Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3K61:B2:B3
Extra
PDB:
ATOM 1 O3' G A 1 0.511 42.864 -5.097 1.00 43.93 O
ATOM 2 P U A 2 1.181 41.958 -3.978 1.00 47.06 P
ATOM 3 OP1 U A 2 0.391 40.719 -3.863 1.00 58.31 O
ATOM 4 OP2 U A 2 1.469 42.758 -2.768 1.00 46.17 O
ATOM 5 O5' U A 2 2.564 41.609 -4.707 1.00 47.69 O
ATOM 6 C5' U A 2 3.558 40.865 -4.020 1.00 42.06 C
ATOM 7 C4' U A 2 4.035 39.804 -4.986 1.00 43.69 C
ATOM 8 O4' U A 2 4.558 40.461 -6.149 1.00 41.21 O
ATOM 9 C3' U A 2 5.190 38.963 -4.526 1.00 45.14 C
ATOM 10 O3' U A 2 4.648 37.911 -3.768 1.00 46.95 O
ATOM 11 C2' U A 2 5.721 38.477 -5.872 1.00 46.60 C
ATOM 12 O2' U A 2 4.930 37.442 -6.427 1.00 41.57 O
ATOM 13 C1' U A 2 5.569 39.708 -6.751 1.00 45.12 C
ATOM 14 N1 U A 2 6.798 40.560 -6.889 1.00 47.51 N
ATOM 15 C2 U A 2 7.666 40.195 -7.896 1.00 45.48 C
ATOM 16 O2 U A 2 7.425 39.243 -8.624 1.00 43.31 O
ATOM 17 N3 U A 2 8.783 40.986 -8.021 1.00 42.21 N
ATOM 18 C4 U A 2 9.092 42.069 -7.228 1.00 43.17 C
ATOM 19 O4 U A 2 10.123 42.694 -7.444 1.00 36.16 O
ATOM 20 C5 U A 2 8.137 42.382 -6.189 1.00 43.37 C
ATOM 21 C6 U A 2 7.039 41.640 -6.057 1.00 39.46 C
ATOM 22 P A A 3 5.461 37.420 -2.477 1.00 55.66 P
ATOM 23 OP1 A A 3 4.505 36.651 -1.656 1.00 53.43 O
ATOM 24 OP2 A A 3 6.198 38.584 -1.916 1.00 54.59 O
ATOM 25 O5' A A 3 6.606 36.450 -3.049 1.00 48.57 O
TER
ATOM 1 O3' U B 2 4.648 37.911 -3.768 1.00 46.95 O
ATOM 2 P A B 3 5.461 37.420 -2.477 1.00 55.66 P
ATOM 3 OP1 A B 3 4.505 36.651 -1.656 1.00 53.43 O
ATOM 4 OP2 A B 3 6.198 38.584 -1.916 1.00 54.59 O
ATOM 5 O5' A B 3 6.606 36.450 -3.049 1.00 48.57 O
ATOM 6 C5' A B 3 6.333 35.186 -3.623 1.00 51.61 C
ATOM 7 C4' A B 3 7.601 34.535 -4.160 1.00 46.63 C
ATOM 8 O4' A B 3 8.404 35.505 -4.883 1.00 52.65 O
ATOM 9 C3' A B 3 8.580 33.999 -3.130 1.00 46.83 C
ATOM 10 O3' A B 3 8.172 32.731 -2.652 1.00 42.15 O
ATOM 11 C2' A B 3 9.824 33.843 -3.989 1.00 47.63 C
ATOM 12 O2' A B 3 9.731 32.739 -4.851 1.00 44.11 O
ATOM 13 C1' A B 3 9.771 35.123 -4.807 1.00 52.41 C
ATOM 14 N9 A B 3 10.566 36.171 -4.178 1.00 52.53 N
ATOM 15 C8 A B 3 10.139 37.058 -3.234 1.00 48.65 C
ATOM 16 N7 A B 3 11.073 37.880 -2.834 1.00 46.66 N
ATOM 17 C5 A B 3 12.185 37.511 -3.563 1.00 47.78 C
ATOM 18 C6 A B 3 13.502 38.005 -3.595 1.00 47.55 C
ATOM 19 N6 A B 3 13.897 39.039 -2.843 1.00 44.91 N
ATOM 20 N1 A B 3 14.381 37.402 -4.433 1.00 49.01 N
ATOM 21 C2 A B 3 13.972 36.372 -5.189 1.00 41.20 C
ATOM 22 N3 A B 3 12.759 35.827 -5.235 1.00 51.14 N
ATOM 23 C4 A B 3 11.901 36.446 -4.392 1.00 52.62 C
ATOM 24 P A B 4 8.517 32.274 -1.156 1.00 48.09 P
ATOM 25 OP1 A B 4 7.834 30.963 -0.974 1.00 44.90 O
ATOM 26 OP2 A B 4 8.230 33.407 -0.226 1.00 51.88 O
ATOM 27 O5' A B 4 10.079 32.073 -1.089 1.00 47.92 O
TER
ATOM 2 P U A 2 1.181 41.958 -3.978 1.00 47.06 P
ATOM 3 OP1 U A 2 0.391 40.719 -3.863 1.00 58.31 O
ATOM 4 OP2 U A 2 1.469 42.758 -2.768 1.00 46.17 O
ATOM 5 O5' U A 2 2.564 41.609 -4.707 1.00 47.69 O
ATOM 6 C5' U A 2 3.558 40.865 -4.020 1.00 42.06 C
ATOM 7 C4' U A 2 4.035 39.804 -4.986 1.00 43.69 C
ATOM 8 O4' U A 2 4.558 40.461 -6.149 1.00 41.21 O
ATOM 9 C3' U A 2 5.190 38.963 -4.526 1.00 45.14 C
ATOM 10 O3' U A 2 4.648 37.911 -3.768 1.00 46.95 O
ATOM 11 C2' U A 2 5.721 38.477 -5.872 1.00 46.60 C
ATOM 12 O2' U A 2 4.930 37.442 -6.427 1.00 41.57 O
ATOM 13 C1' U A 2 5.569 39.708 -6.751 1.00 45.12 C
ATOM 14 N1 U A 2 6.798 40.560 -6.889 1.00 47.51 N
ATOM 15 C2 U A 2 7.666 40.195 -7.896 1.00 45.48 C
ATOM 16 O2 U A 2 7.425 39.243 -8.624 1.00 43.31 O
ATOM 17 N3 U A 2 8.783 40.986 -8.021 1.00 42.21 N
ATOM 18 C4 U A 2 9.092 42.069 -7.228 1.00 43.17 C
ATOM 19 O4 U A 2 10.123 42.694 -7.444 1.00 36.16 O
ATOM 20 C5 U A 2 8.137 42.382 -6.189 1.00 43.37 C
ATOM 21 C6 U A 2 7.039 41.640 -6.057 1.00 39.46 C
ATOM 22 P A A 3 5.461 37.420 -2.477 1.00 55.66 P
ATOM 23 OP1 A A 3 4.505 36.651 -1.656 1.00 53.43 O
ATOM 24 OP2 A A 3 6.198 38.584 -1.916 1.00 54.59 O
ATOM 25 O5' A A 3 6.606 36.450 -3.049 1.00 48.57 O
TER
ATOM 1 O3' U B 2 4.648 37.911 -3.768 1.00 46.95 O
ATOM 2 P A B 3 5.461 37.420 -2.477 1.00 55.66 P
ATOM 3 OP1 A B 3 4.505 36.651 -1.656 1.00 53.43 O
ATOM 4 OP2 A B 3 6.198 38.584 -1.916 1.00 54.59 O
ATOM 5 O5' A B 3 6.606 36.450 -3.049 1.00 48.57 O
ATOM 6 C5' A B 3 6.333 35.186 -3.623 1.00 51.61 C
ATOM 7 C4' A B 3 7.601 34.535 -4.160 1.00 46.63 C
ATOM 8 O4' A B 3 8.404 35.505 -4.883 1.00 52.65 O
ATOM 9 C3' A B 3 8.580 33.999 -3.130 1.00 46.83 C
ATOM 10 O3' A B 3 8.172 32.731 -2.652 1.00 42.15 O
ATOM 11 C2' A B 3 9.824 33.843 -3.989 1.00 47.63 C
ATOM 12 O2' A B 3 9.731 32.739 -4.851 1.00 44.11 O
ATOM 13 C1' A B 3 9.771 35.123 -4.807 1.00 52.41 C
ATOM 14 N9 A B 3 10.566 36.171 -4.178 1.00 52.53 N
ATOM 15 C8 A B 3 10.139 37.058 -3.234 1.00 48.65 C
ATOM 16 N7 A B 3 11.073 37.880 -2.834 1.00 46.66 N
ATOM 17 C5 A B 3 12.185 37.511 -3.563 1.00 47.78 C
ATOM 18 C6 A B 3 13.502 38.005 -3.595 1.00 47.55 C
ATOM 19 N6 A B 3 13.897 39.039 -2.843 1.00 44.91 N
ATOM 20 N1 A B 3 14.381 37.402 -4.433 1.00 49.01 N
ATOM 21 C2 A B 3 13.972 36.372 -5.189 1.00 41.20 C
ATOM 22 N3 A B 3 12.759 35.827 -5.235 1.00 51.14 N
ATOM 23 C4 A B 3 11.901 36.446 -4.392 1.00 52.62 C
ATOM 24 P A B 4 8.517 32.274 -1.156 1.00 48.09 P
ATOM 25 OP1 A B 4 7.834 30.963 -0.974 1.00 44.90 O
ATOM 26 OP2 A B 4 8.230 33.407 -0.226 1.00 51.88 O
ATOM 27 O5' A B 4 10.079 32.073 -1.089 1.00 47.92 O
TER
Atoms:
C4: (9.092,42.069,-7.228)
N3: (8.783,40.986,-8.021)
OP1: (0.391,40.719,-3.863)
OP2: (1.469,42.758,-2.768)
C2: (7.666,40.195,-7.896)
C1': (5.569,39.708,-6.751)
C3': (5.190,38.963,-4.526)
O5': (2.564,41.609,-4.707)
O4': (4.558,40.461,-6.149)
C5': (3.558,40.865,-4.020)
P: (1.181,41.958,-3.978)
C4': (4.035,39.804,-4.986)
C2': (5.721,38.477,-5.872)
O2': (4.930,37.442,-6.427)
N1: (6.798,40.560,-6.889)
O4: (10.123,42.694,-7.444)
O2: (7.425,39.243,-8.624)
C6: (7.039,41.640,-6.057)
C5: (8.137,42.382,-6.189)
O3': (4.648,37.911,-3.768)
N3: (8.783,40.986,-8.021)
OP1: (0.391,40.719,-3.863)
OP2: (1.469,42.758,-2.768)
C2: (7.666,40.195,-7.896)
C1': (5.569,39.708,-6.751)
C3': (5.190,38.963,-4.526)
O5': (2.564,41.609,-4.707)
O4': (4.558,40.461,-6.149)
C5': (3.558,40.865,-4.020)
P: (1.181,41.958,-3.978)
C4': (4.035,39.804,-4.986)
C2': (5.721,38.477,-5.872)
O2': (4.930,37.442,-6.427)
N1: (6.798,40.560,-6.889)
O4: (10.123,42.694,-7.444)
O2: (7.425,39.243,-8.624)
C6: (7.039,41.640,-6.057)
C5: (8.137,42.382,-6.189)
O3': (4.648,37.911,-3.768)
OP1: (4.505,36.651,-1.656)
OP2: (6.198,38.584,-1.916)
C3': (8.580,33.999,-3.130)
C1': (9.771,35.123,-4.807)
C5': (6.333,35.186,-3.623)
O4': (8.404,35.505,-4.883)
C8: (10.139,37.058,-3.234)
O2': (9.731,32.739,-4.851)
C6: (13.502,38.005,-3.595)
C5: (12.185,37.511,-3.563)
C4: (11.901,36.446,-4.392)
P: (5.461,37.420,-2.477)
C4': (7.601,34.535,-4.160)
C2': (9.824,33.843,-3.989)
C2: (13.972,36.372,-5.189)
N1: (14.381,37.402,-4.433)
N3: (12.759,35.827,-5.235)
N6: (13.897,39.039,-2.843)
N7: (11.073,37.880,-2.834)
N9: (10.566,36.171,-4.178)
O5': (6.606,36.450,-3.049)
O3': (8.172,32.731,-2.652)
OP2: (6.198,38.584,-1.916)
C3': (8.580,33.999,-3.130)
C1': (9.771,35.123,-4.807)
C5': (6.333,35.186,-3.623)
O4': (8.404,35.505,-4.883)
C8: (10.139,37.058,-3.234)
O2': (9.731,32.739,-4.851)
C6: (13.502,38.005,-3.595)
C5: (12.185,37.511,-3.563)
C4: (11.901,36.446,-4.392)
P: (5.461,37.420,-2.477)
C4': (7.601,34.535,-4.160)
C2': (9.824,33.843,-3.989)
C2: (13.972,36.372,-5.189)
N1: (14.381,37.402,-4.433)
N3: (12.759,35.827,-5.235)
N6: (13.897,39.039,-2.843)
N7: (11.073,37.880,-2.834)
N9: (10.566,36.171,-4.178)
O5': (6.606,36.450,-3.049)
O3': (8.172,32.731,-2.652)
Image (generated by PyMOL):