Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1NJI:A544:A589
Extra
PDB:
ATOM 1 O3' U A 543 -2.177 117.936 86.911 1.00 46.25 O
ATOM 2 P C A 544 -2.709 116.939 88.053 1.00 46.65 P
ATOM 3 OP1 C A 544 -1.609 116.004 88.397 1.00 47.06 O
ATOM 4 OP2 C A 544 -4.027 116.392 87.631 1.00 46.31 O
ATOM 5 O5' C A 544 -2.904 117.897 89.304 1.00 44.18 O
ATOM 6 C5' C A 544 -1.773 118.539 89.895 1.00 46.92 C
ATOM 7 C4' C A 544 -2.217 119.580 90.888 1.00 48.97 C
ATOM 8 O4' C A 544 -2.981 120.612 90.212 1.00 50.10 O
ATOM 9 C3' C A 544 -3.141 119.098 91.988 1.00 49.62 C
ATOM 10 O3' C A 544 -2.401 118.456 93.013 1.00 50.66 O
ATOM 11 C2' C A 544 -3.790 120.402 92.429 1.00 49.72 C
ATOM 12 O2' C A 544 -2.895 121.198 93.177 1.00 49.53 O
ATOM 13 C1' C A 544 -4.000 121.090 91.078 1.00 50.26 C
ATOM 14 N1 C A 544 -5.316 120.802 90.459 1.00 51.75 N
ATOM 15 C2 C A 544 -6.401 121.628 90.768 1.00 52.84 C
ATOM 16 O2 C A 544 -6.235 122.566 91.569 1.00 54.35 O
ATOM 17 N3 C A 544 -7.605 121.383 90.191 1.00 52.84 N
ATOM 18 C4 C A 544 -7.746 120.357 89.347 1.00 51.83 C
ATOM 19 N4 C A 544 -8.948 120.150 88.806 1.00 51.65 N
ATOM 20 C5 C A 544 -6.660 119.496 89.021 1.00 51.91 C
ATOM 21 C6 C A 544 -5.476 119.751 89.594 1.00 51.71 C
ATOM 22 P C A 545 -3.157 117.497 94.047 1.00 53.07 P
ATOM 23 OP1 C A 545 -2.129 116.881 94.921 1.00 52.53 O
ATOM 24 OP2 C A 545 -4.075 116.620 93.269 1.00 51.70 O
ATOM 25 O5' C A 545 -4.008 118.525 94.918 1.00 54.00 O
TER
ATOM 1 O3' G B 588 -18.541 124.506 95.588 1.00 78.08 O
ATOM 2 P G B 589 -17.962 125.614 94.571 1.00 79.15 P
ATOM 3 OP1 G B 589 -18.548 126.929 94.955 1.00 79.43 O
ATOM 4 OP2 G B 589 -18.142 125.102 93.190 1.00 78.44 O
ATOM 5 O5' G B 589 -16.398 125.677 94.876 1.00 78.98 O
ATOM 6 C5' G B 589 -15.911 126.239 96.107 1.00 77.71 C
ATOM 7 C4' G B 589 -14.403 126.143 96.184 1.00 76.81 C
ATOM 8 O4' G B 589 -14.005 124.756 96.035 1.00 76.63 O
ATOM 9 C3' G B 589 -13.556 126.859 95.137 1.00 75.94 C
ATOM 10 O3' G B 589 -13.419 128.259 95.389 1.00 75.04 O
ATOM 11 C2' G B 589 -12.223 126.146 95.310 1.00 76.47 C
ATOM 12 O2' G B 589 -11.522 126.563 96.470 1.00 77.02 O
ATOM 13 C1' G B 589 -12.692 124.703 95.502 1.00 76.10 C
ATOM 14 N9 G B 589 -12.719 123.992 94.229 1.00 75.16 N
ATOM 15 C8 G B 589 -13.811 123.626 93.475 1.00 74.93 C
ATOM 16 N7 G B 589 -13.485 123.007 92.372 1.00 74.48 N
ATOM 17 C5 G B 589 -12.097 122.960 92.405 1.00 75.18 C
ATOM 18 C6 G B 589 -11.163 122.410 91.484 1.00 75.66 C
ATOM 19 O6 G B 589 -11.384 121.815 90.420 1.00 76.01 O
ATOM 20 N1 G B 589 -9.849 122.606 91.910 1.00 75.31 N
ATOM 21 C2 G B 589 -9.479 123.242 93.071 1.00 74.85 C
ATOM 22 N2 G B 589 -8.165 123.351 93.302 1.00 74.98 N
ATOM 23 N3 G B 589 -10.336 123.739 93.939 1.00 74.34 N
ATOM 24 C4 G B 589 -11.615 123.567 93.545 1.00 75.04 C
ATOM 25 P A B 590 -12.826 129.238 94.243 1.00 73.88 P
ATOM 26 OP1 A B 590 -12.871 130.623 94.787 1.00 74.36 O
ATOM 27 OP2 A B 590 -13.464 128.943 92.932 1.00 73.15 O
ATOM 28 O5' A B 590 -11.295 128.829 94.128 1.00 73.88 O
TER
ATOM 2 P C A 544 -2.709 116.939 88.053 1.00 46.65 P
ATOM 3 OP1 C A 544 -1.609 116.004 88.397 1.00 47.06 O
ATOM 4 OP2 C A 544 -4.027 116.392 87.631 1.00 46.31 O
ATOM 5 O5' C A 544 -2.904 117.897 89.304 1.00 44.18 O
ATOM 6 C5' C A 544 -1.773 118.539 89.895 1.00 46.92 C
ATOM 7 C4' C A 544 -2.217 119.580 90.888 1.00 48.97 C
ATOM 8 O4' C A 544 -2.981 120.612 90.212 1.00 50.10 O
ATOM 9 C3' C A 544 -3.141 119.098 91.988 1.00 49.62 C
ATOM 10 O3' C A 544 -2.401 118.456 93.013 1.00 50.66 O
ATOM 11 C2' C A 544 -3.790 120.402 92.429 1.00 49.72 C
ATOM 12 O2' C A 544 -2.895 121.198 93.177 1.00 49.53 O
ATOM 13 C1' C A 544 -4.000 121.090 91.078 1.00 50.26 C
ATOM 14 N1 C A 544 -5.316 120.802 90.459 1.00 51.75 N
ATOM 15 C2 C A 544 -6.401 121.628 90.768 1.00 52.84 C
ATOM 16 O2 C A 544 -6.235 122.566 91.569 1.00 54.35 O
ATOM 17 N3 C A 544 -7.605 121.383 90.191 1.00 52.84 N
ATOM 18 C4 C A 544 -7.746 120.357 89.347 1.00 51.83 C
ATOM 19 N4 C A 544 -8.948 120.150 88.806 1.00 51.65 N
ATOM 20 C5 C A 544 -6.660 119.496 89.021 1.00 51.91 C
ATOM 21 C6 C A 544 -5.476 119.751 89.594 1.00 51.71 C
ATOM 22 P C A 545 -3.157 117.497 94.047 1.00 53.07 P
ATOM 23 OP1 C A 545 -2.129 116.881 94.921 1.00 52.53 O
ATOM 24 OP2 C A 545 -4.075 116.620 93.269 1.00 51.70 O
ATOM 25 O5' C A 545 -4.008 118.525 94.918 1.00 54.00 O
TER
ATOM 1 O3' G B 588 -18.541 124.506 95.588 1.00 78.08 O
ATOM 2 P G B 589 -17.962 125.614 94.571 1.00 79.15 P
ATOM 3 OP1 G B 589 -18.548 126.929 94.955 1.00 79.43 O
ATOM 4 OP2 G B 589 -18.142 125.102 93.190 1.00 78.44 O
ATOM 5 O5' G B 589 -16.398 125.677 94.876 1.00 78.98 O
ATOM 6 C5' G B 589 -15.911 126.239 96.107 1.00 77.71 C
ATOM 7 C4' G B 589 -14.403 126.143 96.184 1.00 76.81 C
ATOM 8 O4' G B 589 -14.005 124.756 96.035 1.00 76.63 O
ATOM 9 C3' G B 589 -13.556 126.859 95.137 1.00 75.94 C
ATOM 10 O3' G B 589 -13.419 128.259 95.389 1.00 75.04 O
ATOM 11 C2' G B 589 -12.223 126.146 95.310 1.00 76.47 C
ATOM 12 O2' G B 589 -11.522 126.563 96.470 1.00 77.02 O
ATOM 13 C1' G B 589 -12.692 124.703 95.502 1.00 76.10 C
ATOM 14 N9 G B 589 -12.719 123.992 94.229 1.00 75.16 N
ATOM 15 C8 G B 589 -13.811 123.626 93.475 1.00 74.93 C
ATOM 16 N7 G B 589 -13.485 123.007 92.372 1.00 74.48 N
ATOM 17 C5 G B 589 -12.097 122.960 92.405 1.00 75.18 C
ATOM 18 C6 G B 589 -11.163 122.410 91.484 1.00 75.66 C
ATOM 19 O6 G B 589 -11.384 121.815 90.420 1.00 76.01 O
ATOM 20 N1 G B 589 -9.849 122.606 91.910 1.00 75.31 N
ATOM 21 C2 G B 589 -9.479 123.242 93.071 1.00 74.85 C
ATOM 22 N2 G B 589 -8.165 123.351 93.302 1.00 74.98 N
ATOM 23 N3 G B 589 -10.336 123.739 93.939 1.00 74.34 N
ATOM 24 C4 G B 589 -11.615 123.567 93.545 1.00 75.04 C
ATOM 25 P A B 590 -12.826 129.238 94.243 1.00 73.88 P
ATOM 26 OP1 A B 590 -12.871 130.623 94.787 1.00 74.36 O
ATOM 27 OP2 A B 590 -13.464 128.943 92.932 1.00 73.15 O
ATOM 28 O5' A B 590 -11.295 128.829 94.128 1.00 73.88 O
TER
Atoms:
C2: (-6.401,121.628,90.768)
OP1: (-1.609,116.004,88.397)
OP2: (-4.027,116.392,87.631)
C4: (-7.746,120.357,89.347)
O5': (-2.904,117.897,89.304)
C3': (-3.141,119.098,91.988)
C1': (-4.000,121.090,91.078)
O4': (-2.981,120.612,90.212)
C5': (-1.773,118.539,89.895)
P: (-2.709,116.939,88.053)
O2: (-6.235,122.566,91.569)
C4': (-2.217,119.580,90.888)
C2': (-3.790,120.402,92.429)
O2': (-2.895,121.198,93.177)
N1: (-5.316,120.802,90.459)
N3: (-7.605,121.383,90.191)
N4: (-8.948,120.150,88.806)
C6: (-5.476,119.751,89.594)
C5: (-6.660,119.496,89.021)
O3': (-2.401,118.456,93.013)
OP1: (-1.609,116.004,88.397)
OP2: (-4.027,116.392,87.631)
C4: (-7.746,120.357,89.347)
O5': (-2.904,117.897,89.304)
C3': (-3.141,119.098,91.988)
C1': (-4.000,121.090,91.078)
O4': (-2.981,120.612,90.212)
C5': (-1.773,118.539,89.895)
P: (-2.709,116.939,88.053)
O2: (-6.235,122.566,91.569)
C4': (-2.217,119.580,90.888)
C2': (-3.790,120.402,92.429)
O2': (-2.895,121.198,93.177)
N1: (-5.316,120.802,90.459)
N3: (-7.605,121.383,90.191)
N4: (-8.948,120.150,88.806)
C6: (-5.476,119.751,89.594)
C5: (-6.660,119.496,89.021)
O3': (-2.401,118.456,93.013)
OP1: (-18.548,126.929,94.955)
OP2: (-18.142,125.102,93.190)
C3': (-13.556,126.859,95.137)
C1': (-12.692,124.703,95.502)
C5': (-15.911,126.239,96.107)
O6: (-11.384,121.815,90.420)
O4': (-14.005,124.756,96.035)
C8: (-13.811,123.626,93.475)
C2: (-9.479,123.242,93.071)
C6: (-11.163,122.410,91.484)
C5: (-12.097,122.960,92.405)
C4: (-11.615,123.567,93.545)
P: (-17.962,125.614,94.571)
C4': (-14.403,126.143,96.184)
C2': (-12.223,126.146,95.310)
O2': (-11.522,126.563,96.470)
N1: (-9.849,122.606,91.910)
N2: (-8.165,123.351,93.302)
N3: (-10.336,123.739,93.939)
N7: (-13.485,123.007,92.372)
N9: (-12.719,123.992,94.229)
O5': (-16.398,125.677,94.876)
O3': (-13.419,128.259,95.389)
OP2: (-18.142,125.102,93.190)
C3': (-13.556,126.859,95.137)
C1': (-12.692,124.703,95.502)
C5': (-15.911,126.239,96.107)
O6: (-11.384,121.815,90.420)
O4': (-14.005,124.756,96.035)
C8: (-13.811,123.626,93.475)
C2: (-9.479,123.242,93.071)
C6: (-11.163,122.410,91.484)
C5: (-12.097,122.960,92.405)
C4: (-11.615,123.567,93.545)
P: (-17.962,125.614,94.571)
C4': (-14.403,126.143,96.184)
C2': (-12.223,126.146,95.310)
O2': (-11.522,126.563,96.470)
N1: (-9.849,122.606,91.910)
N2: (-8.165,123.351,93.302)
N3: (-10.336,123.739,93.939)
N7: (-13.485,123.007,92.372)
N9: (-12.719,123.992,94.229)
O5': (-16.398,125.677,94.876)
O3': (-13.419,128.259,95.389)
Image (generated by PyMOL):