Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3K5Y:B7:B8
Extra
PDB:
ATOM 1 O3' A A 6 -13.137 -24.387 5.466 1.00 55.72 O
ATOM 2 P U A 7 -13.441 -24.285 7.027 1.00 70.37 P
ATOM 3 OP1 U A 7 -12.330 -23.534 7.667 1.00 76.61 O
ATOM 4 OP2 U A 7 -13.781 -25.647 7.509 1.00 65.65 O
ATOM 5 O5' U A 7 -14.764 -23.410 7.091 1.00 58.07 O
ATOM 6 C5' U A 7 -15.294 -23.063 8.366 1.00 58.57 C
ATOM 7 C4' U A 7 -15.229 -21.557 8.532 1.00 64.31 C
ATOM 8 O4' U A 7 -16.185 -20.937 7.639 1.00 65.91 O
ATOM 9 C3' U A 7 -15.600 -21.038 9.911 1.00 67.79 C
ATOM 10 O3' U A 7 -14.453 -21.086 10.754 1.00 79.35 O
ATOM 11 C2' U A 7 -16.000 -19.601 9.596 1.00 67.62 C
ATOM 12 O2' U A 7 -14.886 -18.730 9.511 1.00 72.74 O
ATOM 13 C1' U A 7 -16.650 -19.733 8.218 1.00 64.94 C
ATOM 14 N1 U A 7 -18.147 -19.735 8.239 1.00 67.45 N
ATOM 15 C2 U A 7 -18.804 -18.526 8.208 1.00 70.33 C
ATOM 16 O2 U A 7 -18.196 -17.470 8.167 1.00 68.39 O
ATOM 17 N3 U A 7 -20.181 -18.603 8.227 1.00 68.71 N
ATOM 18 C4 U A 7 -20.945 -19.760 8.274 1.00 67.92 C
ATOM 19 O4 U A 7 -22.170 -19.690 8.279 1.00 55.87 O
ATOM 20 C5 U A 7 -20.181 -20.985 8.307 1.00 66.08 C
ATOM 21 C6 U A 7 -18.841 -20.929 8.287 1.00 65.53 C
ATOM 22 P A A 8 -14.598 -21.507 12.291 1.00103.84 P
ATOM 23 OP1 A A 8 -13.285 -22.007 12.750 1.00109.00 O
ATOM 24 OP2 A A 8 -15.808 -22.350 12.431 1.00 99.89 O
ATOM 25 O5' A A 8 -14.875 -20.105 13.007 1.00137.83 O
TER
ATOM 1 O3' U B 7 -14.453 -21.086 10.754 1.00 79.35 O
ATOM 2 P A B 8 -14.598 -21.507 12.291 1.00103.84 P
ATOM 3 OP1 A B 8 -13.285 -22.007 12.750 1.00109.00 O
ATOM 4 OP2 A B 8 -15.808 -22.350 12.431 1.00 99.89 O
ATOM 5 O5' A B 8 -14.875 -20.105 13.007 1.00137.83 O
ATOM 6 C5' A B 8 -13.882 -19.087 12.990 1.00134.67 C
ATOM 7 C4' A B 8 -14.185 -18.093 14.088 1.00133.36 C
ATOM 8 O4' A B 8 -15.477 -17.499 13.812 1.00133.21 O
ATOM 9 C3' A B 8 -14.317 -18.720 15.469 1.00136.00 C
ATOM 10 O3' A B 8 -13.061 -18.719 16.134 1.00137.17 O
ATOM 11 C2' A B 8 -15.307 -17.793 16.161 1.00140.23 C
ATOM 12 O2' A B 8 -14.664 -16.662 16.711 1.00145.25 O
ATOM 13 C1' A B 8 -16.220 -17.369 15.012 1.00137.84 C
ATOM 14 N9 A B 8 -17.441 -18.166 14.912 1.00134.75 N
ATOM 15 C8 A B 8 -17.554 -19.454 14.463 1.00132.93 C
ATOM 16 N7 A B 8 -18.782 -19.918 14.486 1.00130.28 N
ATOM 17 C5 A B 8 -19.529 -18.861 14.986 1.00131.20 C
ATOM 18 C6 A B 8 -20.907 -18.711 15.255 1.00130.68 C
ATOM 19 N6 A B 8 -21.812 -19.674 15.047 1.00131.59 N
ATOM 20 N1 A B 8 -21.324 -17.527 15.748 1.00127.58 N
ATOM 21 C2 A B 8 -20.417 -16.570 15.955 1.00127.26 C
ATOM 22 N3 A B 8 -19.103 -16.585 15.744 1.00129.35 N
ATOM 23 C4 A B 8 -18.717 -17.774 15.254 1.00131.47 C
TER
ATOM 2 P U A 7 -13.441 -24.285 7.027 1.00 70.37 P
ATOM 3 OP1 U A 7 -12.330 -23.534 7.667 1.00 76.61 O
ATOM 4 OP2 U A 7 -13.781 -25.647 7.509 1.00 65.65 O
ATOM 5 O5' U A 7 -14.764 -23.410 7.091 1.00 58.07 O
ATOM 6 C5' U A 7 -15.294 -23.063 8.366 1.00 58.57 C
ATOM 7 C4' U A 7 -15.229 -21.557 8.532 1.00 64.31 C
ATOM 8 O4' U A 7 -16.185 -20.937 7.639 1.00 65.91 O
ATOM 9 C3' U A 7 -15.600 -21.038 9.911 1.00 67.79 C
ATOM 10 O3' U A 7 -14.453 -21.086 10.754 1.00 79.35 O
ATOM 11 C2' U A 7 -16.000 -19.601 9.596 1.00 67.62 C
ATOM 12 O2' U A 7 -14.886 -18.730 9.511 1.00 72.74 O
ATOM 13 C1' U A 7 -16.650 -19.733 8.218 1.00 64.94 C
ATOM 14 N1 U A 7 -18.147 -19.735 8.239 1.00 67.45 N
ATOM 15 C2 U A 7 -18.804 -18.526 8.208 1.00 70.33 C
ATOM 16 O2 U A 7 -18.196 -17.470 8.167 1.00 68.39 O
ATOM 17 N3 U A 7 -20.181 -18.603 8.227 1.00 68.71 N
ATOM 18 C4 U A 7 -20.945 -19.760 8.274 1.00 67.92 C
ATOM 19 O4 U A 7 -22.170 -19.690 8.279 1.00 55.87 O
ATOM 20 C5 U A 7 -20.181 -20.985 8.307 1.00 66.08 C
ATOM 21 C6 U A 7 -18.841 -20.929 8.287 1.00 65.53 C
ATOM 22 P A A 8 -14.598 -21.507 12.291 1.00103.84 P
ATOM 23 OP1 A A 8 -13.285 -22.007 12.750 1.00109.00 O
ATOM 24 OP2 A A 8 -15.808 -22.350 12.431 1.00 99.89 O
ATOM 25 O5' A A 8 -14.875 -20.105 13.007 1.00137.83 O
TER
ATOM 1 O3' U B 7 -14.453 -21.086 10.754 1.00 79.35 O
ATOM 2 P A B 8 -14.598 -21.507 12.291 1.00103.84 P
ATOM 3 OP1 A B 8 -13.285 -22.007 12.750 1.00109.00 O
ATOM 4 OP2 A B 8 -15.808 -22.350 12.431 1.00 99.89 O
ATOM 5 O5' A B 8 -14.875 -20.105 13.007 1.00137.83 O
ATOM 6 C5' A B 8 -13.882 -19.087 12.990 1.00134.67 C
ATOM 7 C4' A B 8 -14.185 -18.093 14.088 1.00133.36 C
ATOM 8 O4' A B 8 -15.477 -17.499 13.812 1.00133.21 O
ATOM 9 C3' A B 8 -14.317 -18.720 15.469 1.00136.00 C
ATOM 10 O3' A B 8 -13.061 -18.719 16.134 1.00137.17 O
ATOM 11 C2' A B 8 -15.307 -17.793 16.161 1.00140.23 C
ATOM 12 O2' A B 8 -14.664 -16.662 16.711 1.00145.25 O
ATOM 13 C1' A B 8 -16.220 -17.369 15.012 1.00137.84 C
ATOM 14 N9 A B 8 -17.441 -18.166 14.912 1.00134.75 N
ATOM 15 C8 A B 8 -17.554 -19.454 14.463 1.00132.93 C
ATOM 16 N7 A B 8 -18.782 -19.918 14.486 1.00130.28 N
ATOM 17 C5 A B 8 -19.529 -18.861 14.986 1.00131.20 C
ATOM 18 C6 A B 8 -20.907 -18.711 15.255 1.00130.68 C
ATOM 19 N6 A B 8 -21.812 -19.674 15.047 1.00131.59 N
ATOM 20 N1 A B 8 -21.324 -17.527 15.748 1.00127.58 N
ATOM 21 C2 A B 8 -20.417 -16.570 15.955 1.00127.26 C
ATOM 22 N3 A B 8 -19.103 -16.585 15.744 1.00129.35 N
ATOM 23 C4 A B 8 -18.717 -17.774 15.254 1.00131.47 C
TER
Atoms:
C4: (-20.945,-19.760,8.274)
N3: (-20.181,-18.603,8.227)
OP1: (-12.330,-23.534,7.667)
OP2: (-13.781,-25.647,7.509)
C2: (-18.804,-18.526,8.208)
C1': (-16.650,-19.733,8.218)
C3': (-15.600,-21.038,9.911)
O5': (-14.764,-23.410,7.091)
O4': (-16.185,-20.937,7.639)
C5': (-15.294,-23.063,8.366)
P: (-13.441,-24.285,7.027)
C4': (-15.229,-21.557,8.532)
C2': (-16.000,-19.601,9.596)
O2': (-14.886,-18.730,9.511)
N1: (-18.147,-19.735,8.239)
O4: (-22.170,-19.690,8.279)
O2: (-18.196,-17.470,8.167)
C6: (-18.841,-20.929,8.287)
C5: (-20.181,-20.985,8.307)
O3': (-14.453,-21.086,10.754)
N3: (-20.181,-18.603,8.227)
OP1: (-12.330,-23.534,7.667)
OP2: (-13.781,-25.647,7.509)
C2: (-18.804,-18.526,8.208)
C1': (-16.650,-19.733,8.218)
C3': (-15.600,-21.038,9.911)
O5': (-14.764,-23.410,7.091)
O4': (-16.185,-20.937,7.639)
C5': (-15.294,-23.063,8.366)
P: (-13.441,-24.285,7.027)
C4': (-15.229,-21.557,8.532)
C2': (-16.000,-19.601,9.596)
O2': (-14.886,-18.730,9.511)
N1: (-18.147,-19.735,8.239)
O4: (-22.170,-19.690,8.279)
O2: (-18.196,-17.470,8.167)
C6: (-18.841,-20.929,8.287)
C5: (-20.181,-20.985,8.307)
O3': (-14.453,-21.086,10.754)
OP1: (-13.285,-22.007,12.750)
OP2: (-15.808,-22.350,12.431)
C3': (-14.317,-18.720,15.469)
C1': (-16.220,-17.369,15.012)
C5': (-13.882,-19.087,12.990)
O4': (-15.477,-17.499,13.812)
C8: (-17.554,-19.454,14.463)
O2': (-14.664,-16.662,16.711)
C6: (-20.907,-18.711,15.255)
C5: (-19.529,-18.861,14.986)
C4: (-18.717,-17.774,15.254)
P: (-14.598,-21.507,12.291)
C4': (-14.185,-18.093,14.088)
C2': (-15.307,-17.793,16.161)
C2: (-20.417,-16.570,15.955)
N1: (-21.324,-17.527,15.748)
N3: (-19.103,-16.585,15.744)
N6: (-21.812,-19.674,15.047)
N7: (-18.782,-19.918,14.486)
N9: (-17.441,-18.166,14.912)
O5': (-14.875,-20.105,13.007)
O3': (-13.061,-18.719,16.134)
OP2: (-15.808,-22.350,12.431)
C3': (-14.317,-18.720,15.469)
C1': (-16.220,-17.369,15.012)
C5': (-13.882,-19.087,12.990)
O4': (-15.477,-17.499,13.812)
C8: (-17.554,-19.454,14.463)
O2': (-14.664,-16.662,16.711)
C6: (-20.907,-18.711,15.255)
C5: (-19.529,-18.861,14.986)
C4: (-18.717,-17.774,15.254)
P: (-14.598,-21.507,12.291)
C4': (-14.185,-18.093,14.088)
C2': (-15.307,-17.793,16.161)
C2: (-20.417,-16.570,15.955)
N1: (-21.324,-17.527,15.748)
N3: (-19.103,-16.585,15.744)
N6: (-21.812,-19.674,15.047)
N7: (-18.782,-19.918,14.486)
N9: (-17.441,-18.166,14.912)
O5': (-14.875,-20.105,13.007)
O3': (-13.061,-18.719,16.134)
Image (generated by PyMOL):