Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1M8W:D0:D1
Extra
PDB:
ATOM 1 P U A 0 -6.757 -8.723 -2.735 0.72 86.40 P
ATOM 2 OP1 U A 0 -6.710 -9.153 -4.195 0.72 85.71 O
ATOM 3 OP2 U A 0 -7.602 -9.648 -1.873 0.72 85.87 O
ATOM 4 O5' U A 0 -7.508 -7.274 -2.715 0.72 83.29 O
ATOM 5 C5' U A 0 -7.327 -6.335 -3.792 0.72 80.17 C
ATOM 6 C4' U A 0 -8.360 -5.233 -3.712 0.72 77.82 C
ATOM 7 O4' U A 0 -9.693 -5.813 -3.700 0.72 77.31 O
ATOM 8 C3' U A 0 -8.325 -4.377 -2.457 0.72 75.99 C
ATOM 9 O3' U A 0 -7.344 -3.355 -2.560 0.72 73.88 O
ATOM 10 C2' U A 0 -9.738 -3.807 -2.420 0.72 75.84 C
ATOM 11 O2' U A 0 -9.919 -2.708 -3.288 0.72 75.42 O
ATOM 12 C1' U A 0 -10.558 -4.999 -2.920 0.72 76.55 C
ATOM 13 N1 U A 0 -11.097 -5.810 -1.820 0.72 75.50 N
ATOM 14 C2 U A 0 -12.307 -5.424 -1.277 0.72 74.84 C
ATOM 15 O2 U A 0 -12.936 -4.462 -1.684 0.72 73.35 O
ATOM 16 N3 U A 0 -12.753 -6.205 -0.240 0.72 74.45 N
ATOM 17 C4 U A 0 -12.124 -7.311 0.296 0.72 75.43 C
ATOM 18 O4 U A 0 -12.636 -7.893 1.254 0.72 74.56 O
ATOM 19 C5 U A 0 -10.881 -7.651 -0.327 0.72 75.24 C
ATOM 20 C6 U A 0 -10.422 -6.907 -1.339 0.72 75.08 C
ATOM 21 P G A 1 -6.611 -2.822 -1.234 0.72 72.43 P
ATOM 22 OP1 G A 1 -5.338 -2.184 -1.646 0.72 74.06 O
ATOM 23 OP2 G A 1 -6.590 -3.919 -0.233 0.72 72.67 O
ATOM 24 O5' G A 1 -7.578 -1.677 -0.698 0.72 71.58 O
TER
ATOM 1 O3' U B 0 -7.344 -3.355 -2.560 0.72 73.88 O
ATOM 2 P G B 1 -6.611 -2.822 -1.234 0.72 72.43 P
ATOM 3 OP1 G B 1 -5.338 -2.184 -1.646 0.72 74.06 O
ATOM 4 OP2 G B 1 -6.590 -3.919 -0.233 0.72 72.67 O
ATOM 5 O5' G B 1 -7.578 -1.677 -0.698 0.72 71.58 O
ATOM 6 C5' G B 1 -8.035 -0.642 -1.563 0.72 67.51 C
ATOM 7 C4' G B 1 -8.575 0.510 -0.752 0.72 65.29 C
ATOM 8 O4' G B 1 -9.728 0.065 0.010 0.72 63.88 O
ATOM 9 C3' G B 1 -7.616 1.055 0.291 0.72 64.15 C
ATOM 10 O3' G B 1 -6.747 2.021 -0.283 0.72 63.34 O
ATOM 11 C2' G B 1 -8.560 1.675 1.313 0.72 63.73 C
ATOM 12 O2' G B 1 -9.005 2.966 0.946 0.72 64.72 O
ATOM 13 C1' G B 1 -9.726 0.684 1.287 0.72 62.99 C
ATOM 14 N9 G B 1 -9.598 -0.362 2.297 0.72 61.86 N
ATOM 15 C8 G B 1 -8.632 -1.337 2.356 0.72 61.36 C
ATOM 16 N7 G B 1 -8.761 -2.125 3.388 0.72 60.86 N
ATOM 17 C5 G B 1 -9.883 -1.644 4.049 0.72 60.77 C
ATOM 18 C6 G B 1 -10.508 -2.093 5.239 0.72 59.63 C
ATOM 19 O6 G B 1 -10.186 -3.034 5.970 0.72 58.04 O
ATOM 20 N1 G B 1 -11.620 -1.322 5.554 0.72 60.20 N
ATOM 21 C2 G B 1 -12.076 -0.257 4.819 0.72 60.38 C
ATOM 22 N2 G B 1 -13.174 0.356 5.288 0.72 59.96 N
ATOM 23 N3 G B 1 -11.500 0.175 3.708 0.72 60.30 N
ATOM 24 C4 G B 1 -10.416 -0.559 3.385 0.72 61.13 C
ATOM 25 P U B 2 -5.396 2.426 0.483 0.72 63.37 P
ATOM 26 OP1 U B 2 -4.617 3.347 -0.386 0.72 63.59 O
ATOM 27 OP2 U B 2 -4.770 1.173 0.982 0.72 63.10 O
ATOM 28 O5' U B 2 -5.911 3.243 1.746 0.72 61.70 O
TER
ATOM 2 OP1 U A 0 -6.710 -9.153 -4.195 0.72 85.71 O
ATOM 3 OP2 U A 0 -7.602 -9.648 -1.873 0.72 85.87 O
ATOM 4 O5' U A 0 -7.508 -7.274 -2.715 0.72 83.29 O
ATOM 5 C5' U A 0 -7.327 -6.335 -3.792 0.72 80.17 C
ATOM 6 C4' U A 0 -8.360 -5.233 -3.712 0.72 77.82 C
ATOM 7 O4' U A 0 -9.693 -5.813 -3.700 0.72 77.31 O
ATOM 8 C3' U A 0 -8.325 -4.377 -2.457 0.72 75.99 C
ATOM 9 O3' U A 0 -7.344 -3.355 -2.560 0.72 73.88 O
ATOM 10 C2' U A 0 -9.738 -3.807 -2.420 0.72 75.84 C
ATOM 11 O2' U A 0 -9.919 -2.708 -3.288 0.72 75.42 O
ATOM 12 C1' U A 0 -10.558 -4.999 -2.920 0.72 76.55 C
ATOM 13 N1 U A 0 -11.097 -5.810 -1.820 0.72 75.50 N
ATOM 14 C2 U A 0 -12.307 -5.424 -1.277 0.72 74.84 C
ATOM 15 O2 U A 0 -12.936 -4.462 -1.684 0.72 73.35 O
ATOM 16 N3 U A 0 -12.753 -6.205 -0.240 0.72 74.45 N
ATOM 17 C4 U A 0 -12.124 -7.311 0.296 0.72 75.43 C
ATOM 18 O4 U A 0 -12.636 -7.893 1.254 0.72 74.56 O
ATOM 19 C5 U A 0 -10.881 -7.651 -0.327 0.72 75.24 C
ATOM 20 C6 U A 0 -10.422 -6.907 -1.339 0.72 75.08 C
ATOM 21 P G A 1 -6.611 -2.822 -1.234 0.72 72.43 P
ATOM 22 OP1 G A 1 -5.338 -2.184 -1.646 0.72 74.06 O
ATOM 23 OP2 G A 1 -6.590 -3.919 -0.233 0.72 72.67 O
ATOM 24 O5' G A 1 -7.578 -1.677 -0.698 0.72 71.58 O
TER
ATOM 1 O3' U B 0 -7.344 -3.355 -2.560 0.72 73.88 O
ATOM 2 P G B 1 -6.611 -2.822 -1.234 0.72 72.43 P
ATOM 3 OP1 G B 1 -5.338 -2.184 -1.646 0.72 74.06 O
ATOM 4 OP2 G B 1 -6.590 -3.919 -0.233 0.72 72.67 O
ATOM 5 O5' G B 1 -7.578 -1.677 -0.698 0.72 71.58 O
ATOM 6 C5' G B 1 -8.035 -0.642 -1.563 0.72 67.51 C
ATOM 7 C4' G B 1 -8.575 0.510 -0.752 0.72 65.29 C
ATOM 8 O4' G B 1 -9.728 0.065 0.010 0.72 63.88 O
ATOM 9 C3' G B 1 -7.616 1.055 0.291 0.72 64.15 C
ATOM 10 O3' G B 1 -6.747 2.021 -0.283 0.72 63.34 O
ATOM 11 C2' G B 1 -8.560 1.675 1.313 0.72 63.73 C
ATOM 12 O2' G B 1 -9.005 2.966 0.946 0.72 64.72 O
ATOM 13 C1' G B 1 -9.726 0.684 1.287 0.72 62.99 C
ATOM 14 N9 G B 1 -9.598 -0.362 2.297 0.72 61.86 N
ATOM 15 C8 G B 1 -8.632 -1.337 2.356 0.72 61.36 C
ATOM 16 N7 G B 1 -8.761 -2.125 3.388 0.72 60.86 N
ATOM 17 C5 G B 1 -9.883 -1.644 4.049 0.72 60.77 C
ATOM 18 C6 G B 1 -10.508 -2.093 5.239 0.72 59.63 C
ATOM 19 O6 G B 1 -10.186 -3.034 5.970 0.72 58.04 O
ATOM 20 N1 G B 1 -11.620 -1.322 5.554 0.72 60.20 N
ATOM 21 C2 G B 1 -12.076 -0.257 4.819 0.72 60.38 C
ATOM 22 N2 G B 1 -13.174 0.356 5.288 0.72 59.96 N
ATOM 23 N3 G B 1 -11.500 0.175 3.708 0.72 60.30 N
ATOM 24 C4 G B 1 -10.416 -0.559 3.385 0.72 61.13 C
ATOM 25 P U B 2 -5.396 2.426 0.483 0.72 63.37 P
ATOM 26 OP1 U B 2 -4.617 3.347 -0.386 0.72 63.59 O
ATOM 27 OP2 U B 2 -4.770 1.173 0.982 0.72 63.10 O
ATOM 28 O5' U B 2 -5.911 3.243 1.746 0.72 61.70 O
TER
Atoms:
C4: (-12.124,-7.311,0.296)
N3: (-12.753,-6.205,-0.240)
OP1: (-6.710,-9.153,-4.195)
OP2: (-7.602,-9.648,-1.873)
C2: (-12.307,-5.424,-1.277)
C1': (-10.558,-4.999,-2.920)
C3': (-8.325,-4.377,-2.457)
O5': (-7.508,-7.274,-2.715)
O4': (-9.693,-5.813,-3.700)
C5': (-7.327,-6.335,-3.792)
P: (-6.757,-8.723,-2.735)
C4': (-8.360,-5.233,-3.712)
C2': (-9.738,-3.807,-2.420)
O2': (-9.919,-2.708,-3.288)
N1: (-11.097,-5.810,-1.820)
O4: (-12.636,-7.893,1.254)
O2: (-12.936,-4.462,-1.684)
C6: (-10.422,-6.907,-1.339)
C5: (-10.881,-7.651,-0.327)
O3': (-7.344,-3.355,-2.560)
N3: (-12.753,-6.205,-0.240)
OP1: (-6.710,-9.153,-4.195)
OP2: (-7.602,-9.648,-1.873)
C2: (-12.307,-5.424,-1.277)
C1': (-10.558,-4.999,-2.920)
C3': (-8.325,-4.377,-2.457)
O5': (-7.508,-7.274,-2.715)
O4': (-9.693,-5.813,-3.700)
C5': (-7.327,-6.335,-3.792)
P: (-6.757,-8.723,-2.735)
C4': (-8.360,-5.233,-3.712)
C2': (-9.738,-3.807,-2.420)
O2': (-9.919,-2.708,-3.288)
N1: (-11.097,-5.810,-1.820)
O4: (-12.636,-7.893,1.254)
O2: (-12.936,-4.462,-1.684)
C6: (-10.422,-6.907,-1.339)
C5: (-10.881,-7.651,-0.327)
O3': (-7.344,-3.355,-2.560)
OP1: (-5.338,-2.184,-1.646)
OP2: (-6.590,-3.919,-0.233)
C3': (-7.616,1.055,0.291)
C1': (-9.726,0.684,1.287)
C5': (-8.035,-0.642,-1.563)
O6: (-10.186,-3.034,5.970)
O4': (-9.728,0.065,0.010)
C8: (-8.632,-1.337,2.356)
C2: (-12.076,-0.257,4.819)
C6: (-10.508,-2.093,5.239)
C5: (-9.883,-1.644,4.049)
C4: (-10.416,-0.559,3.385)
P: (-6.611,-2.822,-1.234)
C4': (-8.575,0.510,-0.752)
C2': (-8.560,1.675,1.313)
O2': (-9.005,2.966,0.946)
N1: (-11.620,-1.322,5.554)
N2: (-13.174,0.356,5.288)
N3: (-11.500,0.175,3.708)
N7: (-8.761,-2.125,3.388)
N9: (-9.598,-0.362,2.297)
O5': (-7.578,-1.677,-0.698)
O3': (-6.747,2.021,-0.283)
OP2: (-6.590,-3.919,-0.233)
C3': (-7.616,1.055,0.291)
C1': (-9.726,0.684,1.287)
C5': (-8.035,-0.642,-1.563)
O6: (-10.186,-3.034,5.970)
O4': (-9.728,0.065,0.010)
C8: (-8.632,-1.337,2.356)
C2: (-12.076,-0.257,4.819)
C6: (-10.508,-2.093,5.239)
C5: (-9.883,-1.644,4.049)
C4: (-10.416,-0.559,3.385)
P: (-6.611,-2.822,-1.234)
C4': (-8.575,0.510,-0.752)
C2': (-8.560,1.675,1.313)
O2': (-9.005,2.966,0.946)
N1: (-11.620,-1.322,5.554)
N2: (-13.174,0.356,5.288)
N3: (-11.500,0.175,3.708)
N7: (-8.761,-2.125,3.388)
N9: (-9.598,-0.362,2.297)
O5': (-7.578,-1.677,-0.698)
O3': (-6.747,2.021,-0.283)
Image (generated by PyMOL):