Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3Q0M:D2:D3
Extra
PDB:
ATOM 1 O3' G A 1 8.821 -13.552 5.220 1.00 22.61 O
ATOM 2 P U A 2 8.539 -12.178 5.966 1.00 25.17 P
ATOM 3 OP1 U A 2 7.972 -11.239 4.974 1.00 25.44 O
ATOM 4 OP2 U A 2 9.717 -11.838 6.793 1.00 28.33 O
ATOM 5 O5' U A 2 7.410 -12.538 7.043 1.00 27.74 O
ATOM 6 C5' U A 2 7.021 -11.614 8.049 1.00 26.04 C
ATOM 7 C4' U A 2 5.666 -11.030 7.745 1.00 26.44 C
ATOM 8 O4' U A 2 4.727 -12.082 7.397 1.00 32.90 O
ATOM 9 C3' U A 2 4.971 -10.286 8.872 1.00 31.66 C
ATOM 10 O3' U A 2 5.455 -8.967 9.000 1.00 25.17 O
ATOM 11 C2' U A 2 3.532 -10.311 8.391 1.00 27.43 C
ATOM 12 O2' U A 2 3.408 -9.389 7.310 1.00 25.29 O
ATOM 13 C1' U A 2 3.434 -11.744 7.855 1.00 25.68 C
ATOM 14 N1 U A 2 3.114 -12.785 8.888 1.00 25.46 N
ATOM 15 C2 U A 2 1.819 -13.061 9.259 1.00 25.22 C
ATOM 16 O2 U A 2 0.843 -12.497 8.792 1.00 26.58 O
ATOM 17 N3 U A 2 1.687 -14.041 10.212 1.00 25.28 N
ATOM 18 C4 U A 2 2.683 -14.756 10.838 1.00 25.31 C
ATOM 19 O4 U A 2 2.403 -15.596 11.683 1.00 25.50 O
ATOM 20 C5 U A 2 4.002 -14.417 10.396 1.00 25.26 C
ATOM 21 C6 U A 2 4.155 -13.472 9.464 1.00 26.04 C
ATOM 22 P A A 3 5.976 -8.423 10.400 1.00 23.05 P
ATOM 23 OP1 A A 3 7.399 -8.104 10.199 1.00 27.60 O
ATOM 24 OP2 A A 3 5.525 -9.208 11.574 1.00 24.01 O
ATOM 25 O5' A A 3 5.107 -7.081 10.454 1.00 22.30 O
TER
ATOM 1 O3' U B 2 5.455 -8.967 9.000 1.00 25.17 O
ATOM 2 P A B 3 5.976 -8.423 10.400 1.00 23.05 P
ATOM 3 OP1 A B 3 7.399 -8.104 10.199 1.00 27.60 O
ATOM 4 OP2 A B 3 5.525 -9.208 11.574 1.00 24.01 O
ATOM 5 O5' A B 3 5.107 -7.081 10.454 1.00 22.30 O
ATOM 6 C5' A B 3 3.932 -6.942 9.666 1.00 24.49 C
ATOM 7 C4' A B 3 2.777 -6.469 10.514 1.00 24.38 C
ATOM 8 O4' A B 3 2.016 -7.612 10.995 1.00 25.73 O
ATOM 9 C3' A B 3 3.139 -5.734 11.797 1.00 22.86 C
ATOM 10 O3' A B 3 3.548 -4.388 11.616 1.00 22.30 O
ATOM 11 C2' A B 3 1.867 -5.887 12.619 1.00 25.10 C
ATOM 12 O2' A B 3 0.858 -5.006 12.140 1.00 22.55 O
ATOM 13 C1' A B 3 1.449 -7.309 12.251 1.00 27.48 C
ATOM 14 N9 A B 3 1.885 -8.304 13.242 1.00 25.96 N
ATOM 15 C8 A B 3 3.069 -8.968 13.341 1.00 22.38 C
ATOM 16 N7 A B 3 3.106 -9.802 14.358 1.00 25.95 N
ATOM 17 C5 A B 3 1.861 -9.662 14.952 1.00 24.94 C
ATOM 18 C6 A B 3 1.237 -10.255 16.071 1.00 24.32 C
ATOM 19 N6 A B 3 1.816 -11.166 16.854 1.00 26.08 N
ATOM 20 N1 A B 3 -0.023 -9.877 16.374 1.00 26.08 N
ATOM 21 C2 A B 3 -0.632 -8.972 15.611 1.00 25.92 C
ATOM 22 N3 A B 3 -0.149 -8.354 14.540 1.00 25.80 N
ATOM 23 C4 A B 3 1.103 -8.747 14.268 1.00 25.22 C
ATOM 24 P G B 4 4.301 -3.666 12.839 1.00 28.31 P
ATOM 25 OP1 G B 4 5.275 -2.707 12.275 1.00 28.25 O
ATOM 26 OP2 G B 4 4.737 -4.686 13.831 1.00 28.16 O
ATOM 27 O5' G B 4 3.135 -2.870 13.603 1.00 27.66 O
TER
ATOM 2 P U A 2 8.539 -12.178 5.966 1.00 25.17 P
ATOM 3 OP1 U A 2 7.972 -11.239 4.974 1.00 25.44 O
ATOM 4 OP2 U A 2 9.717 -11.838 6.793 1.00 28.33 O
ATOM 5 O5' U A 2 7.410 -12.538 7.043 1.00 27.74 O
ATOM 6 C5' U A 2 7.021 -11.614 8.049 1.00 26.04 C
ATOM 7 C4' U A 2 5.666 -11.030 7.745 1.00 26.44 C
ATOM 8 O4' U A 2 4.727 -12.082 7.397 1.00 32.90 O
ATOM 9 C3' U A 2 4.971 -10.286 8.872 1.00 31.66 C
ATOM 10 O3' U A 2 5.455 -8.967 9.000 1.00 25.17 O
ATOM 11 C2' U A 2 3.532 -10.311 8.391 1.00 27.43 C
ATOM 12 O2' U A 2 3.408 -9.389 7.310 1.00 25.29 O
ATOM 13 C1' U A 2 3.434 -11.744 7.855 1.00 25.68 C
ATOM 14 N1 U A 2 3.114 -12.785 8.888 1.00 25.46 N
ATOM 15 C2 U A 2 1.819 -13.061 9.259 1.00 25.22 C
ATOM 16 O2 U A 2 0.843 -12.497 8.792 1.00 26.58 O
ATOM 17 N3 U A 2 1.687 -14.041 10.212 1.00 25.28 N
ATOM 18 C4 U A 2 2.683 -14.756 10.838 1.00 25.31 C
ATOM 19 O4 U A 2 2.403 -15.596 11.683 1.00 25.50 O
ATOM 20 C5 U A 2 4.002 -14.417 10.396 1.00 25.26 C
ATOM 21 C6 U A 2 4.155 -13.472 9.464 1.00 26.04 C
ATOM 22 P A A 3 5.976 -8.423 10.400 1.00 23.05 P
ATOM 23 OP1 A A 3 7.399 -8.104 10.199 1.00 27.60 O
ATOM 24 OP2 A A 3 5.525 -9.208 11.574 1.00 24.01 O
ATOM 25 O5' A A 3 5.107 -7.081 10.454 1.00 22.30 O
TER
ATOM 1 O3' U B 2 5.455 -8.967 9.000 1.00 25.17 O
ATOM 2 P A B 3 5.976 -8.423 10.400 1.00 23.05 P
ATOM 3 OP1 A B 3 7.399 -8.104 10.199 1.00 27.60 O
ATOM 4 OP2 A B 3 5.525 -9.208 11.574 1.00 24.01 O
ATOM 5 O5' A B 3 5.107 -7.081 10.454 1.00 22.30 O
ATOM 6 C5' A B 3 3.932 -6.942 9.666 1.00 24.49 C
ATOM 7 C4' A B 3 2.777 -6.469 10.514 1.00 24.38 C
ATOM 8 O4' A B 3 2.016 -7.612 10.995 1.00 25.73 O
ATOM 9 C3' A B 3 3.139 -5.734 11.797 1.00 22.86 C
ATOM 10 O3' A B 3 3.548 -4.388 11.616 1.00 22.30 O
ATOM 11 C2' A B 3 1.867 -5.887 12.619 1.00 25.10 C
ATOM 12 O2' A B 3 0.858 -5.006 12.140 1.00 22.55 O
ATOM 13 C1' A B 3 1.449 -7.309 12.251 1.00 27.48 C
ATOM 14 N9 A B 3 1.885 -8.304 13.242 1.00 25.96 N
ATOM 15 C8 A B 3 3.069 -8.968 13.341 1.00 22.38 C
ATOM 16 N7 A B 3 3.106 -9.802 14.358 1.00 25.95 N
ATOM 17 C5 A B 3 1.861 -9.662 14.952 1.00 24.94 C
ATOM 18 C6 A B 3 1.237 -10.255 16.071 1.00 24.32 C
ATOM 19 N6 A B 3 1.816 -11.166 16.854 1.00 26.08 N
ATOM 20 N1 A B 3 -0.023 -9.877 16.374 1.00 26.08 N
ATOM 21 C2 A B 3 -0.632 -8.972 15.611 1.00 25.92 C
ATOM 22 N3 A B 3 -0.149 -8.354 14.540 1.00 25.80 N
ATOM 23 C4 A B 3 1.103 -8.747 14.268 1.00 25.22 C
ATOM 24 P G B 4 4.301 -3.666 12.839 1.00 28.31 P
ATOM 25 OP1 G B 4 5.275 -2.707 12.275 1.00 28.25 O
ATOM 26 OP2 G B 4 4.737 -4.686 13.831 1.00 28.16 O
ATOM 27 O5' G B 4 3.135 -2.870 13.603 1.00 27.66 O
TER
Atoms:
C4: (2.683,-14.756,10.838)
N3: (1.687,-14.041,10.212)
OP1: (7.972,-11.239,4.974)
OP2: (9.717,-11.838,6.793)
C2: (1.819,-13.061,9.259)
C1': (3.434,-11.744,7.855)
C3': (4.971,-10.286,8.872)
O5': (7.410,-12.538,7.043)
O4': (4.727,-12.082,7.397)
C5': (7.021,-11.614,8.049)
P: (8.539,-12.178,5.966)
C4': (5.666,-11.030,7.745)
C2': (3.532,-10.311,8.391)
O2': (3.408,-9.389,7.310)
N1: (3.114,-12.785,8.888)
O4: (2.403,-15.596,11.683)
O2: (0.843,-12.497,8.792)
C6: (4.155,-13.472,9.464)
C5: (4.002,-14.417,10.396)
O3': (5.455,-8.967,9.000)
N3: (1.687,-14.041,10.212)
OP1: (7.972,-11.239,4.974)
OP2: (9.717,-11.838,6.793)
C2: (1.819,-13.061,9.259)
C1': (3.434,-11.744,7.855)
C3': (4.971,-10.286,8.872)
O5': (7.410,-12.538,7.043)
O4': (4.727,-12.082,7.397)
C5': (7.021,-11.614,8.049)
P: (8.539,-12.178,5.966)
C4': (5.666,-11.030,7.745)
C2': (3.532,-10.311,8.391)
O2': (3.408,-9.389,7.310)
N1: (3.114,-12.785,8.888)
O4: (2.403,-15.596,11.683)
O2: (0.843,-12.497,8.792)
C6: (4.155,-13.472,9.464)
C5: (4.002,-14.417,10.396)
O3': (5.455,-8.967,9.000)
OP1: (7.399,-8.104,10.199)
OP2: (5.525,-9.208,11.574)
C3': (3.139,-5.734,11.797)
C1': (1.449,-7.309,12.251)
C5': (3.932,-6.942,9.666)
O4': (2.016,-7.612,10.995)
C8: (3.069,-8.968,13.341)
O2': (0.858,-5.006,12.140)
C6: (1.237,-10.255,16.071)
C5: (1.861,-9.662,14.952)
C4: (1.103,-8.747,14.268)
P: (5.976,-8.423,10.400)
C4': (2.777,-6.469,10.514)
C2': (1.867,-5.887,12.619)
C2: (-0.632,-8.972,15.611)
N1: (-0.023,-9.877,16.374)
N3: (-0.149,-8.354,14.540)
N6: (1.816,-11.166,16.854)
N7: (3.106,-9.802,14.358)
N9: (1.885,-8.304,13.242)
O5': (5.107,-7.081,10.454)
O3': (3.548,-4.388,11.616)
OP2: (5.525,-9.208,11.574)
C3': (3.139,-5.734,11.797)
C1': (1.449,-7.309,12.251)
C5': (3.932,-6.942,9.666)
O4': (2.016,-7.612,10.995)
C8: (3.069,-8.968,13.341)
O2': (0.858,-5.006,12.140)
C6: (1.237,-10.255,16.071)
C5: (1.861,-9.662,14.952)
C4: (1.103,-8.747,14.268)
P: (5.976,-8.423,10.400)
C4': (2.777,-6.469,10.514)
C2': (1.867,-5.887,12.619)
C2: (-0.632,-8.972,15.611)
N1: (-0.023,-9.877,16.374)
N3: (-0.149,-8.354,14.540)
N6: (1.816,-11.166,16.854)
N7: (3.106,-9.802,14.358)
N9: (1.885,-8.304,13.242)
O5': (5.107,-7.081,10.454)
O3': (3.548,-4.388,11.616)
Image (generated by PyMOL):