Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J00:A1225:A1226
Extra
PDB:
ATOM 1 O3' A A1224 -112.197 128.954 54.849 1.00 47.10 O
ATOM 2 P C A1225 -111.771 127.532 54.219 1.00 83.38 P
ATOM 3 OP1 C A1225 -112.759 127.242 53.149 1.00 55.14 O
ATOM 4 OP2 C A1225 -111.570 126.549 55.312 1.00 52.01 O
ATOM 5 O5' C A1225 -110.359 127.804 53.527 1.00 77.74 O
ATOM 6 C5' C A1225 -109.345 128.544 54.211 1.00 78.08 C
ATOM 7 C4' C A1225 -107.965 128.145 53.743 1.00 78.18 C
ATOM 8 O4' C A1225 -107.046 128.782 54.666 1.00 78.76 O
ATOM 9 C3' C A1225 -107.641 126.654 53.819 1.00 77.65 C
ATOM 10 O3' C A1225 -107.829 125.982 52.585 1.00 76.08 O
ATOM 11 C2' C A1225 -106.177 126.627 54.233 1.00 77.91 C
ATOM 12 O2' C A1225 -105.268 126.759 53.160 1.00 77.25 O
ATOM 13 C1' C A1225 -106.118 127.835 55.164 1.00 77.93 C
ATOM 14 N1 C A1225 -106.555 127.446 56.517 1.00 37.05 N
ATOM 15 C2 C A1225 -105.594 127.047 57.446 1.00 36.67 C
ATOM 16 O2 C A1225 -104.385 127.061 57.112 1.00 37.06 O
ATOM 17 N3 C A1225 -106.006 126.651 58.678 1.00 36.26 N
ATOM 18 C4 C A1225 -107.313 126.640 58.979 1.00 35.95 C
ATOM 19 N4 C A1225 -107.683 126.223 60.190 1.00 35.57 N
ATOM 20 C5 C A1225 -108.301 127.053 58.051 1.00 36.28 C
ATOM 21 C6 C A1225 -107.886 127.450 56.851 1.00 36.53 C
ATOM 22 P A A1226 -107.963 124.380 52.566 1.00 72.65 P
ATOM 23 OP1 A A1226 -107.545 123.944 51.208 1.00 60.23 O
ATOM 24 OP2 A A1226 -109.307 123.995 53.090 1.00 58.13 O
ATOM 25 O5' A A1226 -106.874 123.867 53.611 1.00 77.03 O
TER
ATOM 1 O3' C B1225 -107.829 125.982 52.585 1.00 76.08 O
ATOM 2 P A B1226 -107.963 124.380 52.566 1.00 72.65 P
ATOM 3 OP1 A B1226 -107.545 123.944 51.208 1.00 60.23 O
ATOM 4 OP2 A B1226 -109.307 123.995 53.090 1.00 58.13 O
ATOM 5 O5' A B1226 -106.874 123.867 53.611 1.00 77.03 O
ATOM 6 C5' A B1226 -106.607 122.461 53.750 1.00 75.15 C
ATOM 7 C4' A B1226 -105.158 122.234 54.104 1.00 73.15 C
ATOM 8 O4' A B1226 -104.943 122.547 55.501 1.00 71.72 O
ATOM 9 C3' A B1226 -104.685 120.798 53.957 1.00 72.68 C
ATOM 10 O3' A B1226 -104.278 120.572 52.612 1.00 73.04 O
ATOM 11 C2' A B1226 -103.512 120.729 54.928 1.00 71.57 C
ATOM 12 O2' A B1226 -102.316 121.246 54.382 1.00 72.48 O
ATOM 13 C1' A B1226 -103.974 121.667 56.042 1.00 69.93 C
ATOM 14 N9 A B1226 -104.554 120.969 57.191 1.00 31.74 N
ATOM 15 C8 A B1226 -105.881 120.851 57.540 1.00 30.55 C
ATOM 16 N7 A B1226 -106.080 120.172 58.645 1.00 29.61 N
ATOM 17 C5 A B1226 -104.800 119.813 59.051 1.00 29.62 C
ATOM 18 C6 A B1226 -104.330 119.072 60.152 1.00 29.14 C
ATOM 19 N6 A B1226 -105.128 118.534 61.084 1.00 29.06 N
ATOM 20 N1 A B1226 -102.994 118.896 60.259 1.00 28.92 N
ATOM 21 C2 A B1226 -102.195 119.423 59.315 1.00 30.08 C
ATOM 22 N3 A B1226 -102.518 120.129 58.236 1.00 30.15 N
ATOM 23 C4 A B1226 -103.851 120.293 58.161 1.00 30.76 C
ATOM 24 P A B1227 -104.494 119.130 51.932 1.00100.11 P
ATOM 25 OP1 A B1227 -104.139 119.326 50.499 1.00 20.27 O
ATOM 26 OP2 A B1227 -105.823 118.570 52.294 1.00 21.48 O
ATOM 27 O5' A B1227 -103.389 118.209 52.611 1.00 92.36 O
TER
ATOM 2 P C A1225 -111.771 127.532 54.219 1.00 83.38 P
ATOM 3 OP1 C A1225 -112.759 127.242 53.149 1.00 55.14 O
ATOM 4 OP2 C A1225 -111.570 126.549 55.312 1.00 52.01 O
ATOM 5 O5' C A1225 -110.359 127.804 53.527 1.00 77.74 O
ATOM 6 C5' C A1225 -109.345 128.544 54.211 1.00 78.08 C
ATOM 7 C4' C A1225 -107.965 128.145 53.743 1.00 78.18 C
ATOM 8 O4' C A1225 -107.046 128.782 54.666 1.00 78.76 O
ATOM 9 C3' C A1225 -107.641 126.654 53.819 1.00 77.65 C
ATOM 10 O3' C A1225 -107.829 125.982 52.585 1.00 76.08 O
ATOM 11 C2' C A1225 -106.177 126.627 54.233 1.00 77.91 C
ATOM 12 O2' C A1225 -105.268 126.759 53.160 1.00 77.25 O
ATOM 13 C1' C A1225 -106.118 127.835 55.164 1.00 77.93 C
ATOM 14 N1 C A1225 -106.555 127.446 56.517 1.00 37.05 N
ATOM 15 C2 C A1225 -105.594 127.047 57.446 1.00 36.67 C
ATOM 16 O2 C A1225 -104.385 127.061 57.112 1.00 37.06 O
ATOM 17 N3 C A1225 -106.006 126.651 58.678 1.00 36.26 N
ATOM 18 C4 C A1225 -107.313 126.640 58.979 1.00 35.95 C
ATOM 19 N4 C A1225 -107.683 126.223 60.190 1.00 35.57 N
ATOM 20 C5 C A1225 -108.301 127.053 58.051 1.00 36.28 C
ATOM 21 C6 C A1225 -107.886 127.450 56.851 1.00 36.53 C
ATOM 22 P A A1226 -107.963 124.380 52.566 1.00 72.65 P
ATOM 23 OP1 A A1226 -107.545 123.944 51.208 1.00 60.23 O
ATOM 24 OP2 A A1226 -109.307 123.995 53.090 1.00 58.13 O
ATOM 25 O5' A A1226 -106.874 123.867 53.611 1.00 77.03 O
TER
ATOM 1 O3' C B1225 -107.829 125.982 52.585 1.00 76.08 O
ATOM 2 P A B1226 -107.963 124.380 52.566 1.00 72.65 P
ATOM 3 OP1 A B1226 -107.545 123.944 51.208 1.00 60.23 O
ATOM 4 OP2 A B1226 -109.307 123.995 53.090 1.00 58.13 O
ATOM 5 O5' A B1226 -106.874 123.867 53.611 1.00 77.03 O
ATOM 6 C5' A B1226 -106.607 122.461 53.750 1.00 75.15 C
ATOM 7 C4' A B1226 -105.158 122.234 54.104 1.00 73.15 C
ATOM 8 O4' A B1226 -104.943 122.547 55.501 1.00 71.72 O
ATOM 9 C3' A B1226 -104.685 120.798 53.957 1.00 72.68 C
ATOM 10 O3' A B1226 -104.278 120.572 52.612 1.00 73.04 O
ATOM 11 C2' A B1226 -103.512 120.729 54.928 1.00 71.57 C
ATOM 12 O2' A B1226 -102.316 121.246 54.382 1.00 72.48 O
ATOM 13 C1' A B1226 -103.974 121.667 56.042 1.00 69.93 C
ATOM 14 N9 A B1226 -104.554 120.969 57.191 1.00 31.74 N
ATOM 15 C8 A B1226 -105.881 120.851 57.540 1.00 30.55 C
ATOM 16 N7 A B1226 -106.080 120.172 58.645 1.00 29.61 N
ATOM 17 C5 A B1226 -104.800 119.813 59.051 1.00 29.62 C
ATOM 18 C6 A B1226 -104.330 119.072 60.152 1.00 29.14 C
ATOM 19 N6 A B1226 -105.128 118.534 61.084 1.00 29.06 N
ATOM 20 N1 A B1226 -102.994 118.896 60.259 1.00 28.92 N
ATOM 21 C2 A B1226 -102.195 119.423 59.315 1.00 30.08 C
ATOM 22 N3 A B1226 -102.518 120.129 58.236 1.00 30.15 N
ATOM 23 C4 A B1226 -103.851 120.293 58.161 1.00 30.76 C
ATOM 24 P A B1227 -104.494 119.130 51.932 1.00100.11 P
ATOM 25 OP1 A B1227 -104.139 119.326 50.499 1.00 20.27 O
ATOM 26 OP2 A B1227 -105.823 118.570 52.294 1.00 21.48 O
ATOM 27 O5' A B1227 -103.389 118.209 52.611 1.00 92.36 O
TER
Atoms:
C2: (-105.594,127.047,57.446)
OP1: (-112.759,127.242,53.149)
OP2: (-111.570,126.549,55.312)
C4: (-107.313,126.640,58.979)
O5': (-110.359,127.804,53.527)
C3': (-107.641,126.654,53.819)
C1': (-106.118,127.835,55.164)
O4': (-107.046,128.782,54.666)
C5': (-109.345,128.544,54.211)
P: (-111.771,127.532,54.219)
O2: (-104.385,127.061,57.112)
C4': (-107.965,128.145,53.743)
C2': (-106.177,126.627,54.233)
O2': (-105.268,126.759,53.160)
N1: (-106.555,127.446,56.517)
N3: (-106.006,126.651,58.678)
N4: (-107.683,126.223,60.190)
C6: (-107.886,127.450,56.851)
C5: (-108.301,127.053,58.051)
O3': (-107.829,125.982,52.585)
OP1: (-112.759,127.242,53.149)
OP2: (-111.570,126.549,55.312)
C4: (-107.313,126.640,58.979)
O5': (-110.359,127.804,53.527)
C3': (-107.641,126.654,53.819)
C1': (-106.118,127.835,55.164)
O4': (-107.046,128.782,54.666)
C5': (-109.345,128.544,54.211)
P: (-111.771,127.532,54.219)
O2: (-104.385,127.061,57.112)
C4': (-107.965,128.145,53.743)
C2': (-106.177,126.627,54.233)
O2': (-105.268,126.759,53.160)
N1: (-106.555,127.446,56.517)
N3: (-106.006,126.651,58.678)
N4: (-107.683,126.223,60.190)
C6: (-107.886,127.450,56.851)
C5: (-108.301,127.053,58.051)
O3': (-107.829,125.982,52.585)
OP1: (-107.545,123.944,51.208)
OP2: (-109.307,123.995,53.090)
C3': (-104.685,120.798,53.957)
C1': (-103.974,121.667,56.042)
C5': (-106.607,122.461,53.750)
O4': (-104.943,122.547,55.501)
C8: (-105.881,120.851,57.540)
O2': (-102.316,121.246,54.382)
C6: (-104.330,119.072,60.152)
C5: (-104.800,119.813,59.051)
C4: (-103.851,120.293,58.161)
P: (-107.963,124.380,52.566)
C4': (-105.158,122.234,54.104)
C2': (-103.512,120.729,54.928)
C2: (-102.195,119.423,59.315)
N1: (-102.994,118.896,60.259)
N3: (-102.518,120.129,58.236)
N6: (-105.128,118.534,61.084)
N7: (-106.080,120.172,58.645)
N9: (-104.554,120.969,57.191)
O5': (-106.874,123.867,53.611)
O3': (-104.278,120.572,52.612)
OP2: (-109.307,123.995,53.090)
C3': (-104.685,120.798,53.957)
C1': (-103.974,121.667,56.042)
C5': (-106.607,122.461,53.750)
O4': (-104.943,122.547,55.501)
C8: (-105.881,120.851,57.540)
O2': (-102.316,121.246,54.382)
C6: (-104.330,119.072,60.152)
C5: (-104.800,119.813,59.051)
C4: (-103.851,120.293,58.161)
P: (-107.963,124.380,52.566)
C4': (-105.158,122.234,54.104)
C2': (-103.512,120.729,54.928)
C2: (-102.195,119.423,59.315)
N1: (-102.994,118.896,60.259)
N3: (-102.518,120.129,58.236)
N6: (-105.128,118.534,61.084)
N7: (-106.080,120.172,58.645)
N9: (-104.554,120.969,57.191)
O5': (-106.874,123.867,53.611)
O3': (-104.278,120.572,52.612)
Image (generated by PyMOL):