Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1M8X:D2:D3
Extra
PDB:
ATOM 1 O3' G A 1 -6.837 1.804 0.021 1.00 68.99 O
ATOM 2 P U A 2 -5.489 2.199 0.798 1.00 70.74 P
ATOM 3 OP1 U A 2 -4.868 3.352 0.092 1.00 71.64 O
ATOM 4 OP2 U A 2 -4.705 0.953 1.014 1.00 72.70 O
ATOM 5 O5' U A 2 -5.997 2.688 2.223 1.00 64.87 O
ATOM 6 C5' U A 2 -5.089 3.208 3.177 1.00 57.61 C
ATOM 7 C4' U A 2 -5.492 4.611 3.545 1.00 56.34 C
ATOM 8 O4' U A 2 -6.877 4.620 3.980 1.00 54.06 O
ATOM 9 C3' U A 2 -4.724 5.218 4.702 1.00 53.09 C
ATOM 10 O3' U A 2 -3.520 5.791 4.222 1.00 53.65 O
ATOM 11 C2' U A 2 -5.695 6.280 5.200 1.00 52.40 C
ATOM 12 O2' U A 2 -5.660 7.445 4.404 1.00 54.56 O
ATOM 13 C1' U A 2 -7.041 5.571 5.017 1.00 52.70 C
ATOM 14 N1 U A 2 -7.493 4.858 6.219 1.00 50.10 N
ATOM 15 C2 U A 2 -8.043 5.603 7.238 1.00 49.02 C
ATOM 16 O2 U A 2 -8.164 6.817 7.175 1.00 48.84 O
ATOM 17 N3 U A 2 -8.441 4.879 8.335 1.00 46.24 N
ATOM 18 C4 U A 2 -8.344 3.515 8.510 1.00 49.94 C
ATOM 19 O4 U A 2 -8.775 3.004 9.547 1.00 53.39 O
ATOM 20 C5 U A 2 -7.763 2.813 7.411 1.00 52.26 C
ATOM 21 C6 U A 2 -7.370 3.491 6.327 1.00 52.74 C
ATOM 22 P A A 3 -2.127 5.439 4.940 1.00 53.14 P
ATOM 23 OP1 A A 3 -1.076 5.655 3.917 1.00 55.62 O
ATOM 24 OP2 A A 3 -2.247 4.114 5.603 1.00 52.74 O
ATOM 25 O5' A A 3 -1.972 6.576 6.046 1.00 50.99 O
TER
ATOM 1 O3' U B 2 -3.520 5.791 4.222 1.00 53.65 O
ATOM 2 P A B 3 -2.127 5.439 4.940 1.00 53.14 P
ATOM 3 OP1 A B 3 -1.076 5.655 3.917 1.00 55.62 O
ATOM 4 OP2 A B 3 -2.247 4.114 5.603 1.00 52.74 O
ATOM 5 O5' A B 3 -1.972 6.576 6.046 1.00 50.99 O
ATOM 6 C5' A B 3 -1.922 7.946 5.660 1.00 51.55 C
ATOM 7 C4' A B 3 -1.583 8.827 6.841 1.00 52.59 C
ATOM 8 O4' A B 3 -2.625 8.717 7.843 1.00 51.26 O
ATOM 9 C3' A B 3 -0.302 8.507 7.600 1.00 53.51 C
ATOM 10 O3' A B 3 0.829 9.102 6.962 1.00 61.99 O
ATOM 11 C2' A B 3 -0.568 9.185 8.936 1.00 50.13 C
ATOM 12 O2' A B 3 -0.359 10.582 8.870 1.00 47.64 O
ATOM 13 C1' A B 3 -2.061 8.902 9.130 1.00 48.71 C
ATOM 14 N9 A B 3 -2.311 7.698 9.918 1.00 40.82 N
ATOM 15 C8 A B 3 -2.241 6.391 9.506 1.00 38.94 C
ATOM 16 N7 A B 3 -2.527 5.524 10.448 1.00 39.26 N
ATOM 17 C5 A B 3 -2.803 6.314 11.556 1.00 36.88 C
ATOM 18 C6 A B 3 -3.173 5.999 12.872 1.00 35.85 C
ATOM 19 N6 A B 3 -3.350 4.751 13.313 1.00 29.92 N
ATOM 20 N1 A B 3 -3.362 7.023 13.733 1.00 34.75 N
ATOM 21 C2 A B 3 -3.192 8.275 13.289 1.00 37.80 C
ATOM 22 N3 A B 3 -2.851 8.699 12.072 1.00 40.69 N
ATOM 23 C4 A B 3 -2.669 7.656 11.243 1.00 39.68 C
ATOM 24 P U B 4 2.188 8.256 6.776 1.00 65.54 P
ATOM 25 OP1 U B 4 2.834 8.707 5.513 1.00 64.05 O
ATOM 26 OP2 U B 4 1.864 6.818 6.962 1.00 62.37 O
ATOM 27 O5' U B 4 3.115 8.729 7.985 1.00 69.02 O
TER
ATOM 2 P U A 2 -5.489 2.199 0.798 1.00 70.74 P
ATOM 3 OP1 U A 2 -4.868 3.352 0.092 1.00 71.64 O
ATOM 4 OP2 U A 2 -4.705 0.953 1.014 1.00 72.70 O
ATOM 5 O5' U A 2 -5.997 2.688 2.223 1.00 64.87 O
ATOM 6 C5' U A 2 -5.089 3.208 3.177 1.00 57.61 C
ATOM 7 C4' U A 2 -5.492 4.611 3.545 1.00 56.34 C
ATOM 8 O4' U A 2 -6.877 4.620 3.980 1.00 54.06 O
ATOM 9 C3' U A 2 -4.724 5.218 4.702 1.00 53.09 C
ATOM 10 O3' U A 2 -3.520 5.791 4.222 1.00 53.65 O
ATOM 11 C2' U A 2 -5.695 6.280 5.200 1.00 52.40 C
ATOM 12 O2' U A 2 -5.660 7.445 4.404 1.00 54.56 O
ATOM 13 C1' U A 2 -7.041 5.571 5.017 1.00 52.70 C
ATOM 14 N1 U A 2 -7.493 4.858 6.219 1.00 50.10 N
ATOM 15 C2 U A 2 -8.043 5.603 7.238 1.00 49.02 C
ATOM 16 O2 U A 2 -8.164 6.817 7.175 1.00 48.84 O
ATOM 17 N3 U A 2 -8.441 4.879 8.335 1.00 46.24 N
ATOM 18 C4 U A 2 -8.344 3.515 8.510 1.00 49.94 C
ATOM 19 O4 U A 2 -8.775 3.004 9.547 1.00 53.39 O
ATOM 20 C5 U A 2 -7.763 2.813 7.411 1.00 52.26 C
ATOM 21 C6 U A 2 -7.370 3.491 6.327 1.00 52.74 C
ATOM 22 P A A 3 -2.127 5.439 4.940 1.00 53.14 P
ATOM 23 OP1 A A 3 -1.076 5.655 3.917 1.00 55.62 O
ATOM 24 OP2 A A 3 -2.247 4.114 5.603 1.00 52.74 O
ATOM 25 O5' A A 3 -1.972 6.576 6.046 1.00 50.99 O
TER
ATOM 1 O3' U B 2 -3.520 5.791 4.222 1.00 53.65 O
ATOM 2 P A B 3 -2.127 5.439 4.940 1.00 53.14 P
ATOM 3 OP1 A B 3 -1.076 5.655 3.917 1.00 55.62 O
ATOM 4 OP2 A B 3 -2.247 4.114 5.603 1.00 52.74 O
ATOM 5 O5' A B 3 -1.972 6.576 6.046 1.00 50.99 O
ATOM 6 C5' A B 3 -1.922 7.946 5.660 1.00 51.55 C
ATOM 7 C4' A B 3 -1.583 8.827 6.841 1.00 52.59 C
ATOM 8 O4' A B 3 -2.625 8.717 7.843 1.00 51.26 O
ATOM 9 C3' A B 3 -0.302 8.507 7.600 1.00 53.51 C
ATOM 10 O3' A B 3 0.829 9.102 6.962 1.00 61.99 O
ATOM 11 C2' A B 3 -0.568 9.185 8.936 1.00 50.13 C
ATOM 12 O2' A B 3 -0.359 10.582 8.870 1.00 47.64 O
ATOM 13 C1' A B 3 -2.061 8.902 9.130 1.00 48.71 C
ATOM 14 N9 A B 3 -2.311 7.698 9.918 1.00 40.82 N
ATOM 15 C8 A B 3 -2.241 6.391 9.506 1.00 38.94 C
ATOM 16 N7 A B 3 -2.527 5.524 10.448 1.00 39.26 N
ATOM 17 C5 A B 3 -2.803 6.314 11.556 1.00 36.88 C
ATOM 18 C6 A B 3 -3.173 5.999 12.872 1.00 35.85 C
ATOM 19 N6 A B 3 -3.350 4.751 13.313 1.00 29.92 N
ATOM 20 N1 A B 3 -3.362 7.023 13.733 1.00 34.75 N
ATOM 21 C2 A B 3 -3.192 8.275 13.289 1.00 37.80 C
ATOM 22 N3 A B 3 -2.851 8.699 12.072 1.00 40.69 N
ATOM 23 C4 A B 3 -2.669 7.656 11.243 1.00 39.68 C
ATOM 24 P U B 4 2.188 8.256 6.776 1.00 65.54 P
ATOM 25 OP1 U B 4 2.834 8.707 5.513 1.00 64.05 O
ATOM 26 OP2 U B 4 1.864 6.818 6.962 1.00 62.37 O
ATOM 27 O5' U B 4 3.115 8.729 7.985 1.00 69.02 O
TER
Atoms:
C4: (-8.344,3.515,8.510)
N3: (-8.441,4.879,8.335)
OP1: (-4.868,3.352,0.092)
OP2: (-4.705,0.953,1.014)
C2: (-8.043,5.603,7.238)
C1': (-7.041,5.571,5.017)
C3': (-4.724,5.218,4.702)
O5': (-5.997,2.688,2.223)
O4': (-6.877,4.620,3.980)
C5': (-5.089,3.208,3.177)
P: (-5.489,2.199,0.798)
C4': (-5.492,4.611,3.545)
C2': (-5.695,6.280,5.200)
O2': (-5.660,7.445,4.404)
N1: (-7.493,4.858,6.219)
O4: (-8.775,3.004,9.547)
O2: (-8.164,6.817,7.175)
C6: (-7.370,3.491,6.327)
C5: (-7.763,2.813,7.411)
O3': (-3.520,5.791,4.222)
N3: (-8.441,4.879,8.335)
OP1: (-4.868,3.352,0.092)
OP2: (-4.705,0.953,1.014)
C2: (-8.043,5.603,7.238)
C1': (-7.041,5.571,5.017)
C3': (-4.724,5.218,4.702)
O5': (-5.997,2.688,2.223)
O4': (-6.877,4.620,3.980)
C5': (-5.089,3.208,3.177)
P: (-5.489,2.199,0.798)
C4': (-5.492,4.611,3.545)
C2': (-5.695,6.280,5.200)
O2': (-5.660,7.445,4.404)
N1: (-7.493,4.858,6.219)
O4: (-8.775,3.004,9.547)
O2: (-8.164,6.817,7.175)
C6: (-7.370,3.491,6.327)
C5: (-7.763,2.813,7.411)
O3': (-3.520,5.791,4.222)
OP1: (-1.076,5.655,3.917)
OP2: (-2.247,4.114,5.603)
C3': (-0.302,8.507,7.600)
C1': (-2.061,8.902,9.130)
C5': (-1.922,7.946,5.660)
O4': (-2.625,8.717,7.843)
C8: (-2.241,6.391,9.506)
O2': (-0.359,10.582,8.870)
C6: (-3.173,5.999,12.872)
C5: (-2.803,6.314,11.556)
C4: (-2.669,7.656,11.243)
P: (-2.127,5.439,4.940)
C4': (-1.583,8.827,6.841)
C2': (-0.568,9.185,8.936)
C2: (-3.192,8.275,13.289)
N1: (-3.362,7.023,13.733)
N3: (-2.851,8.699,12.072)
N6: (-3.350,4.751,13.313)
N7: (-2.527,5.524,10.448)
N9: (-2.311,7.698,9.918)
O5': (-1.972,6.576,6.046)
O3': (0.829,9.102,6.962)
OP2: (-2.247,4.114,5.603)
C3': (-0.302,8.507,7.600)
C1': (-2.061,8.902,9.130)
C5': (-1.922,7.946,5.660)
O4': (-2.625,8.717,7.843)
C8: (-2.241,6.391,9.506)
O2': (-0.359,10.582,8.870)
C6: (-3.173,5.999,12.872)
C5: (-2.803,6.314,11.556)
C4: (-2.669,7.656,11.243)
P: (-2.127,5.439,4.940)
C4': (-1.583,8.827,6.841)
C2': (-0.568,9.185,8.936)
C2: (-3.192,8.275,13.289)
N1: (-3.362,7.023,13.733)
N3: (-2.851,8.699,12.072)
N6: (-3.350,4.751,13.313)
N7: (-2.527,5.524,10.448)
N9: (-2.311,7.698,9.918)
O5': (-1.972,6.576,6.046)
O3': (0.829,9.102,6.962)
Image (generated by PyMOL):