ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3K64:B2:B3

Extra

PDB:
ATOM 1 O3' G A 1 0.203 -42.387 3.446 1.00 20.22 O
ATOM 2 P U A 2 0.887 -41.457 2.328 1.00 24.73 P
ATOM 3 OP1 U A 2 0.142 -40.183 2.321 1.00 28.70 O
ATOM 4 OP2 U A 2 1.096 -42.227 1.083 1.00 23.43 O
ATOM 5 O5' U A 2 2.338 -41.239 2.984 1.00 21.06 O
ATOM 6 C5' U A 2 3.345 -40.497 2.315 1.00 22.54 C
ATOM 7 C4' U A 2 3.811 -39.373 3.228 1.00 22.85 C
ATOM 8 O4' U A 2 4.288 -39.917 4.482 1.00 21.48 O
ATOM 9 C3' U A 2 4.976 -38.555 2.718 1.00 24.43 C
ATOM 10 O3' U A 2 4.490 -37.548 1.827 1.00 30.10 O
ATOM 11 C2' U A 2 5.488 -37.944 4.009 1.00 26.78 C
ATOM 12 O2' U A 2 4.692 -36.855 4.445 1.00 29.82 O
ATOM 13 C1' U A 2 5.312 -39.089 4.994 1.00 21.27 C
ATOM 14 N1 U A 2 6.538 -39.913 5.187 1.00 21.88 N
ATOM 15 C2 U A 2 7.425 -39.497 6.138 1.00 21.62 C
ATOM 16 O2 U A 2 7.227 -38.469 6.765 1.00 20.13 O
ATOM 17 N3 U A 2 8.528 -40.312 6.305 1.00 19.54 N
ATOM 18 C4 U A 2 8.797 -41.478 5.589 1.00 23.09 C
ATOM 19 O4 U A 2 9.822 -42.117 5.813 1.00 19.43 O
ATOM 20 C5 U A 2 7.808 -41.856 4.608 1.00 21.09 C
ATOM 21 C6 U A 2 6.737 -41.063 4.445 1.00 21.31 C
ATOM 22 P G A 3 5.296 -37.189 0.487 1.00 40.53 P
ATOM 23 OP1 G A 3 4.322 -36.566 -0.438 1.00 35.81 O
ATOM 24 OP2 G A 3 6.074 -38.365 0.038 1.00 38.44 O
ATOM 25 O5' G A 3 6.349 -36.108 1.008 1.00 35.98 O
TER

ATOM 1 O3' U B 2 4.490 -37.548 1.827 1.00 30.10 O
ATOM 2 P G B 3 5.296 -37.189 0.487 1.00 40.53 P
ATOM 3 OP1 G B 3 4.322 -36.566 -0.438 1.00 35.81 O
ATOM 4 OP2 G B 3 6.074 -38.365 0.038 1.00 38.44 O
ATOM 5 O5' G B 3 6.349 -36.108 1.008 1.00 35.98 O
ATOM 6 C5' G B 3 5.906 -34.954 1.697 1.00 41.21 C
ATOM 7 C4' G B 3 7.080 -34.076 2.091 1.00 40.51 C
ATOM 8 O4' G B 3 7.937 -34.834 2.976 1.00 38.11 O
ATOM 9 C3' G B 3 8.019 -33.612 0.976 1.00 42.40 C
ATOM 10 O3' G B 3 7.559 -32.412 0.378 1.00 46.71 O
ATOM 11 C2' G B 3 9.230 -33.251 1.799 1.00 36.21 C
ATOM 12 O2' G B 3 8.974 -32.036 2.458 1.00 37.42 O
ATOM 13 C1' G B 3 9.262 -34.376 2.824 1.00 39.13 C
ATOM 14 N9 G B 3 10.127 -35.460 2.391 1.00 36.68 N
ATOM 15 C8 G B 3 9.819 -36.551 1.621 1.00 35.84 C
ATOM 16 N7 G B 3 10.848 -37.325 1.399 1.00 38.88 N
ATOM 17 C5 G B 3 11.900 -36.698 2.056 1.00 32.43 C
ATOM 18 C6 G B 3 13.258 -37.062 2.193 1.00 36.00 C
ATOM 19 O6 G B 3 13.859 -38.039 1.737 1.00 45.71 O
ATOM 20 N1 G B 3 13.962 -36.132 2.951 1.00 32.46 N
ATOM 21 C2 G B 3 13.419 -35.004 3.515 1.00 34.60 C
ATOM 22 N2 G B 3 14.254 -34.222 4.209 1.00 33.68 N
ATOM 23 N3 G B 3 12.151 -34.656 3.405 1.00 36.60 N
ATOM 24 C4 G B 3 11.462 -35.551 2.668 1.00 35.01 C
ATOM 25 P U B 4 8.202 -31.844 -0.982 1.00 45.36 P
ATOM 26 OP1 U B 4 7.612 -30.500 -1.153 1.00 56.09 O
ATOM 27 OP2 U B 4 8.037 -32.865 -2.042 1.00 41.60 O
ATOM 28 O5' U B 4 9.767 -31.685 -0.705 1.00 40.59 O
TER

Atoms:
C4: (8.797,-41.478,5.589)
N3: (8.528,-40.312,6.305)
OP1: (0.142,-40.183,2.321)
OP2: (1.096,-42.227,1.083)
C2: (7.425,-39.497,6.138)
C1': (5.312,-39.089,4.994)
C3': (4.976,-38.555,2.718)
O5': (2.338,-41.239,2.984)
O4': (4.288,-39.917,4.482)
C5': (3.345,-40.497,2.315)
P: (0.887,-41.457,2.328)
C4': (3.811,-39.373,3.228)
C2': (5.488,-37.944,4.009)
O2': (4.692,-36.855,4.445)
N1: (6.538,-39.913,5.187)
O4: (9.822,-42.117,5.813)
O2: (7.227,-38.469,6.765)
C6: (6.737,-41.063,4.445)
C5: (7.808,-41.856,4.608)
O3': (4.490,-37.548,1.827)
OP1: (4.322,-36.566,-0.438)
OP2: (6.074,-38.365,0.038)
C3': (8.019,-33.612,0.976)
C1': (9.262,-34.376,2.824)
C5': (5.906,-34.954,1.697)
O6: (13.859,-38.039,1.737)
O4': (7.937,-34.834,2.976)
C8: (9.819,-36.551,1.621)
C2: (13.419,-35.004,3.515)
C6: (13.258,-37.062,2.193)
C5: (11.900,-36.698,2.056)
C4: (11.462,-35.551,2.668)
P: (5.296,-37.189,0.487)
C4': (7.080,-34.076,2.091)
C2': (9.230,-33.251,1.799)
O2': (8.974,-32.036,2.458)
N1: (13.962,-36.132,2.951)
N2: (14.254,-34.222,4.209)
N3: (12.151,-34.656,3.405)
N7: (10.848,-37.325,1.399)
N9: (10.127,-35.460,2.391)
O5': (6.349,-36.108,1.008)
O3': (7.559,-32.412,0.378)
Image (generated by PyMOL):
PyMOL image
show in jmol