Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3K5Q:B2:B3
Extra
PDB:
ATOM 1 O3' G A 1 -1.808 -43.375 -2.781 1.00 36.21 O
ATOM 2 P U A 2 -2.596 -42.537 -1.665 1.00 39.08 P
ATOM 3 OP1 U A 2 -1.907 -41.224 -1.574 1.00 44.48 O
ATOM 4 OP2 U A 2 -2.762 -43.370 -0.443 1.00 38.11 O
ATOM 5 O5' U A 2 -4.020 -42.373 -2.332 1.00 38.85 O
ATOM 6 C5' U A 2 -5.041 -41.581 -1.725 1.00 36.55 C
ATOM 7 C4' U A 2 -5.457 -40.494 -2.713 1.00 41.20 C
ATOM 8 O4' U A 2 -5.845 -41.120 -3.961 1.00 35.03 O
ATOM 9 C3' U A 2 -6.656 -39.646 -2.318 1.00 31.72 C
ATOM 10 O3' U A 2 -6.221 -38.601 -1.486 1.00 39.75 O
ATOM 11 C2' U A 2 -7.105 -39.103 -3.670 1.00 30.83 C
ATOM 12 O2' U A 2 -6.281 -38.053 -4.173 1.00 38.59 O
ATOM 13 C1' U A 2 -6.859 -40.328 -4.566 1.00 32.35 C
ATOM 14 N1 U A 2 -8.063 -41.173 -4.817 1.00 31.75 N
ATOM 15 C2 U A 2 -8.959 -40.757 -5.783 1.00 33.29 C
ATOM 16 O2 U A 2 -8.809 -39.746 -6.467 1.00 35.98 O
ATOM 17 N3 U A 2 -10.024 -41.596 -5.885 1.00 35.44 N
ATOM 18 C4 U A 2 -10.330 -42.724 -5.169 1.00 27.66 C
ATOM 19 O4 U A 2 -11.380 -43.281 -5.383 1.00 26.70 O
ATOM 20 C5 U A 2 -9.321 -43.060 -4.193 1.00 28.59 C
ATOM 21 C6 U A 2 -8.253 -42.294 -4.050 1.00 29.00 C
ATOM 22 P A A 3 -7.059 -38.137 -0.215 1.00 47.80 P
ATOM 23 OP1 A A 3 -6.138 -37.387 0.673 1.00 55.17 O
ATOM 24 OP2 A A 3 -7.785 -39.318 0.310 1.00 53.30 O
ATOM 25 O5' A A 3 -8.124 -37.136 -0.846 1.00 45.70 O
TER
ATOM 1 O3' U B 2 -6.221 -38.601 -1.486 1.00 39.75 O
ATOM 2 P A B 3 -7.059 -38.137 -0.215 1.00 47.80 P
ATOM 3 OP1 A B 3 -6.138 -37.387 0.673 1.00 55.17 O
ATOM 4 OP2 A B 3 -7.785 -39.318 0.310 1.00 53.30 O
ATOM 5 O5' A B 3 -8.124 -37.136 -0.846 1.00 45.70 O
ATOM 6 C5' A B 3 -7.726 -35.959 -1.560 1.00 42.90 C
ATOM 7 C4' A B 3 -8.945 -35.175 -2.057 1.00 36.26 C
ATOM 8 O4' A B 3 -9.801 -36.046 -2.842 1.00 39.24 O
ATOM 9 C3' A B 3 -9.874 -34.630 -0.978 1.00 38.10 C
ATOM 10 O3' A B 3 -9.402 -33.377 -0.467 1.00 35.46 O
ATOM 11 C2' A B 3 -11.136 -34.423 -1.797 1.00 40.30 C
ATOM 12 O2' A B 3 -11.026 -33.291 -2.645 1.00 41.23 O
ATOM 13 C1' A B 3 -11.160 -35.682 -2.652 1.00 41.21 C
ATOM 14 N9 A B 3 -11.876 -36.777 -2.017 1.00 42.97 N
ATOM 15 C8 A B 3 -11.371 -37.671 -1.113 1.00 38.24 C
ATOM 16 N7 A B 3 -12.248 -38.558 -0.698 1.00 37.05 N
ATOM 17 C5 A B 3 -13.405 -38.231 -1.386 1.00 37.23 C
ATOM 18 C6 A B 3 -14.692 -38.799 -1.400 1.00 43.41 C
ATOM 19 N6 A B 3 -15.043 -39.863 -0.664 1.00 43.62 N
ATOM 20 N1 A B 3 -15.619 -38.231 -2.207 1.00 37.96 N
ATOM 21 C2 A B 3 -15.266 -37.174 -2.941 1.00 39.34 C
ATOM 22 N3 A B 3 -14.097 -36.549 -3.013 1.00 40.79 N
ATOM 23 C4 A B 3 -13.200 -37.131 -2.199 1.00 39.32 C
ATOM 24 P C B 4 -9.813 -32.884 1.003 1.00 44.20 P
ATOM 25 OP1 C B 4 -9.172 -31.566 1.200 1.00 54.61 O
ATOM 26 OP2 C B 4 -9.565 -33.989 1.962 1.00 42.20 O
ATOM 27 O5' C B 4 -11.387 -32.673 0.939 1.00 43.12 O
TER
ATOM 2 P U A 2 -2.596 -42.537 -1.665 1.00 39.08 P
ATOM 3 OP1 U A 2 -1.907 -41.224 -1.574 1.00 44.48 O
ATOM 4 OP2 U A 2 -2.762 -43.370 -0.443 1.00 38.11 O
ATOM 5 O5' U A 2 -4.020 -42.373 -2.332 1.00 38.85 O
ATOM 6 C5' U A 2 -5.041 -41.581 -1.725 1.00 36.55 C
ATOM 7 C4' U A 2 -5.457 -40.494 -2.713 1.00 41.20 C
ATOM 8 O4' U A 2 -5.845 -41.120 -3.961 1.00 35.03 O
ATOM 9 C3' U A 2 -6.656 -39.646 -2.318 1.00 31.72 C
ATOM 10 O3' U A 2 -6.221 -38.601 -1.486 1.00 39.75 O
ATOM 11 C2' U A 2 -7.105 -39.103 -3.670 1.00 30.83 C
ATOM 12 O2' U A 2 -6.281 -38.053 -4.173 1.00 38.59 O
ATOM 13 C1' U A 2 -6.859 -40.328 -4.566 1.00 32.35 C
ATOM 14 N1 U A 2 -8.063 -41.173 -4.817 1.00 31.75 N
ATOM 15 C2 U A 2 -8.959 -40.757 -5.783 1.00 33.29 C
ATOM 16 O2 U A 2 -8.809 -39.746 -6.467 1.00 35.98 O
ATOM 17 N3 U A 2 -10.024 -41.596 -5.885 1.00 35.44 N
ATOM 18 C4 U A 2 -10.330 -42.724 -5.169 1.00 27.66 C
ATOM 19 O4 U A 2 -11.380 -43.281 -5.383 1.00 26.70 O
ATOM 20 C5 U A 2 -9.321 -43.060 -4.193 1.00 28.59 C
ATOM 21 C6 U A 2 -8.253 -42.294 -4.050 1.00 29.00 C
ATOM 22 P A A 3 -7.059 -38.137 -0.215 1.00 47.80 P
ATOM 23 OP1 A A 3 -6.138 -37.387 0.673 1.00 55.17 O
ATOM 24 OP2 A A 3 -7.785 -39.318 0.310 1.00 53.30 O
ATOM 25 O5' A A 3 -8.124 -37.136 -0.846 1.00 45.70 O
TER
ATOM 1 O3' U B 2 -6.221 -38.601 -1.486 1.00 39.75 O
ATOM 2 P A B 3 -7.059 -38.137 -0.215 1.00 47.80 P
ATOM 3 OP1 A B 3 -6.138 -37.387 0.673 1.00 55.17 O
ATOM 4 OP2 A B 3 -7.785 -39.318 0.310 1.00 53.30 O
ATOM 5 O5' A B 3 -8.124 -37.136 -0.846 1.00 45.70 O
ATOM 6 C5' A B 3 -7.726 -35.959 -1.560 1.00 42.90 C
ATOM 7 C4' A B 3 -8.945 -35.175 -2.057 1.00 36.26 C
ATOM 8 O4' A B 3 -9.801 -36.046 -2.842 1.00 39.24 O
ATOM 9 C3' A B 3 -9.874 -34.630 -0.978 1.00 38.10 C
ATOM 10 O3' A B 3 -9.402 -33.377 -0.467 1.00 35.46 O
ATOM 11 C2' A B 3 -11.136 -34.423 -1.797 1.00 40.30 C
ATOM 12 O2' A B 3 -11.026 -33.291 -2.645 1.00 41.23 O
ATOM 13 C1' A B 3 -11.160 -35.682 -2.652 1.00 41.21 C
ATOM 14 N9 A B 3 -11.876 -36.777 -2.017 1.00 42.97 N
ATOM 15 C8 A B 3 -11.371 -37.671 -1.113 1.00 38.24 C
ATOM 16 N7 A B 3 -12.248 -38.558 -0.698 1.00 37.05 N
ATOM 17 C5 A B 3 -13.405 -38.231 -1.386 1.00 37.23 C
ATOM 18 C6 A B 3 -14.692 -38.799 -1.400 1.00 43.41 C
ATOM 19 N6 A B 3 -15.043 -39.863 -0.664 1.00 43.62 N
ATOM 20 N1 A B 3 -15.619 -38.231 -2.207 1.00 37.96 N
ATOM 21 C2 A B 3 -15.266 -37.174 -2.941 1.00 39.34 C
ATOM 22 N3 A B 3 -14.097 -36.549 -3.013 1.00 40.79 N
ATOM 23 C4 A B 3 -13.200 -37.131 -2.199 1.00 39.32 C
ATOM 24 P C B 4 -9.813 -32.884 1.003 1.00 44.20 P
ATOM 25 OP1 C B 4 -9.172 -31.566 1.200 1.00 54.61 O
ATOM 26 OP2 C B 4 -9.565 -33.989 1.962 1.00 42.20 O
ATOM 27 O5' C B 4 -11.387 -32.673 0.939 1.00 43.12 O
TER
Atoms:
C4: (-10.330,-42.724,-5.169)
N3: (-10.024,-41.596,-5.885)
OP1: (-1.907,-41.224,-1.574)
OP2: (-2.762,-43.370,-0.443)
C2: (-8.959,-40.757,-5.783)
C1': (-6.859,-40.328,-4.566)
C3': (-6.656,-39.646,-2.318)
O5': (-4.020,-42.373,-2.332)
O4': (-5.845,-41.120,-3.961)
C5': (-5.041,-41.581,-1.725)
P: (-2.596,-42.537,-1.665)
C4': (-5.457,-40.494,-2.713)
C2': (-7.105,-39.103,-3.670)
O2': (-6.281,-38.053,-4.173)
N1: (-8.063,-41.173,-4.817)
O4: (-11.380,-43.281,-5.383)
O2: (-8.809,-39.746,-6.467)
C6: (-8.253,-42.294,-4.050)
C5: (-9.321,-43.060,-4.193)
O3': (-6.221,-38.601,-1.486)
N3: (-10.024,-41.596,-5.885)
OP1: (-1.907,-41.224,-1.574)
OP2: (-2.762,-43.370,-0.443)
C2: (-8.959,-40.757,-5.783)
C1': (-6.859,-40.328,-4.566)
C3': (-6.656,-39.646,-2.318)
O5': (-4.020,-42.373,-2.332)
O4': (-5.845,-41.120,-3.961)
C5': (-5.041,-41.581,-1.725)
P: (-2.596,-42.537,-1.665)
C4': (-5.457,-40.494,-2.713)
C2': (-7.105,-39.103,-3.670)
O2': (-6.281,-38.053,-4.173)
N1: (-8.063,-41.173,-4.817)
O4: (-11.380,-43.281,-5.383)
O2: (-8.809,-39.746,-6.467)
C6: (-8.253,-42.294,-4.050)
C5: (-9.321,-43.060,-4.193)
O3': (-6.221,-38.601,-1.486)
OP1: (-6.138,-37.387,0.673)
OP2: (-7.785,-39.318,0.310)
C3': (-9.874,-34.630,-0.978)
C1': (-11.160,-35.682,-2.652)
C5': (-7.726,-35.959,-1.560)
O4': (-9.801,-36.046,-2.842)
C8: (-11.371,-37.671,-1.113)
O2': (-11.026,-33.291,-2.645)
C6: (-14.692,-38.799,-1.400)
C5: (-13.405,-38.231,-1.386)
C4: (-13.200,-37.131,-2.199)
P: (-7.059,-38.137,-0.215)
C4': (-8.945,-35.175,-2.057)
C2': (-11.136,-34.423,-1.797)
C2: (-15.266,-37.174,-2.941)
N1: (-15.619,-38.231,-2.207)
N3: (-14.097,-36.549,-3.013)
N6: (-15.043,-39.863,-0.664)
N7: (-12.248,-38.558,-0.698)
N9: (-11.876,-36.777,-2.017)
O5': (-8.124,-37.136,-0.846)
O3': (-9.402,-33.377,-0.467)
OP2: (-7.785,-39.318,0.310)
C3': (-9.874,-34.630,-0.978)
C1': (-11.160,-35.682,-2.652)
C5': (-7.726,-35.959,-1.560)
O4': (-9.801,-36.046,-2.842)
C8: (-11.371,-37.671,-1.113)
O2': (-11.026,-33.291,-2.645)
C6: (-14.692,-38.799,-1.400)
C5: (-13.405,-38.231,-1.386)
C4: (-13.200,-37.131,-2.199)
P: (-7.059,-38.137,-0.215)
C4': (-8.945,-35.175,-2.057)
C2': (-11.136,-34.423,-1.797)
C2: (-15.266,-37.174,-2.941)
N1: (-15.619,-38.231,-2.207)
N3: (-14.097,-36.549,-3.013)
N6: (-15.043,-39.863,-0.664)
N7: (-12.248,-38.558,-0.698)
N9: (-11.876,-36.777,-2.017)
O5': (-8.124,-37.136,-0.846)
O3': (-9.402,-33.377,-0.467)
Image (generated by PyMOL):