Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2VPL:B46:B0
Extra
PDB:
ATOM 1 O3' C A 45 41.303 4.991 -4.412 1.00 39.50 O
ATOM 2 P C A 46 41.753 3.557 -3.857 1.00 37.89 P
ATOM 3 OP1 C A 46 43.016 3.139 -4.506 1.00 34.83 O
ATOM 4 OP2 C A 46 40.580 2.656 -3.941 1.00 31.69 O
ATOM 5 O5' C A 46 42.108 3.880 -2.330 1.00 35.37 O
ATOM 6 C5' C A 46 43.334 4.552 -2.096 1.00 45.10 C
ATOM 7 C4' C A 46 43.458 4.877 -0.630 1.00 54.49 C
ATOM 8 O4' C A 46 42.200 5.390 -0.133 1.00 50.15 O
ATOM 9 C3' C A 46 43.657 3.638 0.217 1.00 66.68 C
ATOM 10 O3' C A 46 44.992 3.167 0.108 1.00 81.34 O
ATOM 11 C2' C A 46 43.305 4.200 1.588 1.00 61.21 C
ATOM 12 O2' C A 46 44.336 4.982 2.163 1.00 61.87 O
ATOM 13 C1' C A 46 42.107 5.088 1.253 1.00 50.32 C
ATOM 14 N1 C A 46 40.752 4.502 1.572 1.00 37.89 N
ATOM 15 C2 C A 46 40.292 4.398 2.905 1.00 34.61 C
ATOM 16 O2 C A 46 40.978 4.763 3.868 1.00 44.27 O
ATOM 17 N3 C A 46 39.070 3.873 3.137 1.00 30.95 N
ATOM 18 C4 C A 46 38.300 3.478 2.127 1.00 34.36 C
ATOM 19 N4 C A 46 37.103 2.980 2.446 1.00 31.96 N
ATOM 20 C5 C A 46 38.729 3.574 0.768 1.00 29.47 C
ATOM 21 C6 C A 46 39.949 4.090 0.548 1.00 22.87 C
ATOM 22 P C A 47 45.335 1.675 0.568 1.00 71.75 P
ATOM 23 OP1 C A 47 46.533 1.233 -0.178 1.00105.92 O
ATOM 24 OP2 C A 47 44.082 0.894 0.468 1.00 43.98 O
ATOM 25 O5' C A 47 45.724 1.914 2.110 1.00 99.27 O
TER
ATOM 1 P G B 0 31.868 3.508 11.531 1.00104.90 P
ATOM 2 OP1 G B 0 31.959 4.603 10.540 1.00100.32 O
ATOM 3 OP2 G B 0 31.051 3.716 12.748 1.00101.35 O
ATOM 4 O5' G B 0 33.354 3.158 12.017 1.00 93.56 O
ATOM 5 C5' G B 0 34.099 4.079 12.809 1.00 82.40 C
ATOM 6 C4' G B 0 35.562 4.115 12.398 1.00 79.87 C
ATOM 7 O4' G B 0 35.880 2.983 11.546 1.00 76.86 O
ATOM 8 C3' G B 0 35.959 5.298 11.531 1.00 77.36 C
ATOM 9 O3' G B 0 36.143 6.487 12.283 1.00 82.61 O
ATOM 10 C2' G B 0 37.259 4.796 10.920 1.00 71.38 C
ATOM 11 O2' G B 0 38.359 4.847 11.811 1.00 63.47 O
ATOM 12 C1' G B 0 36.879 3.350 10.605 1.00 44.82 C
ATOM 13 N9 G B 0 36.352 3.102 9.260 1.00 49.46 N
ATOM 14 C8 G B 0 35.095 2.632 8.967 1.00 48.06 C
ATOM 15 N7 G B 0 34.871 2.480 7.690 1.00 48.87 N
ATOM 16 C5 G B 0 36.065 2.866 7.089 1.00 40.06 C
ATOM 17 C6 G B 0 36.411 2.911 5.713 1.00 40.24 C
ATOM 18 O6 G B 0 35.707 2.602 4.736 1.00 39.62 O
ATOM 19 N1 G B 0 37.716 3.357 5.520 1.00 24.19 N
ATOM 20 C2 G B 0 38.575 3.722 6.535 1.00 51.68 C
ATOM 21 N2 G B 0 39.804 4.129 6.178 1.00 25.67 N
ATOM 22 N3 G B 0 38.259 3.686 7.824 1.00 36.70 N
ATOM 23 C4 G B 0 36.989 3.249 8.036 1.00 37.62 C
ATOM 24 P G B 1 35.635 7.842 11.607 1.00 65.44 P
ATOM 25 OP1 G B 1 35.506 8.894 12.642 1.00 63.10 O
ATOM 26 OP2 G B 1 34.474 7.472 10.764 1.00 35.36 O
ATOM 27 O5' G B 1 36.836 8.216 10.627 1.00 66.34 O
TER
ATOM 2 P C A 46 41.753 3.557 -3.857 1.00 37.89 P
ATOM 3 OP1 C A 46 43.016 3.139 -4.506 1.00 34.83 O
ATOM 4 OP2 C A 46 40.580 2.656 -3.941 1.00 31.69 O
ATOM 5 O5' C A 46 42.108 3.880 -2.330 1.00 35.37 O
ATOM 6 C5' C A 46 43.334 4.552 -2.096 1.00 45.10 C
ATOM 7 C4' C A 46 43.458 4.877 -0.630 1.00 54.49 C
ATOM 8 O4' C A 46 42.200 5.390 -0.133 1.00 50.15 O
ATOM 9 C3' C A 46 43.657 3.638 0.217 1.00 66.68 C
ATOM 10 O3' C A 46 44.992 3.167 0.108 1.00 81.34 O
ATOM 11 C2' C A 46 43.305 4.200 1.588 1.00 61.21 C
ATOM 12 O2' C A 46 44.336 4.982 2.163 1.00 61.87 O
ATOM 13 C1' C A 46 42.107 5.088 1.253 1.00 50.32 C
ATOM 14 N1 C A 46 40.752 4.502 1.572 1.00 37.89 N
ATOM 15 C2 C A 46 40.292 4.398 2.905 1.00 34.61 C
ATOM 16 O2 C A 46 40.978 4.763 3.868 1.00 44.27 O
ATOM 17 N3 C A 46 39.070 3.873 3.137 1.00 30.95 N
ATOM 18 C4 C A 46 38.300 3.478 2.127 1.00 34.36 C
ATOM 19 N4 C A 46 37.103 2.980 2.446 1.00 31.96 N
ATOM 20 C5 C A 46 38.729 3.574 0.768 1.00 29.47 C
ATOM 21 C6 C A 46 39.949 4.090 0.548 1.00 22.87 C
ATOM 22 P C A 47 45.335 1.675 0.568 1.00 71.75 P
ATOM 23 OP1 C A 47 46.533 1.233 -0.178 1.00105.92 O
ATOM 24 OP2 C A 47 44.082 0.894 0.468 1.00 43.98 O
ATOM 25 O5' C A 47 45.724 1.914 2.110 1.00 99.27 O
TER
ATOM 1 P G B 0 31.868 3.508 11.531 1.00104.90 P
ATOM 2 OP1 G B 0 31.959 4.603 10.540 1.00100.32 O
ATOM 3 OP2 G B 0 31.051 3.716 12.748 1.00101.35 O
ATOM 4 O5' G B 0 33.354 3.158 12.017 1.00 93.56 O
ATOM 5 C5' G B 0 34.099 4.079 12.809 1.00 82.40 C
ATOM 6 C4' G B 0 35.562 4.115 12.398 1.00 79.87 C
ATOM 7 O4' G B 0 35.880 2.983 11.546 1.00 76.86 O
ATOM 8 C3' G B 0 35.959 5.298 11.531 1.00 77.36 C
ATOM 9 O3' G B 0 36.143 6.487 12.283 1.00 82.61 O
ATOM 10 C2' G B 0 37.259 4.796 10.920 1.00 71.38 C
ATOM 11 O2' G B 0 38.359 4.847 11.811 1.00 63.47 O
ATOM 12 C1' G B 0 36.879 3.350 10.605 1.00 44.82 C
ATOM 13 N9 G B 0 36.352 3.102 9.260 1.00 49.46 N
ATOM 14 C8 G B 0 35.095 2.632 8.967 1.00 48.06 C
ATOM 15 N7 G B 0 34.871 2.480 7.690 1.00 48.87 N
ATOM 16 C5 G B 0 36.065 2.866 7.089 1.00 40.06 C
ATOM 17 C6 G B 0 36.411 2.911 5.713 1.00 40.24 C
ATOM 18 O6 G B 0 35.707 2.602 4.736 1.00 39.62 O
ATOM 19 N1 G B 0 37.716 3.357 5.520 1.00 24.19 N
ATOM 20 C2 G B 0 38.575 3.722 6.535 1.00 51.68 C
ATOM 21 N2 G B 0 39.804 4.129 6.178 1.00 25.67 N
ATOM 22 N3 G B 0 38.259 3.686 7.824 1.00 36.70 N
ATOM 23 C4 G B 0 36.989 3.249 8.036 1.00 37.62 C
ATOM 24 P G B 1 35.635 7.842 11.607 1.00 65.44 P
ATOM 25 OP1 G B 1 35.506 8.894 12.642 1.00 63.10 O
ATOM 26 OP2 G B 1 34.474 7.472 10.764 1.00 35.36 O
ATOM 27 O5' G B 1 36.836 8.216 10.627 1.00 66.34 O
TER
Atoms:
C2: (40.292,4.398,2.905)
OP1: (43.016,3.139,-4.506)
OP2: (40.580,2.656,-3.941)
C4: (38.300,3.478,2.127)
O5': (42.108,3.880,-2.330)
C3': (43.657,3.638,0.217)
C1': (42.107,5.088,1.253)
O4': (42.200,5.390,-0.133)
C5': (43.334,4.552,-2.096)
P: (41.753,3.557,-3.857)
O2: (40.978,4.763,3.868)
C4': (43.458,4.877,-0.630)
C2': (43.305,4.200,1.588)
O2': (44.336,4.982,2.163)
N1: (40.752,4.502,1.572)
N3: (39.070,3.873,3.137)
N4: (37.103,2.980,2.446)
C6: (39.949,4.090,0.548)
C5: (38.729,3.574,0.768)
O3': (44.992,3.167,0.108)
OP1: (43.016,3.139,-4.506)
OP2: (40.580,2.656,-3.941)
C4: (38.300,3.478,2.127)
O5': (42.108,3.880,-2.330)
C3': (43.657,3.638,0.217)
C1': (42.107,5.088,1.253)
O4': (42.200,5.390,-0.133)
C5': (43.334,4.552,-2.096)
P: (41.753,3.557,-3.857)
O2: (40.978,4.763,3.868)
C4': (43.458,4.877,-0.630)
C2': (43.305,4.200,1.588)
O2': (44.336,4.982,2.163)
N1: (40.752,4.502,1.572)
N3: (39.070,3.873,3.137)
N4: (37.103,2.980,2.446)
C6: (39.949,4.090,0.548)
C5: (38.729,3.574,0.768)
O3': (44.992,3.167,0.108)
OP1: (31.959,4.603,10.540)
OP2: (31.051,3.716,12.748)
C3': (35.959,5.298,11.531)
C1': (36.879,3.350,10.605)
C5': (34.099,4.079,12.809)
O6: (35.707,2.602,4.736)
O4': (35.880,2.983,11.546)
C8: (35.095,2.632,8.967)
C2: (38.575,3.722,6.535)
C6: (36.411,2.911,5.713)
C5: (36.065,2.866,7.089)
C4: (36.989,3.249,8.036)
P: (31.868,3.508,11.531)
C4': (35.562,4.115,12.398)
C2': (37.259,4.796,10.920)
O2': (38.359,4.847,11.811)
N1: (37.716,3.357,5.520)
N2: (39.804,4.129,6.178)
N3: (38.259,3.686,7.824)
N7: (34.871,2.480,7.690)
N9: (36.352,3.102,9.260)
O5': (33.354,3.158,12.017)
O3': (36.143,6.487,12.283)
OP2: (31.051,3.716,12.748)
C3': (35.959,5.298,11.531)
C1': (36.879,3.350,10.605)
C5': (34.099,4.079,12.809)
O6: (35.707,2.602,4.736)
O4': (35.880,2.983,11.546)
C8: (35.095,2.632,8.967)
C2: (38.575,3.722,6.535)
C6: (36.411,2.911,5.713)
C5: (36.065,2.866,7.089)
C4: (36.989,3.249,8.036)
P: (31.868,3.508,11.531)
C4': (35.562,4.115,12.398)
C2': (37.259,4.796,10.920)
O2': (38.359,4.847,11.811)
N1: (37.716,3.357,5.520)
N2: (39.804,4.129,6.178)
N3: (38.259,3.686,7.824)
N7: (34.871,2.480,7.690)
N9: (36.352,3.102,9.260)
O5': (33.354,3.158,12.017)
O3': (36.143,6.487,12.283)
Image (generated by PyMOL):