Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1M8Y:D8:D9
Extra
PDB:
ATOM 1 O3' A A 7 30.128 -4.618 18.658 1.00 50.94 O
ATOM 2 P U A 8 28.606 -4.886 19.090 1.00 53.37 P
ATOM 3 OP1 U A 8 28.042 -5.821 18.083 1.00 51.83 O
ATOM 4 OP2 U A 8 27.944 -3.575 19.338 1.00 48.66 O
ATOM 5 O5' U A 8 28.730 -5.623 20.496 1.00 53.06 O
ATOM 6 C5' U A 8 27.618 -6.297 21.070 1.00 51.83 C
ATOM 7 C4' U A 8 28.049 -7.647 21.580 1.00 50.98 C
ATOM 8 O4' U A 8 28.993 -7.474 22.660 1.00 49.87 O
ATOM 9 C3' U A 8 26.955 -8.509 22.181 1.00 51.07 C
ATOM 10 O3' U A 8 26.339 -9.240 21.135 1.00 51.54 O
ATOM 11 C2' U A 8 27.744 -9.464 23.067 1.00 50.03 C
ATOM 12 O2' U A 8 28.267 -10.533 22.304 1.00 52.58 O
ATOM 13 C1' U A 8 28.892 -8.570 23.545 1.00 46.56 C
ATOM 14 N1 U A 8 28.786 -8.056 24.917 1.00 40.53 N
ATOM 15 C2 U A 8 29.138 -8.910 25.939 1.00 37.78 C
ATOM 16 O2 U A 8 29.438 -10.070 25.753 1.00 37.42 O
ATOM 17 N3 U A 8 29.123 -8.357 27.189 1.00 35.55 N
ATOM 18 C4 U A 8 28.789 -7.070 27.522 1.00 34.41 C
ATOM 19 O4 U A 8 29.005 -6.681 28.667 1.00 33.72 O
ATOM 20 C5 U A 8 28.376 -6.256 26.420 1.00 34.12 C
ATOM 21 C6 U A 8 28.389 -6.766 25.183 1.00 37.47 C
ATOM 22 P A A 9 24.744 -9.349 21.069 1.00 53.39 P
ATOM 23 OP1 A A 9 24.420 -9.888 19.721 1.00 52.15 O
ATOM 24 OP2 A A 9 24.157 -8.056 21.503 1.00 51.14 O
ATOM 25 O5' A A 9 24.395 -10.445 22.169 1.00 53.68 O
TER
ATOM 1 O3' U B 8 26.339 -9.240 21.135 1.00 51.54 O
ATOM 2 P A B 9 24.744 -9.349 21.069 1.00 53.39 P
ATOM 3 OP1 A B 9 24.420 -9.888 19.721 1.00 52.15 O
ATOM 4 OP2 A B 9 24.157 -8.056 21.503 1.00 51.14 O
ATOM 5 O5' A B 9 24.395 -10.445 22.169 1.00 53.68 O
ATOM 6 C5' A B 9 24.225 -11.811 21.807 1.00 53.58 C
ATOM 7 C4' A B 9 23.211 -12.466 22.713 1.00 52.52 C
ATOM 8 O4' A B 9 23.720 -12.480 24.070 1.00 52.31 O
ATOM 9 C3' A B 9 21.875 -11.754 22.865 1.00 51.79 C
ATOM 10 O3' A B 9 20.970 -11.897 21.767 1.00 49.94 O
ATOM 11 C2' A B 9 21.340 -12.357 24.157 1.00 51.60 C
ATOM 12 O2' A B 9 20.724 -13.613 23.953 1.00 54.16 O
ATOM 13 C1' A B 9 22.629 -12.528 24.971 1.00 49.98 C
ATOM 14 N9 A B 9 22.812 -11.502 25.996 1.00 45.04 N
ATOM 15 C8 A B 9 22.906 -10.141 25.850 1.00 43.87 C
ATOM 16 N7 A B 9 23.004 -9.493 26.989 1.00 43.58 N
ATOM 17 C5 A B 9 22.987 -10.500 27.948 1.00 42.50 C
ATOM 18 C6 A B 9 23.053 -10.477 29.358 1.00 40.84 C
ATOM 19 N6 A B 9 23.141 -9.361 30.084 1.00 39.84 N
ATOM 20 N1 A B 9 23.022 -11.661 30.005 1.00 41.14 N
ATOM 21 C2 A B 9 22.929 -12.785 29.282 1.00 41.87 C
ATOM 22 N3 A B 9 22.855 -12.936 27.963 1.00 41.24 N
ATOM 23 C4 A B 9 22.887 -11.743 27.347 1.00 43.13 C
TER
ATOM 2 P U A 8 28.606 -4.886 19.090 1.00 53.37 P
ATOM 3 OP1 U A 8 28.042 -5.821 18.083 1.00 51.83 O
ATOM 4 OP2 U A 8 27.944 -3.575 19.338 1.00 48.66 O
ATOM 5 O5' U A 8 28.730 -5.623 20.496 1.00 53.06 O
ATOM 6 C5' U A 8 27.618 -6.297 21.070 1.00 51.83 C
ATOM 7 C4' U A 8 28.049 -7.647 21.580 1.00 50.98 C
ATOM 8 O4' U A 8 28.993 -7.474 22.660 1.00 49.87 O
ATOM 9 C3' U A 8 26.955 -8.509 22.181 1.00 51.07 C
ATOM 10 O3' U A 8 26.339 -9.240 21.135 1.00 51.54 O
ATOM 11 C2' U A 8 27.744 -9.464 23.067 1.00 50.03 C
ATOM 12 O2' U A 8 28.267 -10.533 22.304 1.00 52.58 O
ATOM 13 C1' U A 8 28.892 -8.570 23.545 1.00 46.56 C
ATOM 14 N1 U A 8 28.786 -8.056 24.917 1.00 40.53 N
ATOM 15 C2 U A 8 29.138 -8.910 25.939 1.00 37.78 C
ATOM 16 O2 U A 8 29.438 -10.070 25.753 1.00 37.42 O
ATOM 17 N3 U A 8 29.123 -8.357 27.189 1.00 35.55 N
ATOM 18 C4 U A 8 28.789 -7.070 27.522 1.00 34.41 C
ATOM 19 O4 U A 8 29.005 -6.681 28.667 1.00 33.72 O
ATOM 20 C5 U A 8 28.376 -6.256 26.420 1.00 34.12 C
ATOM 21 C6 U A 8 28.389 -6.766 25.183 1.00 37.47 C
ATOM 22 P A A 9 24.744 -9.349 21.069 1.00 53.39 P
ATOM 23 OP1 A A 9 24.420 -9.888 19.721 1.00 52.15 O
ATOM 24 OP2 A A 9 24.157 -8.056 21.503 1.00 51.14 O
ATOM 25 O5' A A 9 24.395 -10.445 22.169 1.00 53.68 O
TER
ATOM 1 O3' U B 8 26.339 -9.240 21.135 1.00 51.54 O
ATOM 2 P A B 9 24.744 -9.349 21.069 1.00 53.39 P
ATOM 3 OP1 A B 9 24.420 -9.888 19.721 1.00 52.15 O
ATOM 4 OP2 A B 9 24.157 -8.056 21.503 1.00 51.14 O
ATOM 5 O5' A B 9 24.395 -10.445 22.169 1.00 53.68 O
ATOM 6 C5' A B 9 24.225 -11.811 21.807 1.00 53.58 C
ATOM 7 C4' A B 9 23.211 -12.466 22.713 1.00 52.52 C
ATOM 8 O4' A B 9 23.720 -12.480 24.070 1.00 52.31 O
ATOM 9 C3' A B 9 21.875 -11.754 22.865 1.00 51.79 C
ATOM 10 O3' A B 9 20.970 -11.897 21.767 1.00 49.94 O
ATOM 11 C2' A B 9 21.340 -12.357 24.157 1.00 51.60 C
ATOM 12 O2' A B 9 20.724 -13.613 23.953 1.00 54.16 O
ATOM 13 C1' A B 9 22.629 -12.528 24.971 1.00 49.98 C
ATOM 14 N9 A B 9 22.812 -11.502 25.996 1.00 45.04 N
ATOM 15 C8 A B 9 22.906 -10.141 25.850 1.00 43.87 C
ATOM 16 N7 A B 9 23.004 -9.493 26.989 1.00 43.58 N
ATOM 17 C5 A B 9 22.987 -10.500 27.948 1.00 42.50 C
ATOM 18 C6 A B 9 23.053 -10.477 29.358 1.00 40.84 C
ATOM 19 N6 A B 9 23.141 -9.361 30.084 1.00 39.84 N
ATOM 20 N1 A B 9 23.022 -11.661 30.005 1.00 41.14 N
ATOM 21 C2 A B 9 22.929 -12.785 29.282 1.00 41.87 C
ATOM 22 N3 A B 9 22.855 -12.936 27.963 1.00 41.24 N
ATOM 23 C4 A B 9 22.887 -11.743 27.347 1.00 43.13 C
TER
Atoms:
C4: (28.789,-7.070,27.522)
N3: (29.123,-8.357,27.189)
OP1: (28.042,-5.821,18.083)
OP2: (27.944,-3.575,19.338)
C2: (29.138,-8.910,25.939)
C1': (28.892,-8.570,23.545)
C3': (26.955,-8.509,22.181)
O5': (28.730,-5.623,20.496)
O4': (28.993,-7.474,22.660)
C5': (27.618,-6.297,21.070)
P: (28.606,-4.886,19.090)
C4': (28.049,-7.647,21.580)
C2': (27.744,-9.464,23.067)
O2': (28.267,-10.533,22.304)
N1: (28.786,-8.056,24.917)
O4: (29.005,-6.681,28.667)
O2: (29.438,-10.070,25.753)
C6: (28.389,-6.766,25.183)
C5: (28.376,-6.256,26.420)
O3': (26.339,-9.240,21.135)
N3: (29.123,-8.357,27.189)
OP1: (28.042,-5.821,18.083)
OP2: (27.944,-3.575,19.338)
C2: (29.138,-8.910,25.939)
C1': (28.892,-8.570,23.545)
C3': (26.955,-8.509,22.181)
O5': (28.730,-5.623,20.496)
O4': (28.993,-7.474,22.660)
C5': (27.618,-6.297,21.070)
P: (28.606,-4.886,19.090)
C4': (28.049,-7.647,21.580)
C2': (27.744,-9.464,23.067)
O2': (28.267,-10.533,22.304)
N1: (28.786,-8.056,24.917)
O4: (29.005,-6.681,28.667)
O2: (29.438,-10.070,25.753)
C6: (28.389,-6.766,25.183)
C5: (28.376,-6.256,26.420)
O3': (26.339,-9.240,21.135)
OP1: (24.420,-9.888,19.721)
OP2: (24.157,-8.056,21.503)
C3': (21.875,-11.754,22.865)
C1': (22.629,-12.528,24.971)
C5': (24.225,-11.811,21.807)
O4': (23.720,-12.480,24.070)
C8: (22.906,-10.141,25.850)
O2': (20.724,-13.613,23.953)
C6: (23.053,-10.477,29.358)
C5: (22.987,-10.500,27.948)
C4: (22.887,-11.743,27.347)
P: (24.744,-9.349,21.069)
C4': (23.211,-12.466,22.713)
C2': (21.340,-12.357,24.157)
C2: (22.929,-12.785,29.282)
N1: (23.022,-11.661,30.005)
N3: (22.855,-12.936,27.963)
N6: (23.141,-9.361,30.084)
N7: (23.004,-9.493,26.989)
N9: (22.812,-11.502,25.996)
O5': (24.395,-10.445,22.169)
O3': (20.970,-11.897,21.767)
OP2: (24.157,-8.056,21.503)
C3': (21.875,-11.754,22.865)
C1': (22.629,-12.528,24.971)
C5': (24.225,-11.811,21.807)
O4': (23.720,-12.480,24.070)
C8: (22.906,-10.141,25.850)
O2': (20.724,-13.613,23.953)
C6: (23.053,-10.477,29.358)
C5: (22.987,-10.500,27.948)
C4: (22.887,-11.743,27.347)
P: (24.744,-9.349,21.069)
C4': (23.211,-12.466,22.713)
C2': (21.340,-12.357,24.157)
C2: (22.929,-12.785,29.282)
N1: (23.022,-11.661,30.005)
N3: (22.855,-12.936,27.963)
N6: (23.141,-9.361,30.084)
N7: (23.004,-9.493,26.989)
N9: (22.812,-11.502,25.996)
O5': (24.395,-10.445,22.169)
O3': (20.970,-11.897,21.767)
Image (generated by PyMOL):