41.911 36.092 17.087 1.00 21.69 O
ATOM 28 O5' U B 11 44.216 35.210 17.328 1.00 22.18 O
TER
Atoms:
C2: (43.680,32.636,27.136)
OP1: (43.491,29.514,34.243)
OP2: (42.575,31.823,33.573)
C4: (41.516,33.283,27.565)
O5': (43.520,30.365,31.928)
C3': (45.831,31.637,30.447)
C1': (44.791,30.951,28.456)
O4': (44.446,30.055,29.478)
C5': (44.846,29.827,31.893)
P: (42.759,30.395,33.300)
O2: (44.710,32.708,26.506)
C4': (45.445,30.192,30.558)
C2': (45.984,31.791,28.951)
O2': (47.223,31.305,28.500)
N1: (43.623,31.739,28.186)
N3: (42.621,33.392,26.840)
N4: (40.511,34.066,27.236)
C6: (42.480,31.624,28.946)
C5: (41.399,32.376,28.657)
O3': (46.985,31.923,31.212)
OP1: (43.491,29.514,34.243)
OP2: (42.575,31.823,33.573)
C4: (41.516,33.283,27.565)
O5': (43.520,30.365,31.928)
C3': (45.831,31.637,30.447)
C1': (44.791,30.951,28.456)
O4': (44.446,30.055,29.478)
C5': (44.846,29.827,31.893)
P: (42.759,30.395,33.300)
O2: (44.710,32.708,26.506)
C4': (45.445,30.192,30.558)
C2': (45.984,31.791,28.951)
O2': (47.223,31.305,28.500)
N1: (43.623,31.739,28.186)
N3: (42.621,33.392,26.840)
N4: (40.511,34.066,27.236)
C6: (42.480,31.624,28.946)
C5: (41.399,32.376,28.657)
O3': (46.985,31.923,31.212)
OP1: (39.740,40.724,16.721)
OP2: (38.622,39.715,18.782)
C3': (43.299,38.053,18.862)
C1': (43.585,38.504,21.129)
C5': (42.297,40.385,18.398)
O6: (40.087,35.421,24.876)
O4': (43.222,39.704,20.481)
C8: (41.115,38.285,21.845)
C2: (43.515,35.478,24.052)
C6: (41.116,35.776,24.300)
C5: (41.291,36.746,23.296)
C4: (42.558,36.967,22.806)
P: (39.693,40.547,18.209)
C4': (43.365,39.556,19.065)
C2': (44.117,37.589,20.054)
O2': (45.519,37.757,19.918)
N1: (42.305,35.158,24.614)
N2: (44.567,34.799,24.490)
N3: (43.702,36.380,23.130)
N7: (40.381,37.581,22.677)
N9: (42.451,37.949,21.879)
O5': (41.047,39.902,18.765)
O3': (43.873,37.651,17.642)
OP2: (38.622,39.715,18.782)
C3': (43.299,38.053,18.862)
C1': (43.585,38.504,21.129)
C5': (42.297,40.385,18.398)
O6: (40.087,35.421,24.876)
O4': (43.222,39.704,20.481)
C8: (41.115,38.285,21.845)
C2: (43.515,35.478,24.052)
C6: (41.116,35.776,24.300)
C5: (41.291,36.746,23.296)
C4: (42.558,36.967,22.806)
P: (39.693,40.547,18.209)
C4': (43.365,39.556,19.065)
C2': (44.117,37.589,20.054)
O2': (45.519,37.757,19.918)
N1: (42.305,35.158,24.614)
N2: (44.567,34.799,24.490)
N3: (43.702,36.380,23.130)
N7: (40.381,37.581,22.677)
N9: (42.451,37.949,21.879)
O5': (41.047,39.902,18.765)
O3': (43.873,37.651,17.642)
Image (generated by PyMOL):