Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A2278:A2279
Extra
PDB:
ATOM 1 O3' A A2277 -128.035 -34.139 35.278 1.00 0.01 O
ATOM 2 P C A2278 -128.258 -33.560 36.743 1.00 0.01 P
ATOM 3 OP1 C A2278 -128.616 -32.147 36.591 1.00 0.01 O
ATOM 4 OP2 C A2278 -127.071 -33.906 37.541 1.00 0.01 O
ATOM 5 O5' C A2278 -129.508 -34.382 37.226 1.00 0.01 O
ATOM 6 C5' C A2278 -130.646 -34.424 36.404 1.00 0.01 C
ATOM 7 C4' C A2278 -131.749 -35.233 37.009 1.00 0.01 C
ATOM 8 O4' C A2278 -131.575 -36.629 36.680 1.00 0.01 O
ATOM 9 C3' C A2278 -131.863 -35.243 38.527 1.00 0.01 C
ATOM 10 O3' C A2278 -132.446 -34.074 39.064 1.00 0.01 O
ATOM 11 C2' C A2278 -132.724 -36.460 38.723 1.00 0.01 C
ATOM 12 O2' C A2278 -134.063 -36.192 38.298 1.00 0.01 O
ATOM 13 C1' C A2278 -132.071 -37.414 37.734 1.00 0.01 C
ATOM 14 N1 C A2278 -130.953 -38.095 38.358 1.00 0.01 N
ATOM 15 C2 C A2278 -131.228 -39.345 38.894 1.00 0.01 C
ATOM 16 O2 C A2278 -132.386 -39.779 38.719 1.00 0.01 O
ATOM 17 N3 C A2278 -130.236 -40.013 39.537 1.00 0.01 N
ATOM 18 C4 C A2278 -129.042 -39.441 39.639 1.00 0.01 C
ATOM 19 N4 C A2278 -128.096 -40.120 40.265 1.00 0.01 N
ATOM 20 C5 C A2278 -128.738 -38.158 39.090 1.00 0.01 C
ATOM 21 C6 C A2278 -129.728 -37.502 38.470 1.00 0.01 C
ATOM 22 P G A2279 -132.173 -33.676 40.592 1.00 0.71 P
ATOM 23 OP1 G A2279 -132.057 -32.200 40.635 1.00 0.71 O
ATOM 24 OP2 G A2279 -131.015 -34.489 41.041 1.00 0.71 O
ATOM 25 O5' G A2279 -133.516 -34.147 41.353 1.00 0.71 O
TER
ATOM 1 O3' C B2278 -132.446 -34.074 39.064 1.00 0.01 O
ATOM 2 P G B2279 -132.173 -33.676 40.592 1.00 0.71 P
ATOM 3 OP1 G B2279 -132.057 -32.200 40.635 1.00 0.71 O
ATOM 4 OP2 G B2279 -131.015 -34.489 41.041 1.00 0.71 O
ATOM 5 O5' G B2279 -133.516 -34.147 41.353 1.00 0.71 O
ATOM 6 C5' G B2279 -133.518 -35.317 42.150 1.00 0.71 C
ATOM 7 C4' G B2279 -134.726 -35.436 43.055 1.00 0.71 C
ATOM 8 O4' G B2279 -134.529 -36.545 43.958 1.00 0.71 O
ATOM 9 C3' G B2279 -135.054 -34.233 43.933 1.00 0.71 C
ATOM 10 O3' G B2279 -136.430 -33.907 43.864 1.00 0.71 O
ATOM 11 C2' G B2279 -134.660 -34.646 45.350 1.00 0.71 C
ATOM 12 O2' G B2279 -135.783 -34.597 46.217 1.00 0.71 O
ATOM 13 C1' G B2279 -134.209 -36.097 45.219 1.00 0.71 C
ATOM 14 N9 G B2279 -132.778 -36.221 45.357 1.00 1.18 N
ATOM 15 C8 G B2279 -131.799 -35.355 44.888 1.00 1.18 C
ATOM 16 N7 G B2279 -130.569 -35.733 45.139 1.00 1.18 N
ATOM 17 C5 G B2279 -130.831 -36.911 45.807 1.00 1.18 C
ATOM 18 C6 G B2279 -129.893 -37.765 46.316 1.00 1.18 C
ATOM 19 O6 G B2279 -128.678 -37.620 46.269 1.00 1.18 O
ATOM 20 N1 G B2279 -130.520 -38.845 46.895 1.00 1.18 N
ATOM 21 C2 G B2279 -131.888 -39.064 46.957 1.00 1.18 C
ATOM 22 N2 G B2279 -132.236 -40.234 47.583 1.00 1.18 N
ATOM 23 N3 G B2279 -132.810 -38.231 46.463 1.00 1.18 N
ATOM 24 C4 G B2279 -132.165 -37.227 45.929 1.00 1.18 C
ATOM 25 P A B2280 -136.975 -32.623 43.074 1.00 4.04 P
ATOM 26 OP1 A B2280 -135.908 -31.583 43.089 1.00 4.04 O
ATOM 27 OP2 A B2280 -138.295 -32.304 43.663 1.00 4.04 O
ATOM 28 O5' A B2280 -137.170 -33.167 41.600 1.00 4.04 O
TER
ATOM 2 P C A2278 -128.258 -33.560 36.743 1.00 0.01 P
ATOM 3 OP1 C A2278 -128.616 -32.147 36.591 1.00 0.01 O
ATOM 4 OP2 C A2278 -127.071 -33.906 37.541 1.00 0.01 O
ATOM 5 O5' C A2278 -129.508 -34.382 37.226 1.00 0.01 O
ATOM 6 C5' C A2278 -130.646 -34.424 36.404 1.00 0.01 C
ATOM 7 C4' C A2278 -131.749 -35.233 37.009 1.00 0.01 C
ATOM 8 O4' C A2278 -131.575 -36.629 36.680 1.00 0.01 O
ATOM 9 C3' C A2278 -131.863 -35.243 38.527 1.00 0.01 C
ATOM 10 O3' C A2278 -132.446 -34.074 39.064 1.00 0.01 O
ATOM 11 C2' C A2278 -132.724 -36.460 38.723 1.00 0.01 C
ATOM 12 O2' C A2278 -134.063 -36.192 38.298 1.00 0.01 O
ATOM 13 C1' C A2278 -132.071 -37.414 37.734 1.00 0.01 C
ATOM 14 N1 C A2278 -130.953 -38.095 38.358 1.00 0.01 N
ATOM 15 C2 C A2278 -131.228 -39.345 38.894 1.00 0.01 C
ATOM 16 O2 C A2278 -132.386 -39.779 38.719 1.00 0.01 O
ATOM 17 N3 C A2278 -130.236 -40.013 39.537 1.00 0.01 N
ATOM 18 C4 C A2278 -129.042 -39.441 39.639 1.00 0.01 C
ATOM 19 N4 C A2278 -128.096 -40.120 40.265 1.00 0.01 N
ATOM 20 C5 C A2278 -128.738 -38.158 39.090 1.00 0.01 C
ATOM 21 C6 C A2278 -129.728 -37.502 38.470 1.00 0.01 C
ATOM 22 P G A2279 -132.173 -33.676 40.592 1.00 0.71 P
ATOM 23 OP1 G A2279 -132.057 -32.200 40.635 1.00 0.71 O
ATOM 24 OP2 G A2279 -131.015 -34.489 41.041 1.00 0.71 O
ATOM 25 O5' G A2279 -133.516 -34.147 41.353 1.00 0.71 O
TER
ATOM 1 O3' C B2278 -132.446 -34.074 39.064 1.00 0.01 O
ATOM 2 P G B2279 -132.173 -33.676 40.592 1.00 0.71 P
ATOM 3 OP1 G B2279 -132.057 -32.200 40.635 1.00 0.71 O
ATOM 4 OP2 G B2279 -131.015 -34.489 41.041 1.00 0.71 O
ATOM 5 O5' G B2279 -133.516 -34.147 41.353 1.00 0.71 O
ATOM 6 C5' G B2279 -133.518 -35.317 42.150 1.00 0.71 C
ATOM 7 C4' G B2279 -134.726 -35.436 43.055 1.00 0.71 C
ATOM 8 O4' G B2279 -134.529 -36.545 43.958 1.00 0.71 O
ATOM 9 C3' G B2279 -135.054 -34.233 43.933 1.00 0.71 C
ATOM 10 O3' G B2279 -136.430 -33.907 43.864 1.00 0.71 O
ATOM 11 C2' G B2279 -134.660 -34.646 45.350 1.00 0.71 C
ATOM 12 O2' G B2279 -135.783 -34.597 46.217 1.00 0.71 O
ATOM 13 C1' G B2279 -134.209 -36.097 45.219 1.00 0.71 C
ATOM 14 N9 G B2279 -132.778 -36.221 45.357 1.00 1.18 N
ATOM 15 C8 G B2279 -131.799 -35.355 44.888 1.00 1.18 C
ATOM 16 N7 G B2279 -130.569 -35.733 45.139 1.00 1.18 N
ATOM 17 C5 G B2279 -130.831 -36.911 45.807 1.00 1.18 C
ATOM 18 C6 G B2279 -129.893 -37.765 46.316 1.00 1.18 C
ATOM 19 O6 G B2279 -128.678 -37.620 46.269 1.00 1.18 O
ATOM 20 N1 G B2279 -130.520 -38.845 46.895 1.00 1.18 N
ATOM 21 C2 G B2279 -131.888 -39.064 46.957 1.00 1.18 C
ATOM 22 N2 G B2279 -132.236 -40.234 47.583 1.00 1.18 N
ATOM 23 N3 G B2279 -132.810 -38.231 46.463 1.00 1.18 N
ATOM 24 C4 G B2279 -132.165 -37.227 45.929 1.00 1.18 C
ATOM 25 P A B2280 -136.975 -32.623 43.074 1.00 4.04 P
ATOM 26 OP1 A B2280 -135.908 -31.583 43.089 1.00 4.04 O
ATOM 27 OP2 A B2280 -138.295 -32.304 43.663 1.00 4.04 O
ATOM 28 O5' A B2280 -137.170 -33.167 41.600 1.00 4.04 O
TER
Atoms:
C2: (-131.228,-39.345,38.894)
OP1: (-128.616,-32.147,36.591)
OP2: (-127.071,-33.906,37.541)
C4: (-129.042,-39.441,39.639)
O5': (-129.508,-34.382,37.226)
C3': (-131.863,-35.243,38.527)
C1': (-132.071,-37.414,37.734)
O4': (-131.575,-36.629,36.680)
C5': (-130.646,-34.424,36.404)
P: (-128.258,-33.560,36.743)
O2: (-132.386,-39.779,38.719)
C4': (-131.749,-35.233,37.009)
C2': (-132.724,-36.460,38.723)
O2': (-134.063,-36.192,38.298)
N1: (-130.953,-38.095,38.358)
N3: (-130.236,-40.013,39.537)
N4: (-128.096,-40.120,40.265)
C6: (-129.728,-37.502,38.470)
C5: (-128.738,-38.158,39.090)
O3': (-132.446,-34.074,39.064)
OP1: (-128.616,-32.147,36.591)
OP2: (-127.071,-33.906,37.541)
C4: (-129.042,-39.441,39.639)
O5': (-129.508,-34.382,37.226)
C3': (-131.863,-35.243,38.527)
C1': (-132.071,-37.414,37.734)
O4': (-131.575,-36.629,36.680)
C5': (-130.646,-34.424,36.404)
P: (-128.258,-33.560,36.743)
O2: (-132.386,-39.779,38.719)
C4': (-131.749,-35.233,37.009)
C2': (-132.724,-36.460,38.723)
O2': (-134.063,-36.192,38.298)
N1: (-130.953,-38.095,38.358)
N3: (-130.236,-40.013,39.537)
N4: (-128.096,-40.120,40.265)
C6: (-129.728,-37.502,38.470)
C5: (-128.738,-38.158,39.090)
O3': (-132.446,-34.074,39.064)
OP1: (-132.057,-32.200,40.635)
OP2: (-131.015,-34.489,41.041)
C3': (-135.054,-34.233,43.933)
C1': (-134.209,-36.097,45.219)
C5': (-133.518,-35.317,42.150)
O6: (-128.678,-37.620,46.269)
O4': (-134.529,-36.545,43.958)
C8: (-131.799,-35.355,44.888)
C2: (-131.888,-39.064,46.957)
C6: (-129.893,-37.765,46.316)
C5: (-130.831,-36.911,45.807)
C4: (-132.165,-37.227,45.929)
P: (-132.173,-33.676,40.592)
C4': (-134.726,-35.436,43.055)
C2': (-134.660,-34.646,45.350)
O2': (-135.783,-34.597,46.217)
N1: (-130.520,-38.845,46.895)
N2: (-132.236,-40.234,47.583)
N3: (-132.810,-38.231,46.463)
N7: (-130.569,-35.733,45.139)
N9: (-132.778,-36.221,45.357)
O5': (-133.516,-34.147,41.353)
O3': (-136.430,-33.907,43.864)
OP2: (-131.015,-34.489,41.041)
C3': (-135.054,-34.233,43.933)
C1': (-134.209,-36.097,45.219)
C5': (-133.518,-35.317,42.150)
O6: (-128.678,-37.620,46.269)
O4': (-134.529,-36.545,43.958)
C8: (-131.799,-35.355,44.888)
C2: (-131.888,-39.064,46.957)
C6: (-129.893,-37.765,46.316)
C5: (-130.831,-36.911,45.807)
C4: (-132.165,-37.227,45.929)
P: (-132.173,-33.676,40.592)
C4': (-134.726,-35.436,43.055)
C2': (-134.660,-34.646,45.350)
O2': (-135.783,-34.597,46.217)
N1: (-130.520,-38.845,46.895)
N2: (-132.236,-40.234,47.583)
N3: (-132.810,-38.231,46.463)
N7: (-130.569,-35.733,45.139)
N9: (-132.778,-36.221,45.357)
O5': (-133.516,-34.147,41.353)
O3': (-136.430,-33.907,43.864)
Image (generated by PyMOL):