Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1M8X:D0:D1
Extra
PDB:
ATOM 1 P U A 0 -6.788 -8.980 -3.047 1.00 98.05 P
ATOM 2 OP1 U A 0 -5.325 -8.902 -2.632 1.00 96.77 O
ATOM 3 OP2 U A 0 -6.976 -9.304 -4.524 1.00 96.67 O
ATOM 4 O5' U A 0 -7.412 -7.487 -2.832 1.00 93.56 O
ATOM 5 C5' U A 0 -7.236 -6.464 -3.832 1.00 88.59 C
ATOM 6 C4' U A 0 -8.235 -5.343 -3.631 1.00 84.93 C
ATOM 7 O4' U A 0 -9.585 -5.879 -3.651 1.00 84.54 O
ATOM 8 C3' U A 0 -8.162 -4.587 -2.313 1.00 81.85 C
ATOM 9 O3' U A 0 -7.166 -3.569 -2.352 1.00 79.09 O
ATOM 10 C2' U A 0 -9.553 -3.975 -2.225 1.00 81.29 C
ATOM 11 O2' U A 0 -9.674 -2.811 -3.011 1.00 80.89 O
ATOM 12 C1' U A 0 -10.420 -5.088 -2.820 1.00 82.78 C
ATOM 13 N1 U A 0 -11.020 -5.953 -1.794 1.00 83.01 N
ATOM 14 C2 U A 0 -12.234 -5.562 -1.258 1.00 81.62 C
ATOM 15 O2 U A 0 -12.819 -4.553 -1.612 1.00 80.31 O
ATOM 16 N3 U A 0 -12.738 -6.397 -0.293 1.00 81.58 N
ATOM 17 C4 U A 0 -12.165 -7.564 0.181 1.00 83.44 C
ATOM 18 O4 U A 0 -12.742 -8.213 1.060 1.00 77.74 O
ATOM 19 C5 U A 0 -10.913 -7.902 -0.430 1.00 83.03 C
ATOM 20 C6 U A 0 -10.397 -7.104 -1.373 1.00 82.93 C
ATOM 21 P G A 1 -6.511 -3.041 -0.979 1.00 77.09 P
ATOM 22 OP1 G A 1 -5.230 -2.362 -1.303 1.00 76.40 O
ATOM 23 OP2 G A 1 -6.523 -4.159 -0.001 1.00 77.74 O
ATOM 24 O5' G A 1 -7.529 -1.931 -0.463 1.00 76.42 O
TER
ATOM 1 O3' U B 0 -7.166 -3.569 -2.352 1.00 79.09 O
ATOM 2 P G B 1 -6.511 -3.041 -0.979 1.00 77.09 P
ATOM 3 OP1 G B 1 -5.230 -2.362 -1.303 1.00 76.40 O
ATOM 4 OP2 G B 1 -6.523 -4.159 -0.001 1.00 77.74 O
ATOM 5 O5' G B 1 -7.529 -1.931 -0.463 1.00 76.42 O
ATOM 6 C5' G B 1 -7.976 -0.893 -1.327 1.00 72.17 C
ATOM 7 C4' G B 1 -8.584 0.229 -0.522 1.00 68.86 C
ATOM 8 O4' G B 1 -9.737 -0.271 0.202 1.00 68.36 O
ATOM 9 C3' G B 1 -7.689 0.804 0.559 1.00 67.57 C
ATOM 10 O3' G B 1 -6.837 1.804 0.021 1.00 68.99 O
ATOM 11 C2' G B 1 -8.698 1.396 1.534 1.00 66.60 C
ATOM 12 O2' G B 1 -9.195 2.654 1.118 1.00 64.79 O
ATOM 13 C1' G B 1 -9.814 0.356 1.473 1.00 66.01 C
ATOM 14 N9 G B 1 -9.691 -0.676 2.499 1.00 63.75 N
ATOM 15 C8 G B 1 -8.731 -1.654 2.583 1.00 62.94 C
ATOM 16 N7 G B 1 -8.889 -2.440 3.612 1.00 62.55 N
ATOM 17 C5 G B 1 -10.019 -1.948 4.248 1.00 63.21 C
ATOM 18 C6 G B 1 -10.676 -2.389 5.418 1.00 62.24 C
ATOM 19 O6 G B 1 -10.385 -3.331 6.153 1.00 62.61 O
ATOM 20 N1 G B 1 -11.789 -1.607 5.706 1.00 64.01 N
ATOM 21 C2 G B 1 -12.220 -0.540 4.962 1.00 61.26 C
ATOM 22 N2 G B 1 -13.323 0.077 5.404 1.00 60.56 N
ATOM 23 N3 G B 1 -11.614 -0.114 3.868 1.00 62.31 N
ATOM 24 C4 G B 1 -10.527 -0.858 3.572 1.00 64.05 C
ATOM 25 P U B 2 -5.489 2.199 0.798 1.00 70.74 P
ATOM 26 OP1 U B 2 -4.868 3.352 0.092 1.00 71.64 O
ATOM 27 OP2 U B 2 -4.705 0.953 1.014 1.00 72.70 O
ATOM 28 O5' U B 2 -5.997 2.688 2.223 1.00 64.87 O
TER
ATOM 2 OP1 U A 0 -5.325 -8.902 -2.632 1.00 96.77 O
ATOM 3 OP2 U A 0 -6.976 -9.304 -4.524 1.00 96.67 O
ATOM 4 O5' U A 0 -7.412 -7.487 -2.832 1.00 93.56 O
ATOM 5 C5' U A 0 -7.236 -6.464 -3.832 1.00 88.59 C
ATOM 6 C4' U A 0 -8.235 -5.343 -3.631 1.00 84.93 C
ATOM 7 O4' U A 0 -9.585 -5.879 -3.651 1.00 84.54 O
ATOM 8 C3' U A 0 -8.162 -4.587 -2.313 1.00 81.85 C
ATOM 9 O3' U A 0 -7.166 -3.569 -2.352 1.00 79.09 O
ATOM 10 C2' U A 0 -9.553 -3.975 -2.225 1.00 81.29 C
ATOM 11 O2' U A 0 -9.674 -2.811 -3.011 1.00 80.89 O
ATOM 12 C1' U A 0 -10.420 -5.088 -2.820 1.00 82.78 C
ATOM 13 N1 U A 0 -11.020 -5.953 -1.794 1.00 83.01 N
ATOM 14 C2 U A 0 -12.234 -5.562 -1.258 1.00 81.62 C
ATOM 15 O2 U A 0 -12.819 -4.553 -1.612 1.00 80.31 O
ATOM 16 N3 U A 0 -12.738 -6.397 -0.293 1.00 81.58 N
ATOM 17 C4 U A 0 -12.165 -7.564 0.181 1.00 83.44 C
ATOM 18 O4 U A 0 -12.742 -8.213 1.060 1.00 77.74 O
ATOM 19 C5 U A 0 -10.913 -7.902 -0.430 1.00 83.03 C
ATOM 20 C6 U A 0 -10.397 -7.104 -1.373 1.00 82.93 C
ATOM 21 P G A 1 -6.511 -3.041 -0.979 1.00 77.09 P
ATOM 22 OP1 G A 1 -5.230 -2.362 -1.303 1.00 76.40 O
ATOM 23 OP2 G A 1 -6.523 -4.159 -0.001 1.00 77.74 O
ATOM 24 O5' G A 1 -7.529 -1.931 -0.463 1.00 76.42 O
TER
ATOM 1 O3' U B 0 -7.166 -3.569 -2.352 1.00 79.09 O
ATOM 2 P G B 1 -6.511 -3.041 -0.979 1.00 77.09 P
ATOM 3 OP1 G B 1 -5.230 -2.362 -1.303 1.00 76.40 O
ATOM 4 OP2 G B 1 -6.523 -4.159 -0.001 1.00 77.74 O
ATOM 5 O5' G B 1 -7.529 -1.931 -0.463 1.00 76.42 O
ATOM 6 C5' G B 1 -7.976 -0.893 -1.327 1.00 72.17 C
ATOM 7 C4' G B 1 -8.584 0.229 -0.522 1.00 68.86 C
ATOM 8 O4' G B 1 -9.737 -0.271 0.202 1.00 68.36 O
ATOM 9 C3' G B 1 -7.689 0.804 0.559 1.00 67.57 C
ATOM 10 O3' G B 1 -6.837 1.804 0.021 1.00 68.99 O
ATOM 11 C2' G B 1 -8.698 1.396 1.534 1.00 66.60 C
ATOM 12 O2' G B 1 -9.195 2.654 1.118 1.00 64.79 O
ATOM 13 C1' G B 1 -9.814 0.356 1.473 1.00 66.01 C
ATOM 14 N9 G B 1 -9.691 -0.676 2.499 1.00 63.75 N
ATOM 15 C8 G B 1 -8.731 -1.654 2.583 1.00 62.94 C
ATOM 16 N7 G B 1 -8.889 -2.440 3.612 1.00 62.55 N
ATOM 17 C5 G B 1 -10.019 -1.948 4.248 1.00 63.21 C
ATOM 18 C6 G B 1 -10.676 -2.389 5.418 1.00 62.24 C
ATOM 19 O6 G B 1 -10.385 -3.331 6.153 1.00 62.61 O
ATOM 20 N1 G B 1 -11.789 -1.607 5.706 1.00 64.01 N
ATOM 21 C2 G B 1 -12.220 -0.540 4.962 1.00 61.26 C
ATOM 22 N2 G B 1 -13.323 0.077 5.404 1.00 60.56 N
ATOM 23 N3 G B 1 -11.614 -0.114 3.868 1.00 62.31 N
ATOM 24 C4 G B 1 -10.527 -0.858 3.572 1.00 64.05 C
ATOM 25 P U B 2 -5.489 2.199 0.798 1.00 70.74 P
ATOM 26 OP1 U B 2 -4.868 3.352 0.092 1.00 71.64 O
ATOM 27 OP2 U B 2 -4.705 0.953 1.014 1.00 72.70 O
ATOM 28 O5' U B 2 -5.997 2.688 2.223 1.00 64.87 O
TER
Atoms:
C4: (-12.165,-7.564,0.181)
N3: (-12.738,-6.397,-0.293)
OP1: (-5.325,-8.902,-2.632)
OP2: (-6.976,-9.304,-4.524)
C2: (-12.234,-5.562,-1.258)
C1': (-10.420,-5.088,-2.820)
C3': (-8.162,-4.587,-2.313)
O5': (-7.412,-7.487,-2.832)
O4': (-9.585,-5.879,-3.651)
C5': (-7.236,-6.464,-3.832)
P: (-6.788,-8.980,-3.047)
C4': (-8.235,-5.343,-3.631)
C2': (-9.553,-3.975,-2.225)
O2': (-9.674,-2.811,-3.011)
N1: (-11.020,-5.953,-1.794)
O4: (-12.742,-8.213,1.060)
O2: (-12.819,-4.553,-1.612)
C6: (-10.397,-7.104,-1.373)
C5: (-10.913,-7.902,-0.430)
O3': (-7.166,-3.569,-2.352)
N3: (-12.738,-6.397,-0.293)
OP1: (-5.325,-8.902,-2.632)
OP2: (-6.976,-9.304,-4.524)
C2: (-12.234,-5.562,-1.258)
C1': (-10.420,-5.088,-2.820)
C3': (-8.162,-4.587,-2.313)
O5': (-7.412,-7.487,-2.832)
O4': (-9.585,-5.879,-3.651)
C5': (-7.236,-6.464,-3.832)
P: (-6.788,-8.980,-3.047)
C4': (-8.235,-5.343,-3.631)
C2': (-9.553,-3.975,-2.225)
O2': (-9.674,-2.811,-3.011)
N1: (-11.020,-5.953,-1.794)
O4: (-12.742,-8.213,1.060)
O2: (-12.819,-4.553,-1.612)
C6: (-10.397,-7.104,-1.373)
C5: (-10.913,-7.902,-0.430)
O3': (-7.166,-3.569,-2.352)
OP1: (-5.230,-2.362,-1.303)
OP2: (-6.523,-4.159,-0.001)
C3': (-7.689,0.804,0.559)
C1': (-9.814,0.356,1.473)
C5': (-7.976,-0.893,-1.327)
O6: (-10.385,-3.331,6.153)
O4': (-9.737,-0.271,0.202)
C8: (-8.731,-1.654,2.583)
C2: (-12.220,-0.540,4.962)
C6: (-10.676,-2.389,5.418)
C5: (-10.019,-1.948,4.248)
C4: (-10.527,-0.858,3.572)
P: (-6.511,-3.041,-0.979)
C4': (-8.584,0.229,-0.522)
C2': (-8.698,1.396,1.534)
O2': (-9.195,2.654,1.118)
N1: (-11.789,-1.607,5.706)
N2: (-13.323,0.077,5.404)
N3: (-11.614,-0.114,3.868)
N7: (-8.889,-2.440,3.612)
N9: (-9.691,-0.676,2.499)
O5': (-7.529,-1.931,-0.463)
O3': (-6.837,1.804,0.021)
OP2: (-6.523,-4.159,-0.001)
C3': (-7.689,0.804,0.559)
C1': (-9.814,0.356,1.473)
C5': (-7.976,-0.893,-1.327)
O6: (-10.385,-3.331,6.153)
O4': (-9.737,-0.271,0.202)
C8: (-8.731,-1.654,2.583)
C2: (-12.220,-0.540,4.962)
C6: (-10.676,-2.389,5.418)
C5: (-10.019,-1.948,4.248)
C4: (-10.527,-0.858,3.572)
P: (-6.511,-3.041,-0.979)
C4': (-8.584,0.229,-0.522)
C2': (-8.698,1.396,1.534)
O2': (-9.195,2.654,1.118)
N1: (-11.789,-1.607,5.706)
N2: (-13.323,0.077,5.404)
N3: (-11.614,-0.114,3.868)
N7: (-8.889,-2.440,3.612)
N9: (-9.691,-0.676,2.499)
O5': (-7.529,-1.931,-0.463)
O3': (-6.837,1.804,0.021)
Image (generated by PyMOL):