Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3K62:B2:B3
Extra
PDB:
ATOM 1 O3' G A 1 0.186 42.419 -4.438 1.00 22.76 O
ATOM 2 P U A 2 0.875 41.455 -3.321 1.00 29.30 P
ATOM 3 OP1 U A 2 0.110 40.216 -3.271 1.00 31.85 O
ATOM 4 OP2 U A 2 1.104 42.253 -2.080 1.00 26.63 O
ATOM 5 O5' U A 2 2.252 41.205 -4.043 1.00 23.94 O
ATOM 6 C5' U A 2 3.347 40.578 -3.359 1.00 23.89 C
ATOM 7 C4' U A 2 3.820 39.395 -4.212 1.00 24.62 C
ATOM 8 O4' U A 2 4.259 39.899 -5.499 1.00 24.65 O
ATOM 9 C3' U A 2 5.003 38.609 -3.690 1.00 27.15 C
ATOM 10 O3' U A 2 4.498 37.606 -2.816 1.00 33.56 O
ATOM 11 C2' U A 2 5.505 37.984 -4.987 1.00 31.89 C
ATOM 12 O2' U A 2 4.696 36.898 -5.392 1.00 32.82 O
ATOM 13 C1' U A 2 5.308 39.110 -5.999 1.00 26.17 C
ATOM 14 N1 U A 2 6.527 39.947 -6.169 1.00 26.06 N
ATOM 15 C2 U A 2 7.412 39.549 -7.133 1.00 31.45 C
ATOM 16 O2 U A 2 7.191 38.552 -7.805 1.00 27.20 O
ATOM 17 N3 U A 2 8.521 40.353 -7.275 1.00 23.67 N
ATOM 18 C4 U A 2 8.817 41.474 -6.525 1.00 25.96 C
ATOM 19 O4 U A 2 9.859 42.096 -6.743 1.00 24.50 O
ATOM 20 C5 U A 2 7.830 41.826 -5.529 1.00 26.49 C
ATOM 21 C6 U A 2 6.742 41.062 -5.386 1.00 30.05 C
ATOM 22 P G A 3 5.319 37.207 -1.493 1.00 42.27 P
ATOM 23 OP1 G A 3 4.333 36.597 -0.566 1.00 38.05 O
ATOM 24 OP2 G A 3 6.147 38.349 -1.044 1.00 39.31 O
ATOM 25 O5' G A 3 6.344 36.112 -2.044 1.00 39.48 O
TER
ATOM 1 O3' U B 2 4.498 37.606 -2.816 1.00 33.56 O
ATOM 2 P G B 3 5.319 37.207 -1.493 1.00 42.27 P
ATOM 3 OP1 G B 3 4.333 36.597 -0.566 1.00 38.05 O
ATOM 4 OP2 G B 3 6.147 38.349 -1.044 1.00 39.31 O
ATOM 5 O5' G B 3 6.344 36.112 -2.044 1.00 39.48 O
ATOM 6 C5' G B 3 5.882 34.882 -2.564 1.00 49.08 C
ATOM 7 C4' G B 3 7.063 34.053 -3.034 1.00 47.93 C
ATOM 8 O4' G B 3 7.869 34.883 -3.895 1.00 45.01 O
ATOM 9 C3' G B 3 8.065 33.585 -1.976 1.00 49.50 C
ATOM 10 O3' G B 3 7.650 32.398 -1.347 1.00 50.13 O
ATOM 11 C2' G B 3 9.247 33.261 -2.863 1.00 47.83 C
ATOM 12 O2' G B 3 9.014 32.083 -3.595 1.00 47.21 O
ATOM 13 C1' G B 3 9.208 34.444 -3.816 1.00 48.57 C
ATOM 14 N9 G B 3 10.065 35.522 -3.361 1.00 45.09 N
ATOM 15 C8 G B 3 9.762 36.611 -2.578 1.00 45.76 C
ATOM 16 N7 G B 3 10.803 37.376 -2.361 1.00 46.98 N
ATOM 17 C5 G B 3 11.843 36.747 -3.033 1.00 37.49 C
ATOM 18 C6 G B 3 13.204 37.099 -3.175 1.00 42.43 C
ATOM 19 O6 G B 3 13.798 38.080 -2.710 1.00 50.63 O
ATOM 20 N1 G B 3 13.893 36.170 -3.951 1.00 40.12 N
ATOM 21 C2 G B 3 13.335 35.050 -4.519 1.00 38.35 C
ATOM 22 N2 G B 3 14.138 34.256 -5.231 1.00 40.38 N
ATOM 23 N3 G B 3 12.070 34.711 -4.397 1.00 40.31 N
ATOM 24 C4 G B 3 11.395 35.607 -3.648 1.00 37.85 C
ATOM 25 P U B 4 8.379 31.890 -0.006 1.00 50.99 P
ATOM 26 OP1 U B 4 7.825 30.538 0.248 1.00 62.95 O
ATOM 27 OP2 U B 4 8.243 32.946 1.027 1.00 45.29 O
ATOM 28 O5' U B 4 9.936 31.766 -0.360 1.00 47.18 O
TER
ATOM 2 P U A 2 0.875 41.455 -3.321 1.00 29.30 P
ATOM 3 OP1 U A 2 0.110 40.216 -3.271 1.00 31.85 O
ATOM 4 OP2 U A 2 1.104 42.253 -2.080 1.00 26.63 O
ATOM 5 O5' U A 2 2.252 41.205 -4.043 1.00 23.94 O
ATOM 6 C5' U A 2 3.347 40.578 -3.359 1.00 23.89 C
ATOM 7 C4' U A 2 3.820 39.395 -4.212 1.00 24.62 C
ATOM 8 O4' U A 2 4.259 39.899 -5.499 1.00 24.65 O
ATOM 9 C3' U A 2 5.003 38.609 -3.690 1.00 27.15 C
ATOM 10 O3' U A 2 4.498 37.606 -2.816 1.00 33.56 O
ATOM 11 C2' U A 2 5.505 37.984 -4.987 1.00 31.89 C
ATOM 12 O2' U A 2 4.696 36.898 -5.392 1.00 32.82 O
ATOM 13 C1' U A 2 5.308 39.110 -5.999 1.00 26.17 C
ATOM 14 N1 U A 2 6.527 39.947 -6.169 1.00 26.06 N
ATOM 15 C2 U A 2 7.412 39.549 -7.133 1.00 31.45 C
ATOM 16 O2 U A 2 7.191 38.552 -7.805 1.00 27.20 O
ATOM 17 N3 U A 2 8.521 40.353 -7.275 1.00 23.67 N
ATOM 18 C4 U A 2 8.817 41.474 -6.525 1.00 25.96 C
ATOM 19 O4 U A 2 9.859 42.096 -6.743 1.00 24.50 O
ATOM 20 C5 U A 2 7.830 41.826 -5.529 1.00 26.49 C
ATOM 21 C6 U A 2 6.742 41.062 -5.386 1.00 30.05 C
ATOM 22 P G A 3 5.319 37.207 -1.493 1.00 42.27 P
ATOM 23 OP1 G A 3 4.333 36.597 -0.566 1.00 38.05 O
ATOM 24 OP2 G A 3 6.147 38.349 -1.044 1.00 39.31 O
ATOM 25 O5' G A 3 6.344 36.112 -2.044 1.00 39.48 O
TER
ATOM 1 O3' U B 2 4.498 37.606 -2.816 1.00 33.56 O
ATOM 2 P G B 3 5.319 37.207 -1.493 1.00 42.27 P
ATOM 3 OP1 G B 3 4.333 36.597 -0.566 1.00 38.05 O
ATOM 4 OP2 G B 3 6.147 38.349 -1.044 1.00 39.31 O
ATOM 5 O5' G B 3 6.344 36.112 -2.044 1.00 39.48 O
ATOM 6 C5' G B 3 5.882 34.882 -2.564 1.00 49.08 C
ATOM 7 C4' G B 3 7.063 34.053 -3.034 1.00 47.93 C
ATOM 8 O4' G B 3 7.869 34.883 -3.895 1.00 45.01 O
ATOM 9 C3' G B 3 8.065 33.585 -1.976 1.00 49.50 C
ATOM 10 O3' G B 3 7.650 32.398 -1.347 1.00 50.13 O
ATOM 11 C2' G B 3 9.247 33.261 -2.863 1.00 47.83 C
ATOM 12 O2' G B 3 9.014 32.083 -3.595 1.00 47.21 O
ATOM 13 C1' G B 3 9.208 34.444 -3.816 1.00 48.57 C
ATOM 14 N9 G B 3 10.065 35.522 -3.361 1.00 45.09 N
ATOM 15 C8 G B 3 9.762 36.611 -2.578 1.00 45.76 C
ATOM 16 N7 G B 3 10.803 37.376 -2.361 1.00 46.98 N
ATOM 17 C5 G B 3 11.843 36.747 -3.033 1.00 37.49 C
ATOM 18 C6 G B 3 13.204 37.099 -3.175 1.00 42.43 C
ATOM 19 O6 G B 3 13.798 38.080 -2.710 1.00 50.63 O
ATOM 20 N1 G B 3 13.893 36.170 -3.951 1.00 40.12 N
ATOM 21 C2 G B 3 13.335 35.050 -4.519 1.00 38.35 C
ATOM 22 N2 G B 3 14.138 34.256 -5.231 1.00 40.38 N
ATOM 23 N3 G B 3 12.070 34.711 -4.397 1.00 40.31 N
ATOM 24 C4 G B 3 11.395 35.607 -3.648 1.00 37.85 C
ATOM 25 P U B 4 8.379 31.890 -0.006 1.00 50.99 P
ATOM 26 OP1 U B 4 7.825 30.538 0.248 1.00 62.95 O
ATOM 27 OP2 U B 4 8.243 32.946 1.027 1.00 45.29 O
ATOM 28 O5' U B 4 9.936 31.766 -0.360 1.00 47.18 O
TER
Atoms:
C4: (8.817,41.474,-6.525)
N3: (8.521,40.353,-7.275)
OP1: (0.110,40.216,-3.271)
OP2: (1.104,42.253,-2.080)
C2: (7.412,39.549,-7.133)
C1': (5.308,39.110,-5.999)
C3': (5.003,38.609,-3.690)
O5': (2.252,41.205,-4.043)
O4': (4.259,39.899,-5.499)
C5': (3.347,40.578,-3.359)
P: (0.875,41.455,-3.321)
C4': (3.820,39.395,-4.212)
C2': (5.505,37.984,-4.987)
O2': (4.696,36.898,-5.392)
N1: (6.527,39.947,-6.169)
O4: (9.859,42.096,-6.743)
O2: (7.191,38.552,-7.805)
C6: (6.742,41.062,-5.386)
C5: (7.830,41.826,-5.529)
O3': (4.498,37.606,-2.816)
N3: (8.521,40.353,-7.275)
OP1: (0.110,40.216,-3.271)
OP2: (1.104,42.253,-2.080)
C2: (7.412,39.549,-7.133)
C1': (5.308,39.110,-5.999)
C3': (5.003,38.609,-3.690)
O5': (2.252,41.205,-4.043)
O4': (4.259,39.899,-5.499)
C5': (3.347,40.578,-3.359)
P: (0.875,41.455,-3.321)
C4': (3.820,39.395,-4.212)
C2': (5.505,37.984,-4.987)
O2': (4.696,36.898,-5.392)
N1: (6.527,39.947,-6.169)
O4: (9.859,42.096,-6.743)
O2: (7.191,38.552,-7.805)
C6: (6.742,41.062,-5.386)
C5: (7.830,41.826,-5.529)
O3': (4.498,37.606,-2.816)
OP1: (4.333,36.597,-0.566)
OP2: (6.147,38.349,-1.044)
C3': (8.065,33.585,-1.976)
C1': (9.208,34.444,-3.816)
C5': (5.882,34.882,-2.564)
O6: (13.798,38.080,-2.710)
O4': (7.869,34.883,-3.895)
C8: (9.762,36.611,-2.578)
C2: (13.335,35.050,-4.519)
C6: (13.204,37.099,-3.175)
C5: (11.843,36.747,-3.033)
C4: (11.395,35.607,-3.648)
P: (5.319,37.207,-1.493)
C4': (7.063,34.053,-3.034)
C2': (9.247,33.261,-2.863)
O2': (9.014,32.083,-3.595)
N1: (13.893,36.170,-3.951)
N2: (14.138,34.256,-5.231)
N3: (12.070,34.711,-4.397)
N7: (10.803,37.376,-2.361)
N9: (10.065,35.522,-3.361)
O5': (6.344,36.112,-2.044)
O3': (7.650,32.398,-1.347)
OP2: (6.147,38.349,-1.044)
C3': (8.065,33.585,-1.976)
C1': (9.208,34.444,-3.816)
C5': (5.882,34.882,-2.564)
O6: (13.798,38.080,-2.710)
O4': (7.869,34.883,-3.895)
C8: (9.762,36.611,-2.578)
C2: (13.335,35.050,-4.519)
C6: (13.204,37.099,-3.175)
C5: (11.843,36.747,-3.033)
C4: (11.395,35.607,-3.648)
P: (5.319,37.207,-1.493)
C4': (7.063,34.053,-3.034)
C2': (9.247,33.261,-2.863)
O2': (9.014,32.083,-3.595)
N1: (13.893,36.170,-3.951)
N2: (14.138,34.256,-5.231)
N3: (12.070,34.711,-4.397)
N7: (10.803,37.376,-2.361)
N9: (10.065,35.522,-3.361)
O5': (6.344,36.112,-2.044)
O3': (7.650,32.398,-1.347)
Image (generated by PyMOL):