ClaRNA

Doublet info:

Details

Nucleotide types: CG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OHY:A165:A135

Extra

PDB:
ATOM 1 O3' C A 164 26.535 -14.248 80.021 1.00107.46 O
ATOM 2 P C A 165 25.289 -13.237 79.886 1.00136.67 P
ATOM 3 OP1 C A 165 25.218 -12.827 78.459 1.00116.15 O
ATOM 4 OP2 C A 165 25.468 -12.183 80.922 1.00111.84 O
ATOM 5 O5' C A 165 24.032 -14.164 80.244 1.00108.91 O
ATOM 6 C5' C A 165 23.742 -15.323 79.468 1.00105.55 C
ATOM 7 C4' C A 165 22.627 -16.149 80.066 1.00104.64 C
ATOM 8 O4' C A 165 23.029 -16.688 81.346 1.00110.59 O
ATOM 9 C3' C A 165 21.331 -15.419 80.352 1.00 99.42 C
ATOM 10 O3' C A 165 20.531 -15.290 79.199 1.00104.49 O
ATOM 11 C2' C A 165 20.683 -16.272 81.435 1.00110.82 C
ATOM 12 O2' C A 165 19.949 -17.344 80.863 1.00107.34 O
ATOM 13 C1' C A 165 21.899 -16.847 82.172 1.00115.26 C
ATOM 14 N1 C A 165 22.152 -16.165 83.458 1.00126.81 N
ATOM 15 C2 C A 165 21.171 -16.166 84.464 1.00131.24 C
ATOM 16 O2 C A 165 20.076 -16.727 84.275 1.00131.17 O
ATOM 17 N3 C A 165 21.437 -15.538 85.630 1.00131.86 N
ATOM 18 C4 C A 165 22.616 -14.947 85.818 1.00131.78 C
ATOM 19 N4 C A 165 22.832 -14.348 86.988 1.00131.38 N
ATOM 20 C5 C A 165 23.629 -14.937 84.816 1.00131.10 C
ATOM 21 C6 C A 165 23.358 -15.557 83.664 1.00126.64 C
ATOM 22 P C A 166 19.523 -14.054 79.049 1.00125.81 P
ATOM 23 OP1 C A 166 19.278 -13.864 77.603 1.00160.28 O
ATOM 24 OP2 C A 166 20.096 -12.932 79.829 1.00165.28 O
ATOM 25 O5' C A 166 18.200 -14.587 79.755 1.00113.82 O
TER

ATOM 1 O3' G B 134 14.363 -14.832 95.899 1.00152.62 O
ATOM 2 P G B 135 15.639 -15.629 96.453 1.00178.42 P
ATOM 3 OP1 G B 135 15.139 -16.874 97.087 1.00185.43 O
ATOM 4 OP2 G B 135 16.429 -14.676 97.274 1.00181.26 O
ATOM 5 O5' G B 135 16.430 -15.979 95.118 1.00162.68 O
ATOM 6 C5' G B 135 16.540 -17.320 94.660 1.00160.09 C
ATOM 7 C4' G B 135 15.704 -17.561 93.422 1.00159.11 C
ATOM 8 O4' G B 135 15.743 -16.394 92.559 1.00166.53 O
ATOM 9 C3' G B 135 16.164 -18.697 92.524 1.00150.67 C
ATOM 10 O3' G B 135 15.750 -19.963 92.986 1.00151.51 O
ATOM 11 C2' G B 135 15.585 -18.311 91.173 1.00152.16 C
ATOM 12 O2' G B 135 14.190 -18.584 91.126 1.00144.42 O
ATOM 13 C1' G B 135 15.778 -16.796 91.203 1.00160.07 C
ATOM 14 N9 G B 135 17.081 -16.391 90.636 1.00170.31 N
ATOM 15 C8 G B 135 18.030 -15.602 91.252 1.00168.20 C
ATOM 16 N7 G B 135 19.092 -15.393 90.526 1.00165.66 N
ATOM 17 C5 G B 135 18.828 -16.087 89.353 1.00168.46 C
ATOM 18 C6 G B 135 19.616 -16.230 88.184 1.00165.23 C
ATOM 19 O6 G B 135 20.733 -15.751 87.969 1.00162.62 O
ATOM 20 N1 G B 135 18.986 -17.016 87.221 1.00163.47 N
ATOM 21 C2 G B 135 17.746 -17.594 87.365 1.00166.34 C
ATOM 22 N2 G B 135 17.304 -18.319 86.327 1.00163.66 N
ATOM 23 N3 G B 135 16.996 -17.469 88.450 1.00171.72 N
ATOM 24 C4 G B 135 17.594 -16.707 89.398 1.00171.33 C
ATOM 25 P G B 136 16.825 -20.960 93.635 1.00175.57 P
ATOM 26 OP1 G B 136 16.137 -21.707 94.721 1.00167.00 O
ATOM 27 OP2 G B 136 18.025 -20.150 93.973 1.00162.13 O
ATOM 28 O5' G B 136 17.153 -21.940 92.427 1.00153.49 O
TER

Atoms:
C2: (21.171,-16.166,84.464)
OP1: (25.218,-12.827,78.459)
OP2: (25.468,-12.183,80.922)
C4: (22.616,-14.947,85.818)
O5': (24.032,-14.164,80.244)
C3': (21.331,-15.419,80.352)
C1': (21.899,-16.847,82.172)
O4': (23.029,-16.688,81.346)
C5': (23.742,-15.323,79.468)
P: (25.289,-13.237,79.886)
O2: (20.076,-16.727,84.275)
C4': (22.627,-16.149,80.066)
C2': (20.683,-16.272,81.435)
O2': (19.949,-17.344,80.863)
N1: (22.152,-16.165,83.458)
N3: (21.437,-15.538,85.630)
N4: (22.832,-14.348,86.988)
C6: (23.358,-15.557,83.664)
C5: (23.629,-14.937,84.816)
O3': (20.531,-15.290,79.199)
OP1: (15.139,-16.874,97.087)
OP2: (16.429,-14.676,97.274)
C3': (16.164,-18.697,92.524)
C1': (15.778,-16.796,91.203)
C5': (16.540,-17.320,94.660)
O6: (20.733,-15.751,87.969)
O4': (15.743,-16.394,92.559)
C8: (18.030,-15.602,91.252)
C2: (17.746,-17.594,87.365)
C6: (19.616,-16.230,88.184)
C5: (18.828,-16.087,89.353)
C4: (17.594,-16.707,89.398)
P: (15.639,-15.629,96.453)
C4': (15.704,-17.561,93.422)
C2': (15.585,-18.311,91.173)
O2': (14.190,-18.584,91.126)
N1: (18.986,-17.016,87.221)
N2: (17.304,-18.319,86.327)
N3: (16.996,-17.469,88.450)
N7: (19.092,-15.393,90.526)
N9: (17.081,-16.391,90.636)
O5': (16.430,-15.979,95.118)
O3': (15.750,-19.963,92.986)
Image (generated by PyMOL):
PyMOL image
show in jmol