Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3K5Q:B0:B1
Extra
PDB:
ATOM 1 P U A 0 0.861 -52.359 2.400 1.00 57.95 P
ATOM 2 OP1 U A 0 -0.406 -53.122 2.338 1.00 57.39 O
ATOM 3 OP2 U A 0 2.081 -53.050 2.882 1.00 55.23 O
ATOM 4 O5' U A 0 1.205 -51.768 0.955 1.00 52.38 O
ATOM 5 C5' U A 0 2.223 -50.774 0.865 1.00 43.41 C
ATOM 6 C4' U A 0 2.266 -50.213 -0.543 1.00 38.23 C
ATOM 7 O4' U A 0 2.422 -51.315 -1.464 1.00 35.83 O
ATOM 8 C3' U A 0 0.993 -49.512 -0.985 1.00 31.32 C
ATOM 9 O3' U A 0 1.076 -48.129 -0.613 1.00 29.45 O
ATOM 10 C2' U A 0 1.045 -49.686 -2.494 1.00 33.90 C
ATOM 11 O2' U A 0 1.935 -48.734 -3.085 1.00 34.93 O
ATOM 12 C1' U A 0 1.615 -51.110 -2.610 1.00 32.86 C
ATOM 13 N1 U A 0 0.563 -52.154 -2.690 1.00 38.26 N
ATOM 14 C2 U A 0 -0.094 -52.269 -3.899 1.00 32.71 C
ATOM 15 O2 U A 0 0.162 -51.592 -4.887 1.00 26.16 O
ATOM 16 N3 U A 0 -1.074 -53.218 -3.904 1.00 32.08 N
ATOM 17 C4 U A 0 -1.464 -54.035 -2.876 1.00 38.39 C
ATOM 18 O4 U A 0 -2.388 -54.797 -3.105 1.00 36.00 O
ATOM 19 C5 U A 0 -0.722 -53.870 -1.642 1.00 33.38 C
ATOM 20 C6 U A 0 0.256 -52.947 -1.591 1.00 36.13 C
ATOM 21 P G A 1 -0.251 -47.344 -0.224 1.00 35.64 P
ATOM 22 OP1 G A 1 0.175 -46.118 0.542 1.00 36.19 O
ATOM 23 OP2 G A 1 -1.220 -48.273 0.379 1.00 36.51 O
ATOM 24 O5' G A 1 -0.807 -46.912 -1.625 1.00 36.88 O
TER
ATOM 1 O3' U B 0 1.076 -48.129 -0.613 1.00 29.45 O
ATOM 2 P G B 1 -0.251 -47.344 -0.224 1.00 35.64 P
ATOM 3 OP1 G B 1 0.175 -46.118 0.542 1.00 36.19 O
ATOM 4 OP2 G B 1 -1.220 -48.273 0.379 1.00 36.51 O
ATOM 5 O5' G B 1 -0.807 -46.912 -1.625 1.00 36.88 O
ATOM 6 C5' G B 1 -0.071 -46.023 -2.461 1.00 40.35 C
ATOM 7 C4' G B 1 -0.962 -45.481 -3.568 1.00 31.42 C
ATOM 8 O4' G B 1 -1.549 -46.600 -4.288 1.00 37.38 O
ATOM 9 C3' G B 1 -2.175 -44.710 -3.079 1.00 38.33 C
ATOM 10 O3' G B 1 -1.808 -43.375 -2.781 1.00 36.21 O
ATOM 11 C2' G B 1 -3.070 -44.788 -4.314 1.00 35.91 C
ATOM 12 O2' G B 1 -2.669 -43.901 -5.344 1.00 33.25 O
ATOM 13 C1' G B 1 -2.835 -46.217 -4.774 1.00 31.89 C
ATOM 14 N9 G B 1 -3.834 -47.144 -4.252 1.00 35.98 N
ATOM 15 C8 G B 1 -3.866 -47.684 -2.993 1.00 32.69 C
ATOM 16 N7 G B 1 -4.897 -48.481 -2.808 1.00 33.09 N
ATOM 17 C5 G B 1 -5.592 -48.468 -4.017 1.00 30.57 C
ATOM 18 C6 G B 1 -6.771 -49.154 -4.459 1.00 32.16 C
ATOM 19 O6 G B 1 -7.516 -49.927 -3.849 1.00 25.60 O
ATOM 20 N1 G B 1 -7.089 -48.851 -5.778 1.00 24.63 N
ATOM 21 C2 G B 1 -6.375 -48.022 -6.602 1.00 30.66 C
ATOM 22 N2 G B 1 -6.859 -47.862 -7.840 1.00 26.27 N
ATOM 23 N3 G B 1 -5.286 -47.379 -6.220 1.00 28.91 N
ATOM 24 C4 G B 1 -4.940 -47.647 -4.925 1.00 31.52 C
ATOM 25 P U B 2 -2.596 -42.537 -1.665 1.00 39.08 P
ATOM 26 OP1 U B 2 -1.907 -41.224 -1.574 1.00 44.48 O
ATOM 27 OP2 U B 2 -2.762 -43.370 -0.443 1.00 38.11 O
ATOM 28 O5' U B 2 -4.020 -42.373 -2.332 1.00 38.85 O
TER
ATOM 2 OP1 U A 0 -0.406 -53.122 2.338 1.00 57.39 O
ATOM 3 OP2 U A 0 2.081 -53.050 2.882 1.00 55.23 O
ATOM 4 O5' U A 0 1.205 -51.768 0.955 1.00 52.38 O
ATOM 5 C5' U A 0 2.223 -50.774 0.865 1.00 43.41 C
ATOM 6 C4' U A 0 2.266 -50.213 -0.543 1.00 38.23 C
ATOM 7 O4' U A 0 2.422 -51.315 -1.464 1.00 35.83 O
ATOM 8 C3' U A 0 0.993 -49.512 -0.985 1.00 31.32 C
ATOM 9 O3' U A 0 1.076 -48.129 -0.613 1.00 29.45 O
ATOM 10 C2' U A 0 1.045 -49.686 -2.494 1.00 33.90 C
ATOM 11 O2' U A 0 1.935 -48.734 -3.085 1.00 34.93 O
ATOM 12 C1' U A 0 1.615 -51.110 -2.610 1.00 32.86 C
ATOM 13 N1 U A 0 0.563 -52.154 -2.690 1.00 38.26 N
ATOM 14 C2 U A 0 -0.094 -52.269 -3.899 1.00 32.71 C
ATOM 15 O2 U A 0 0.162 -51.592 -4.887 1.00 26.16 O
ATOM 16 N3 U A 0 -1.074 -53.218 -3.904 1.00 32.08 N
ATOM 17 C4 U A 0 -1.464 -54.035 -2.876 1.00 38.39 C
ATOM 18 O4 U A 0 -2.388 -54.797 -3.105 1.00 36.00 O
ATOM 19 C5 U A 0 -0.722 -53.870 -1.642 1.00 33.38 C
ATOM 20 C6 U A 0 0.256 -52.947 -1.591 1.00 36.13 C
ATOM 21 P G A 1 -0.251 -47.344 -0.224 1.00 35.64 P
ATOM 22 OP1 G A 1 0.175 -46.118 0.542 1.00 36.19 O
ATOM 23 OP2 G A 1 -1.220 -48.273 0.379 1.00 36.51 O
ATOM 24 O5' G A 1 -0.807 -46.912 -1.625 1.00 36.88 O
TER
ATOM 1 O3' U B 0 1.076 -48.129 -0.613 1.00 29.45 O
ATOM 2 P G B 1 -0.251 -47.344 -0.224 1.00 35.64 P
ATOM 3 OP1 G B 1 0.175 -46.118 0.542 1.00 36.19 O
ATOM 4 OP2 G B 1 -1.220 -48.273 0.379 1.00 36.51 O
ATOM 5 O5' G B 1 -0.807 -46.912 -1.625 1.00 36.88 O
ATOM 6 C5' G B 1 -0.071 -46.023 -2.461 1.00 40.35 C
ATOM 7 C4' G B 1 -0.962 -45.481 -3.568 1.00 31.42 C
ATOM 8 O4' G B 1 -1.549 -46.600 -4.288 1.00 37.38 O
ATOM 9 C3' G B 1 -2.175 -44.710 -3.079 1.00 38.33 C
ATOM 10 O3' G B 1 -1.808 -43.375 -2.781 1.00 36.21 O
ATOM 11 C2' G B 1 -3.070 -44.788 -4.314 1.00 35.91 C
ATOM 12 O2' G B 1 -2.669 -43.901 -5.344 1.00 33.25 O
ATOM 13 C1' G B 1 -2.835 -46.217 -4.774 1.00 31.89 C
ATOM 14 N9 G B 1 -3.834 -47.144 -4.252 1.00 35.98 N
ATOM 15 C8 G B 1 -3.866 -47.684 -2.993 1.00 32.69 C
ATOM 16 N7 G B 1 -4.897 -48.481 -2.808 1.00 33.09 N
ATOM 17 C5 G B 1 -5.592 -48.468 -4.017 1.00 30.57 C
ATOM 18 C6 G B 1 -6.771 -49.154 -4.459 1.00 32.16 C
ATOM 19 O6 G B 1 -7.516 -49.927 -3.849 1.00 25.60 O
ATOM 20 N1 G B 1 -7.089 -48.851 -5.778 1.00 24.63 N
ATOM 21 C2 G B 1 -6.375 -48.022 -6.602 1.00 30.66 C
ATOM 22 N2 G B 1 -6.859 -47.862 -7.840 1.00 26.27 N
ATOM 23 N3 G B 1 -5.286 -47.379 -6.220 1.00 28.91 N
ATOM 24 C4 G B 1 -4.940 -47.647 -4.925 1.00 31.52 C
ATOM 25 P U B 2 -2.596 -42.537 -1.665 1.00 39.08 P
ATOM 26 OP1 U B 2 -1.907 -41.224 -1.574 1.00 44.48 O
ATOM 27 OP2 U B 2 -2.762 -43.370 -0.443 1.00 38.11 O
ATOM 28 O5' U B 2 -4.020 -42.373 -2.332 1.00 38.85 O
TER
Atoms:
C4: (-1.464,-54.035,-2.876)
N3: (-1.074,-53.218,-3.904)
OP1: (-0.406,-53.122,2.338)
OP2: (2.081,-53.050,2.882)
C2: (-0.094,-52.269,-3.899)
C1': (1.615,-51.110,-2.610)
C3': (0.993,-49.512,-0.985)
O5': (1.205,-51.768,0.955)
O4': (2.422,-51.315,-1.464)
C5': (2.223,-50.774,0.865)
P: (0.861,-52.359,2.400)
C4': (2.266,-50.213,-0.543)
C2': (1.045,-49.686,-2.494)
O2': (1.935,-48.734,-3.085)
N1: (0.563,-52.154,-2.690)
O4: (-2.388,-54.797,-3.105)
O2: (0.162,-51.592,-4.887)
C6: (0.256,-52.947,-1.591)
C5: (-0.722,-53.870,-1.642)
O3': (1.076,-48.129,-0.613)
N3: (-1.074,-53.218,-3.904)
OP1: (-0.406,-53.122,2.338)
OP2: (2.081,-53.050,2.882)
C2: (-0.094,-52.269,-3.899)
C1': (1.615,-51.110,-2.610)
C3': (0.993,-49.512,-0.985)
O5': (1.205,-51.768,0.955)
O4': (2.422,-51.315,-1.464)
C5': (2.223,-50.774,0.865)
P: (0.861,-52.359,2.400)
C4': (2.266,-50.213,-0.543)
C2': (1.045,-49.686,-2.494)
O2': (1.935,-48.734,-3.085)
N1: (0.563,-52.154,-2.690)
O4: (-2.388,-54.797,-3.105)
O2: (0.162,-51.592,-4.887)
C6: (0.256,-52.947,-1.591)
C5: (-0.722,-53.870,-1.642)
O3': (1.076,-48.129,-0.613)
OP1: (0.175,-46.118,0.542)
OP2: (-1.220,-48.273,0.379)
C3': (-2.175,-44.710,-3.079)
C1': (-2.835,-46.217,-4.774)
C5': (-0.071,-46.023,-2.461)
O6: (-7.516,-49.927,-3.849)
O4': (-1.549,-46.600,-4.288)
C8: (-3.866,-47.684,-2.993)
C2: (-6.375,-48.022,-6.602)
C6: (-6.771,-49.154,-4.459)
C5: (-5.592,-48.468,-4.017)
C4: (-4.940,-47.647,-4.925)
P: (-0.251,-47.344,-0.224)
C4': (-0.962,-45.481,-3.568)
C2': (-3.070,-44.788,-4.314)
O2': (-2.669,-43.901,-5.344)
N1: (-7.089,-48.851,-5.778)
N2: (-6.859,-47.862,-7.840)
N3: (-5.286,-47.379,-6.220)
N7: (-4.897,-48.481,-2.808)
N9: (-3.834,-47.144,-4.252)
O5': (-0.807,-46.912,-1.625)
O3': (-1.808,-43.375,-2.781)
OP2: (-1.220,-48.273,0.379)
C3': (-2.175,-44.710,-3.079)
C1': (-2.835,-46.217,-4.774)
C5': (-0.071,-46.023,-2.461)
O6: (-7.516,-49.927,-3.849)
O4': (-1.549,-46.600,-4.288)
C8: (-3.866,-47.684,-2.993)
C2: (-6.375,-48.022,-6.602)
C6: (-6.771,-49.154,-4.459)
C5: (-5.592,-48.468,-4.017)
C4: (-4.940,-47.647,-4.925)
P: (-0.251,-47.344,-0.224)
C4': (-0.962,-45.481,-3.568)
C2': (-3.070,-44.788,-4.314)
O2': (-2.669,-43.901,-5.344)
N1: (-7.089,-48.851,-5.778)
N2: (-6.859,-47.862,-7.840)
N3: (-5.286,-47.379,-6.220)
N7: (-4.897,-48.481,-2.808)
N9: (-3.834,-47.144,-4.252)
O5': (-0.807,-46.912,-1.625)
O3': (-1.808,-43.375,-2.781)
Image (generated by PyMOL):