Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A685:A686
Extra
PDB:
ATOM 1 O3' C A 684 57.483 60.947 37.620 1.00 64.59 O
ATOM 2 P G A 685 56.157 61.064 36.718 1.00 65.14 P
ATOM 3 OP1 G A 685 55.646 59.707 36.396 1.00 65.98 O
ATOM 4 OP2 G A 685 56.482 62.008 35.620 1.00 65.34 O
ATOM 5 O5' G A 685 55.106 61.718 37.708 1.00 64.97 O
ATOM 6 C5' G A 685 54.903 61.147 39.010 1.00 65.24 C
ATOM 7 C4' G A 685 54.009 62.043 39.822 1.00 65.12 C
ATOM 8 O4' G A 685 54.705 63.280 40.132 1.00 66.09 O
ATOM 9 C3' G A 685 52.728 62.463 39.122 1.00 64.26 C
ATOM 10 O3' G A 685 51.789 61.368 39.227 1.00 62.51 O
ATOM 11 C2' G A 685 52.398 63.777 39.835 1.00 64.88 C
ATOM 12 O2' G A 685 51.808 63.529 41.088 1.00 64.16 O
ATOM 13 C1' G A 685 53.800 64.369 40.078 1.00 65.89 C
ATOM 14 N9 G A 685 54.321 65.341 39.109 1.00 67.69 N
ATOM 15 C8 G A 685 55.294 65.111 38.153 1.00 68.01 C
ATOM 16 N7 G A 685 55.547 66.158 37.413 1.00 68.31 N
ATOM 17 C5 G A 685 54.696 67.147 37.905 1.00 68.85 C
ATOM 18 C6 G A 685 54.507 68.503 37.487 1.00 69.77 C
ATOM 19 O6 G A 685 55.058 69.114 36.557 1.00 72.13 O
ATOM 20 N1 G A 685 53.564 69.155 38.273 1.00 69.00 N
ATOM 21 C2 G A 685 52.884 68.587 39.325 1.00 68.59 C
ATOM 22 N2 G A 685 52.032 69.396 39.990 1.00 68.45 N
ATOM 23 N3 G A 685 53.030 67.320 39.709 1.00 67.90 N
ATOM 24 C4 G A 685 53.945 66.666 38.963 1.00 68.11 C
ATOM 25 P A A 686 50.243 61.560 38.829 1.00 61.09 P
ATOM 26 OP1 A A 686 49.732 60.234 38.418 1.00 62.08 O
ATOM 27 OP2 A A 686 50.079 62.706 37.913 1.00 63.18 O
ATOM 28 O5' A A 686 49.594 61.947 40.228 1.00 62.47 O
TER
ATOM 1 O3' G B 685 51.789 61.368 39.227 1.00 62.51 O
ATOM 2 P A B 686 50.243 61.560 38.829 1.00 61.09 P
ATOM 3 OP1 A B 686 49.732 60.234 38.418 1.00 62.08 O
ATOM 4 OP2 A B 686 50.079 62.706 37.913 1.00 63.18 O
ATOM 5 O5' A B 686 49.594 61.947 40.228 1.00 62.47 O
ATOM 6 C5' A B 686 48.191 61.783 40.493 1.00 63.27 C
ATOM 7 C4' A B 686 47.938 61.956 41.979 1.00 64.09 C
ATOM 8 O4' A B 686 48.303 63.301 42.386 1.00 63.85 O
ATOM 9 C3' A B 686 46.493 61.880 42.448 1.00 64.38 C
ATOM 10 O3' A B 686 46.093 60.521 42.611 1.00 64.63 O
ATOM 11 C2' A B 686 46.543 62.573 43.816 1.00 64.54 C
ATOM 12 O2' A B 686 46.833 61.680 44.867 1.00 65.44 O
ATOM 13 C1' A B 686 47.719 63.548 43.653 1.00 63.66 C
ATOM 14 N9 A B 686 47.430 64.980 43.810 1.00 62.32 N
ATOM 15 C8 A B 686 46.541 65.770 43.111 1.00 62.22 C
ATOM 16 N7 A B 686 46.531 67.028 43.495 1.00 61.36 N
ATOM 17 C5 A B 686 47.466 67.070 44.526 1.00 60.91 C
ATOM 18 C6 A B 686 47.924 68.114 45.358 1.00 59.79 C
ATOM 19 N6 A B 686 47.475 69.376 45.297 1.00 58.29 N
ATOM 20 N1 A B 686 48.876 67.811 46.272 1.00 58.79 N
ATOM 21 C2 A B 686 49.328 66.558 46.346 1.00 58.97 C
ATOM 22 N3 A B 686 48.979 65.496 45.634 1.00 60.24 N
ATOM 23 C4 A B 686 48.031 65.818 44.728 1.00 61.24 C
ATOM 24 P C B 687 44.589 60.083 42.265 1.00 64.56 P
ATOM 25 OP1 C B 687 44.502 58.606 42.422 1.00 65.32 O
ATOM 26 OP2 C B 687 44.202 60.711 40.982 1.00 65.55 O
ATOM 27 O5' C B 687 43.694 60.772 43.375 1.00 64.08 O
TER
ATOM 2 P G A 685 56.157 61.064 36.718 1.00 65.14 P
ATOM 3 OP1 G A 685 55.646 59.707 36.396 1.00 65.98 O
ATOM 4 OP2 G A 685 56.482 62.008 35.620 1.00 65.34 O
ATOM 5 O5' G A 685 55.106 61.718 37.708 1.00 64.97 O
ATOM 6 C5' G A 685 54.903 61.147 39.010 1.00 65.24 C
ATOM 7 C4' G A 685 54.009 62.043 39.822 1.00 65.12 C
ATOM 8 O4' G A 685 54.705 63.280 40.132 1.00 66.09 O
ATOM 9 C3' G A 685 52.728 62.463 39.122 1.00 64.26 C
ATOM 10 O3' G A 685 51.789 61.368 39.227 1.00 62.51 O
ATOM 11 C2' G A 685 52.398 63.777 39.835 1.00 64.88 C
ATOM 12 O2' G A 685 51.808 63.529 41.088 1.00 64.16 O
ATOM 13 C1' G A 685 53.800 64.369 40.078 1.00 65.89 C
ATOM 14 N9 G A 685 54.321 65.341 39.109 1.00 67.69 N
ATOM 15 C8 G A 685 55.294 65.111 38.153 1.00 68.01 C
ATOM 16 N7 G A 685 55.547 66.158 37.413 1.00 68.31 N
ATOM 17 C5 G A 685 54.696 67.147 37.905 1.00 68.85 C
ATOM 18 C6 G A 685 54.507 68.503 37.487 1.00 69.77 C
ATOM 19 O6 G A 685 55.058 69.114 36.557 1.00 72.13 O
ATOM 20 N1 G A 685 53.564 69.155 38.273 1.00 69.00 N
ATOM 21 C2 G A 685 52.884 68.587 39.325 1.00 68.59 C
ATOM 22 N2 G A 685 52.032 69.396 39.990 1.00 68.45 N
ATOM 23 N3 G A 685 53.030 67.320 39.709 1.00 67.90 N
ATOM 24 C4 G A 685 53.945 66.666 38.963 1.00 68.11 C
ATOM 25 P A A 686 50.243 61.560 38.829 1.00 61.09 P
ATOM 26 OP1 A A 686 49.732 60.234 38.418 1.00 62.08 O
ATOM 27 OP2 A A 686 50.079 62.706 37.913 1.00 63.18 O
ATOM 28 O5' A A 686 49.594 61.947 40.228 1.00 62.47 O
TER
ATOM 1 O3' G B 685 51.789 61.368 39.227 1.00 62.51 O
ATOM 2 P A B 686 50.243 61.560 38.829 1.00 61.09 P
ATOM 3 OP1 A B 686 49.732 60.234 38.418 1.00 62.08 O
ATOM 4 OP2 A B 686 50.079 62.706 37.913 1.00 63.18 O
ATOM 5 O5' A B 686 49.594 61.947 40.228 1.00 62.47 O
ATOM 6 C5' A B 686 48.191 61.783 40.493 1.00 63.27 C
ATOM 7 C4' A B 686 47.938 61.956 41.979 1.00 64.09 C
ATOM 8 O4' A B 686 48.303 63.301 42.386 1.00 63.85 O
ATOM 9 C3' A B 686 46.493 61.880 42.448 1.00 64.38 C
ATOM 10 O3' A B 686 46.093 60.521 42.611 1.00 64.63 O
ATOM 11 C2' A B 686 46.543 62.573 43.816 1.00 64.54 C
ATOM 12 O2' A B 686 46.833 61.680 44.867 1.00 65.44 O
ATOM 13 C1' A B 686 47.719 63.548 43.653 1.00 63.66 C
ATOM 14 N9 A B 686 47.430 64.980 43.810 1.00 62.32 N
ATOM 15 C8 A B 686 46.541 65.770 43.111 1.00 62.22 C
ATOM 16 N7 A B 686 46.531 67.028 43.495 1.00 61.36 N
ATOM 17 C5 A B 686 47.466 67.070 44.526 1.00 60.91 C
ATOM 18 C6 A B 686 47.924 68.114 45.358 1.00 59.79 C
ATOM 19 N6 A B 686 47.475 69.376 45.297 1.00 58.29 N
ATOM 20 N1 A B 686 48.876 67.811 46.272 1.00 58.79 N
ATOM 21 C2 A B 686 49.328 66.558 46.346 1.00 58.97 C
ATOM 22 N3 A B 686 48.979 65.496 45.634 1.00 60.24 N
ATOM 23 C4 A B 686 48.031 65.818 44.728 1.00 61.24 C
ATOM 24 P C B 687 44.589 60.083 42.265 1.00 64.56 P
ATOM 25 OP1 C B 687 44.502 58.606 42.422 1.00 65.32 O
ATOM 26 OP2 C B 687 44.202 60.711 40.982 1.00 65.55 O
ATOM 27 O5' C B 687 43.694 60.772 43.375 1.00 64.08 O
TER
Atoms:
OP1: (55.646,59.707,36.396)
OP2: (56.482,62.008,35.620)
C3': (52.728,62.463,39.122)
C1': (53.800,64.369,40.078)
C5': (54.903,61.147,39.010)
O6: (55.058,69.114,36.557)
O4': (54.705,63.280,40.132)
C8: (55.294,65.111,38.153)
C2: (52.884,68.587,39.325)
C6: (54.507,68.503,37.487)
C5: (54.696,67.147,37.905)
C4: (53.945,66.666,38.963)
P: (56.157,61.064,36.718)
C4': (54.009,62.043,39.822)
C2': (52.398,63.777,39.835)
O2': (51.808,63.529,41.088)
N1: (53.564,69.155,38.273)
N2: (52.032,69.396,39.990)
N3: (53.030,67.320,39.709)
N7: (55.547,66.158,37.413)
N9: (54.321,65.341,39.109)
O5': (55.106,61.718,37.708)
O3': (51.789,61.368,39.227)
OP2: (56.482,62.008,35.620)
C3': (52.728,62.463,39.122)
C1': (53.800,64.369,40.078)
C5': (54.903,61.147,39.010)
O6: (55.058,69.114,36.557)
O4': (54.705,63.280,40.132)
C8: (55.294,65.111,38.153)
C2: (52.884,68.587,39.325)
C6: (54.507,68.503,37.487)
C5: (54.696,67.147,37.905)
C4: (53.945,66.666,38.963)
P: (56.157,61.064,36.718)
C4': (54.009,62.043,39.822)
C2': (52.398,63.777,39.835)
O2': (51.808,63.529,41.088)
N1: (53.564,69.155,38.273)
N2: (52.032,69.396,39.990)
N3: (53.030,67.320,39.709)
N7: (55.547,66.158,37.413)
N9: (54.321,65.341,39.109)
O5': (55.106,61.718,37.708)
O3': (51.789,61.368,39.227)
OP1: (49.732,60.234,38.418)
OP2: (50.079,62.706,37.913)
C3': (46.493,61.880,42.448)
C1': (47.719,63.548,43.653)
C5': (48.191,61.783,40.493)
O4': (48.303,63.301,42.386)
C8: (46.541,65.770,43.111)
O2': (46.833,61.680,44.867)
C6: (47.924,68.114,45.358)
C5: (47.466,67.070,44.526)
C4: (48.031,65.818,44.728)
P: (50.243,61.560,38.829)
C4': (47.938,61.956,41.979)
C2': (46.543,62.573,43.816)
C2: (49.328,66.558,46.346)
N1: (48.876,67.811,46.272)
N3: (48.979,65.496,45.634)
N6: (47.475,69.376,45.297)
N7: (46.531,67.028,43.495)
N9: (47.430,64.980,43.810)
O5': (49.594,61.947,40.228)
O3': (46.093,60.521,42.611)
OP2: (50.079,62.706,37.913)
C3': (46.493,61.880,42.448)
C1': (47.719,63.548,43.653)
C5': (48.191,61.783,40.493)
O4': (48.303,63.301,42.386)
C8: (46.541,65.770,43.111)
O2': (46.833,61.680,44.867)
C6: (47.924,68.114,45.358)
C5: (47.466,67.070,44.526)
C4: (48.031,65.818,44.728)
P: (50.243,61.560,38.829)
C4': (47.938,61.956,41.979)
C2': (46.543,62.573,43.816)
C2: (49.328,66.558,46.346)
N1: (48.876,67.811,46.272)
N3: (48.979,65.496,45.634)
N6: (47.475,69.376,45.297)
N7: (46.531,67.028,43.495)
N9: (47.430,64.980,43.810)
O5': (49.594,61.947,40.228)
O3': (46.093,60.521,42.611)
Image (generated by PyMOL):