Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D0X:A128:A118
Extra
PDB:
ATOM 1 O3' C A 127 12.255 35.330 12.204 1.00 45.35 O
ATOM 2 P C A 128 12.416 36.542 13.235 1.00 43.45 P
ATOM 3 OP1 C A 128 13.799 37.041 13.084 1.00 53.14 O
ATOM 4 OP2 C A 128 11.925 36.123 14.565 1.00 38.50 O
ATOM 5 O5' C A 128 11.413 37.644 12.660 1.00 41.74 O
ATOM 6 C5' C A 128 11.732 38.298 11.441 1.00 47.02 C
ATOM 7 C4' C A 128 10.700 39.357 11.099 1.00 48.69 C
ATOM 8 O4' C A 128 9.436 38.726 10.768 1.00 50.82 O
ATOM 9 C3' C A 128 10.344 40.309 12.228 1.00 48.39 C
ATOM 10 O3' C A 128 11.322 41.332 12.358 1.00 48.50 O
ATOM 11 C2' C A 128 9.030 40.850 11.688 1.00 49.34 C
ATOM 12 O2' C A 128 9.236 41.725 10.600 1.00 54.46 O
ATOM 13 C1' C A 128 8.376 39.563 11.195 1.00 51.24 C
ATOM 14 N1 C A 128 7.590 38.854 12.245 1.00 49.74 N
ATOM 15 C2 C A 128 6.320 39.320 12.594 1.00 52.24 C
ATOM 16 O2 C A 128 5.869 40.317 12.022 1.00 56.11 O
ATOM 17 N3 C A 128 5.619 38.667 13.549 1.00 50.39 N
ATOM 18 C4 C A 128 6.144 37.596 14.140 1.00 52.22 C
ATOM 19 N4 C A 128 5.422 36.978 15.077 1.00 61.41 N
ATOM 20 C5 C A 128 7.435 37.106 13.799 1.00 48.94 C
ATOM 21 C6 C A 128 8.116 37.758 12.856 1.00 48.67 C
ATOM 22 P U A 129 11.717 41.889 13.806 1.00 45.19 P
ATOM 23 OP1 U A 129 12.951 42.685 13.648 1.00 45.49 O
ATOM 24 OP2 U A 129 11.679 40.773 14.773 1.00 45.51 O
ATOM 25 O5' U A 129 10.498 42.861 14.159 1.00 50.25 O
TER
ATOM 1 O3' A B 117 -5.291 40.828 17.694 1.00 73.43 O
ATOM 2 P G B 118 -5.373 39.893 16.401 1.00 84.36 P
ATOM 3 OP1 G B 118 -6.772 39.914 15.916 1.00 87.36 O
ATOM 4 OP2 G B 118 -4.718 38.608 16.741 1.00 70.45 O
ATOM 5 O5' G B 118 -4.454 40.656 15.338 1.00 68.69 O
ATOM 6 C5' G B 118 -4.800 41.962 14.904 1.00 65.25 C
ATOM 7 C4' G B 118 -3.643 42.594 14.154 1.00 70.63 C
ATOM 8 O4' G B 118 -2.490 42.700 15.029 1.00 73.82 O
ATOM 9 C3' G B 118 -3.110 41.786 12.982 1.00 69.78 C
ATOM 10 O3' G B 118 -3.917 41.929 11.826 1.00 64.29 O
ATOM 11 C2' G B 118 -1.744 42.438 12.814 1.00 69.43 C
ATOM 12 O2' G B 118 -1.820 43.743 12.276 1.00 71.87 O
ATOM 13 C1' G B 118 -1.309 42.484 14.273 1.00 68.72 C
ATOM 14 N9 G B 118 -0.681 41.228 14.676 1.00 69.28 N
ATOM 15 C8 G B 118 -1.229 40.199 15.406 1.00 70.52 C
ATOM 16 N7 G B 118 -0.412 39.197 15.592 1.00 65.98 N
ATOM 17 C5 G B 118 0.751 39.586 14.937 1.00 69.32 C
ATOM 18 C6 G B 118 1.989 38.914 14.793 1.00 66.04 C
ATOM 19 O6 G B 118 2.313 37.801 15.230 1.00 65.60 O
ATOM 20 N1 G B 118 2.902 39.666 14.054 1.00 60.62 N
ATOM 21 C2 G B 118 2.646 40.909 13.524 1.00 61.21 C
ATOM 22 N2 G B 118 3.644 41.483 12.840 1.00 63.49 N
ATOM 23 N3 G B 118 1.494 41.551 13.651 1.00 60.33 N
ATOM 24 C4 G B 118 0.598 40.831 14.367 1.00 67.15 C
ATOM 25 P G B 119 -4.023 40.689 10.820 1.00 75.91 P
ATOM 26 OP1 G B 119 -5.067 41.015 9.823 1.00 71.85 O
ATOM 27 OP2 G B 119 -4.119 39.448 11.626 1.00 61.95 O
ATOM 28 O5' G B 119 -2.599 40.690 10.091 1.00 65.01 O
TER
ATOM 2 P C A 128 12.416 36.542 13.235 1.00 43.45 P
ATOM 3 OP1 C A 128 13.799 37.041 13.084 1.00 53.14 O
ATOM 4 OP2 C A 128 11.925 36.123 14.565 1.00 38.50 O
ATOM 5 O5' C A 128 11.413 37.644 12.660 1.00 41.74 O
ATOM 6 C5' C A 128 11.732 38.298 11.441 1.00 47.02 C
ATOM 7 C4' C A 128 10.700 39.357 11.099 1.00 48.69 C
ATOM 8 O4' C A 128 9.436 38.726 10.768 1.00 50.82 O
ATOM 9 C3' C A 128 10.344 40.309 12.228 1.00 48.39 C
ATOM 10 O3' C A 128 11.322 41.332 12.358 1.00 48.50 O
ATOM 11 C2' C A 128 9.030 40.850 11.688 1.00 49.34 C
ATOM 12 O2' C A 128 9.236 41.725 10.600 1.00 54.46 O
ATOM 13 C1' C A 128 8.376 39.563 11.195 1.00 51.24 C
ATOM 14 N1 C A 128 7.590 38.854 12.245 1.00 49.74 N
ATOM 15 C2 C A 128 6.320 39.320 12.594 1.00 52.24 C
ATOM 16 O2 C A 128 5.869 40.317 12.022 1.00 56.11 O
ATOM 17 N3 C A 128 5.619 38.667 13.549 1.00 50.39 N
ATOM 18 C4 C A 128 6.144 37.596 14.140 1.00 52.22 C
ATOM 19 N4 C A 128 5.422 36.978 15.077 1.00 61.41 N
ATOM 20 C5 C A 128 7.435 37.106 13.799 1.00 48.94 C
ATOM 21 C6 C A 128 8.116 37.758 12.856 1.00 48.67 C
ATOM 22 P U A 129 11.717 41.889 13.806 1.00 45.19 P
ATOM 23 OP1 U A 129 12.951 42.685 13.648 1.00 45.49 O
ATOM 24 OP2 U A 129 11.679 40.773 14.773 1.00 45.51 O
ATOM 25 O5' U A 129 10.498 42.861 14.159 1.00 50.25 O
TER
ATOM 1 O3' A B 117 -5.291 40.828 17.694 1.00 73.43 O
ATOM 2 P G B 118 -5.373 39.893 16.401 1.00 84.36 P
ATOM 3 OP1 G B 118 -6.772 39.914 15.916 1.00 87.36 O
ATOM 4 OP2 G B 118 -4.718 38.608 16.741 1.00 70.45 O
ATOM 5 O5' G B 118 -4.454 40.656 15.338 1.00 68.69 O
ATOM 6 C5' G B 118 -4.800 41.962 14.904 1.00 65.25 C
ATOM 7 C4' G B 118 -3.643 42.594 14.154 1.00 70.63 C
ATOM 8 O4' G B 118 -2.490 42.700 15.029 1.00 73.82 O
ATOM 9 C3' G B 118 -3.110 41.786 12.982 1.00 69.78 C
ATOM 10 O3' G B 118 -3.917 41.929 11.826 1.00 64.29 O
ATOM 11 C2' G B 118 -1.744 42.438 12.814 1.00 69.43 C
ATOM 12 O2' G B 118 -1.820 43.743 12.276 1.00 71.87 O
ATOM 13 C1' G B 118 -1.309 42.484 14.273 1.00 68.72 C
ATOM 14 N9 G B 118 -0.681 41.228 14.676 1.00 69.28 N
ATOM 15 C8 G B 118 -1.229 40.199 15.406 1.00 70.52 C
ATOM 16 N7 G B 118 -0.412 39.197 15.592 1.00 65.98 N
ATOM 17 C5 G B 118 0.751 39.586 14.937 1.00 69.32 C
ATOM 18 C6 G B 118 1.989 38.914 14.793 1.00 66.04 C
ATOM 19 O6 G B 118 2.313 37.801 15.230 1.00 65.60 O
ATOM 20 N1 G B 118 2.902 39.666 14.054 1.00 60.62 N
ATOM 21 C2 G B 118 2.646 40.909 13.524 1.00 61.21 C
ATOM 22 N2 G B 118 3.644 41.483 12.840 1.00 63.49 N
ATOM 23 N3 G B 118 1.494 41.551 13.651 1.00 60.33 N
ATOM 24 C4 G B 118 0.598 40.831 14.367 1.00 67.15 C
ATOM 25 P G B 119 -4.023 40.689 10.820 1.00 75.91 P
ATOM 26 OP1 G B 119 -5.067 41.015 9.823 1.00 71.85 O
ATOM 27 OP2 G B 119 -4.119 39.448 11.626 1.00 61.95 O
ATOM 28 O5' G B 119 -2.599 40.690 10.091 1.00 65.01 O
TER
Atoms:
C2: (6.320,39.320,12.594)
OP1: (13.799,37.041,13.084)
OP2: (11.925,36.123,14.565)
C4: (6.144,37.596,14.140)
O5': (11.413,37.644,12.660)
C3': (10.344,40.309,12.228)
C1': (8.376,39.563,11.195)
O4': (9.436,38.726,10.768)
C5': (11.732,38.298,11.441)
P: (12.416,36.542,13.235)
O2: (5.869,40.317,12.022)
C4': (10.700,39.357,11.099)
C2': (9.030,40.850,11.688)
O2': (9.236,41.725,10.600)
N1: (7.590,38.854,12.245)
N3: (5.619,38.667,13.549)
N4: (5.422,36.978,15.077)
C6: (8.116,37.758,12.856)
C5: (7.435,37.106,13.799)
O3': (11.322,41.332,12.358)
OP1: (13.799,37.041,13.084)
OP2: (11.925,36.123,14.565)
C4: (6.144,37.596,14.140)
O5': (11.413,37.644,12.660)
C3': (10.344,40.309,12.228)
C1': (8.376,39.563,11.195)
O4': (9.436,38.726,10.768)
C5': (11.732,38.298,11.441)
P: (12.416,36.542,13.235)
O2: (5.869,40.317,12.022)
C4': (10.700,39.357,11.099)
C2': (9.030,40.850,11.688)
O2': (9.236,41.725,10.600)
N1: (7.590,38.854,12.245)
N3: (5.619,38.667,13.549)
N4: (5.422,36.978,15.077)
C6: (8.116,37.758,12.856)
C5: (7.435,37.106,13.799)
O3': (11.322,41.332,12.358)
OP1: (-6.772,39.914,15.916)
OP2: (-4.718,38.608,16.741)
C3': (-3.110,41.786,12.982)
C1': (-1.309,42.484,14.273)
C5': (-4.800,41.962,14.904)
O6: (2.313,37.801,15.230)
O4': (-2.490,42.700,15.029)
C8: (-1.229,40.199,15.406)
C2: (2.646,40.909,13.524)
C6: (1.989,38.914,14.793)
C5: (0.751,39.586,14.937)
C4: (0.598,40.831,14.367)
P: (-5.373,39.893,16.401)
C4': (-3.643,42.594,14.154)
C2': (-1.744,42.438,12.814)
O2': (-1.820,43.743,12.276)
N1: (2.902,39.666,14.054)
N2: (3.644,41.483,12.840)
N3: (1.494,41.551,13.651)
N7: (-0.412,39.197,15.592)
N9: (-0.681,41.228,14.676)
O5': (-4.454,40.656,15.338)
O3': (-3.917,41.929,11.826)
OP2: (-4.718,38.608,16.741)
C3': (-3.110,41.786,12.982)
C1': (-1.309,42.484,14.273)
C5': (-4.800,41.962,14.904)
O6: (2.313,37.801,15.230)
O4': (-2.490,42.700,15.029)
C8: (-1.229,40.199,15.406)
C2: (2.646,40.909,13.524)
C6: (1.989,38.914,14.793)
C5: (0.751,39.586,14.937)
C4: (0.598,40.831,14.367)
P: (-5.373,39.893,16.401)
C4': (-3.643,42.594,14.154)
C2': (-1.744,42.438,12.814)
O2': (-1.820,43.743,12.276)
N1: (2.902,39.666,14.054)
N2: (3.644,41.483,12.840)
N3: (1.494,41.551,13.651)
N7: (-0.412,39.197,15.592)
N9: (-0.681,41.228,14.676)
O5': (-4.454,40.656,15.338)
O3': (-3.917,41.929,11.826)
Image (generated by PyMOL):