ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3K49:F4:F5

Extra

PDB:
ATOM 1 O3' G A 3 13.136 13.073 -14.610 1.00 92.01 O
ATOM 2 P U A 4 13.990 12.137 -15.592 1.00 79.99 P
ATOM 3 OP1 U A 4 13.289 10.835 -15.712 1.00 61.33 O
ATOM 4 OP2 U A 4 15.403 12.198 -15.152 1.00 60.36 O
ATOM 5 O5' U A 4 13.900 12.899 -16.987 1.00 83.15 O
ATOM 6 C5' U A 4 14.795 12.577 -18.032 1.00 66.57 C
ATOM 7 C4' U A 4 14.041 12.559 -19.337 1.00 65.78 C
ATOM 8 O4' U A 4 13.661 13.908 -19.689 1.00 61.63 O
ATOM 9 C3' U A 4 14.826 12.078 -20.538 1.00 55.89 C
ATOM 10 O3' U A 4 14.854 10.657 -20.527 1.00 63.87 O
ATOM 11 C2' U A 4 13.988 12.652 -21.678 1.00 56.01 C
ATOM 12 O2' U A 4 12.825 11.896 -21.952 1.00 56.79 O
ATOM 13 C1' U A 4 13.570 14.008 -21.095 1.00 58.63 C
ATOM 14 N1 U A 4 14.399 15.146 -21.538 1.00 45.69 N
ATOM 15 C2 U A 4 13.981 15.828 -22.644 1.00 45.08 C
ATOM 16 O2 U A 4 12.962 15.536 -23.235 1.00 43.58 O
ATOM 17 N3 U A 4 14.793 16.867 -23.031 1.00 37.57 N
ATOM 18 C4 U A 4 15.952 17.282 -22.417 1.00 43.15 C
ATOM 19 O4 U A 4 16.575 18.237 -22.869 1.00 52.39 O
ATOM 20 C5 U A 4 16.317 16.522 -21.261 1.00 41.95 C
ATOM 21 C6 U A 4 15.548 15.506 -20.871 1.00 45.39 C
ATOM 22 P A A 5 16.192 9.868 -20.961 1.00 66.83 P
ATOM 23 OP1 A A 5 16.138 8.525 -20.337 1.00 71.58 O
ATOM 24 OP2 A A 5 17.375 10.729 -20.723 1.00 49.93 O
ATOM 25 O5' A A 5 16.026 9.719 -22.543 1.00 51.90 O
TER

ATOM 1 O3' U B 4 14.854 10.657 -20.527 1.00 63.87 O
ATOM 2 P A B 5 16.192 9.868 -20.961 1.00 66.83 P
ATOM 3 OP1 A B 5 16.138 8.525 -20.337 1.00 71.58 O
ATOM 4 OP2 A B 5 17.375 10.729 -20.723 1.00 49.93 O
ATOM 5 O5' A B 5 16.026 9.719 -22.543 1.00 51.90 O
ATOM 6 C5' A B 5 14.825 9.200 -23.088 1.00 48.22 C
ATOM 7 C4' A B 5 14.929 9.123 -24.601 1.00 61.83 C
ATOM 8 O4' A B 5 15.093 10.447 -25.166 1.00 53.98 O
ATOM 9 C3' A B 5 16.118 8.352 -25.166 1.00 61.58 C
ATOM 10 O3' A B 5 15.844 6.951 -25.158 1.00 66.48 O
ATOM 11 C2' A B 5 16.160 8.869 -26.596 1.00 56.18 C
ATOM 12 O2' A B 5 15.202 8.202 -27.391 1.00 62.03 O
ATOM 13 C1' A B 5 15.752 10.332 -26.418 1.00 51.10 C
ATOM 14 N9 A B 5 16.873 11.271 -26.441 1.00 40.51 N
ATOM 15 C8 A B 5 17.761 11.539 -25.432 1.00 41.33 C
ATOM 16 N7 A B 5 18.671 12.434 -25.742 1.00 40.57 N
ATOM 17 C5 A B 5 18.356 12.776 -27.045 1.00 30.74 C
ATOM 18 C6 A B 5 18.946 13.680 -27.937 1.00 35.20 C
ATOM 19 N6 A B 5 20.003 14.438 -27.617 1.00 29.60 N
ATOM 20 N1 A B 5 18.405 13.786 -29.166 1.00 33.88 N
ATOM 21 C2 A B 5 17.328 13.035 -29.461 1.00 42.77 C
ATOM 22 N3 A B 5 16.669 12.159 -28.698 1.00 37.41 N
ATOM 23 C4 A B 5 17.251 12.074 -27.490 1.00 33.84 C
ATOM 24 P A B 6 17.052 5.891 -25.123 1.00 67.19 P
ATOM 25 OP1 A B 6 16.469 4.611 -24.647 1.00 77.97 O
ATOM 26 OP2 A B 6 18.202 6.487 -24.403 1.00 55.84 O
ATOM 27 O5' A B 6 17.468 5.706 -26.658 1.00 54.29 O
TER

Atoms:
C4: (15.952,17.282,-22.417)
N3: (14.793,16.867,-23.031)
OP1: (13.289,10.835,-15.712)
OP2: (15.403,12.198,-15.152)
C2: (13.981,15.828,-22.644)
C1': (13.570,14.008,-21.095)
C3': (14.826,12.078,-20.538)
O5': (13.900,12.899,-16.987)
O4': (13.661,13.908,-19.689)
C5': (14.795,12.577,-18.032)
P: (13.990,12.137,-15.592)
C4': (14.041,12.559,-19.337)
C2': (13.988,12.652,-21.678)
O2': (12.825,11.896,-21.952)
N1: (14.399,15.146,-21.538)
O4: (16.575,18.237,-22.869)
O2: (12.962,15.536,-23.235)
C6: (15.548,15.506,-20.871)
C5: (16.317,16.522,-21.261)
O3': (14.854,10.657,-20.527)
OP1: (16.138,8.525,-20.337)
OP2: (17.375,10.729,-20.723)
C3': (16.118,8.352,-25.166)
C1': (15.752,10.332,-26.418)
C5': (14.825,9.200,-23.088)
O4': (15.093,10.447,-25.166)
C8: (17.761,11.539,-25.432)
O2': (15.202,8.202,-27.391)
C6: (18.946,13.680,-27.937)
C5: (18.356,12.776,-27.045)
C4: (17.251,12.074,-27.490)
P: (16.192,9.868,-20.961)
C4': (14.929,9.123,-24.601)
C2': (16.160,8.869,-26.596)
C2: (17.328,13.035,-29.461)
N1: (18.405,13.786,-29.166)
N3: (16.669,12.159,-28.698)
N6: (20.003,14.438,-27.617)
N7: (18.671,12.434,-25.742)
N9: (16.873,11.271,-26.441)
O5': (16.026,9.719,-22.543)
O3': (15.844,6.951,-25.158)
Image (generated by PyMOL):
PyMOL image
show in jmol