ClaRNA

Doublet info:

Details

Nucleotide types: CA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3KNH:A1216:A1217

Extra

PDB:
ATOM 1 O3' A A1215 164.282 58.327 -17.117 1.00101.26 O
ATOM 2 P C A1216 164.080 58.905 -15.633 1.00115.98 P
ATOM 3 OP1 C A1216 164.907 60.133 -15.540 1.00115.40 O
ATOM 4 OP2 C A1216 164.313 57.787 -14.678 1.00102.99 O
ATOM 5 O5' C A1216 162.542 59.328 -15.569 1.00104.25 O
ATOM 6 C5' C A1216 161.567 58.556 -16.253 1.00102.14 C
ATOM 7 C4' C A1216 160.189 58.794 -15.704 1.00 98.69 C
ATOM 8 O4' C A1216 159.371 57.715 -16.218 1.00 97.97 O
ATOM 9 C3' C A1216 160.087 58.703 -14.190 1.00 98.51 C
ATOM 10 O3' C A1216 160.203 60.021 -13.643 1.00100.88 O
ATOM 11 C2' C A1216 158.706 58.094 -13.964 1.00 99.97 C
ATOM 12 O2' C A1216 157.674 59.053 -13.934 1.00104.47 O
ATOM 13 C1' C A1216 158.542 57.202 -15.195 1.00 99.14 C
ATOM 14 N1 C A1216 158.915 55.793 -14.957 1.00104.02 N
ATOM 15 C2 C A1216 157.927 54.873 -14.533 1.00102.57 C
ATOM 16 O2 C A1216 156.760 55.261 -14.374 1.00 99.29 O
ATOM 17 N3 C A1216 158.279 53.587 -14.309 1.00103.83 N
ATOM 18 C4 C A1216 159.545 53.201 -14.490 1.00102.04 C
ATOM 19 N4 C A1216 159.850 51.922 -14.261 1.00 99.98 N
ATOM 20 C5 C A1216 160.559 54.108 -14.918 1.00102.65 C
ATOM 21 C6 C A1216 160.204 55.378 -15.139 1.00105.29 C
ATOM 22 P A A1217 160.174 60.251 -12.046 1.00102.26 P
ATOM 23 OP1 A A1217 159.541 61.567 -11.763 1.00 97.94 O
ATOM 24 OP2 A A1217 161.548 59.979 -11.547 1.00 98.57 O
ATOM 25 O5' A A1217 159.184 59.117 -11.500 1.00109.83 O
TER

ATOM 1 O3' C B1216 160.203 60.021 -13.643 1.00100.88 O
ATOM 2 P A B1217 160.174 60.251 -12.046 1.00102.26 P
ATOM 3 OP1 A B1217 159.541 61.567 -11.763 1.00 97.94 O
ATOM 4 OP2 A B1217 161.548 59.979 -11.547 1.00 98.57 O
ATOM 5 O5' A B1217 159.184 59.117 -11.500 1.00109.83 O
ATOM 6 C5' A B1217 158.747 59.102 -10.138 1.00107.44 C
ATOM 7 C4' A B1217 157.348 58.513 -10.021 1.00103.99 C
ATOM 8 O4' A B1217 157.367 57.079 -10.288 1.00106.58 O
ATOM 9 C3' A B1217 156.755 58.616 -8.623 1.00103.01 C
ATOM 10 O3' A B1217 156.153 59.883 -8.424 1.00 98.76 O
ATOM 11 C2' A B1217 155.742 57.479 -8.583 1.00100.62 C
ATOM 12 O2' A B1217 154.510 57.837 -9.177 1.00 95.29 O
ATOM 13 C1' A B1217 156.434 56.416 -9.437 1.00105.33 C
ATOM 14 N9 A B1217 157.129 55.368 -8.666 1.00101.43 N
ATOM 15 C8 A B1217 158.481 55.144 -8.550 1.00 99.78 C
ATOM 16 N7 A B1217 158.783 54.090 -7.830 1.00 97.88 N
ATOM 17 C5 A B1217 157.551 53.593 -7.436 1.00 94.38 C
ATOM 18 C6 A B1217 157.189 52.477 -6.666 1.00 92.52 C
ATOM 19 N6 A B1217 158.057 51.612 -6.153 1.00 94.35 N
ATOM 20 N1 A B1217 155.879 52.269 -6.446 1.00 90.87 N
ATOM 21 C2 A B1217 155.001 53.116 -6.978 1.00 94.79 C
ATOM 22 N3 A B1217 155.213 54.189 -7.730 1.00 95.57 N
ATOM 23 C4 A B1217 156.526 54.377 -7.926 1.00 95.35 C
ATOM 24 P A B1218 156.600 60.783 -7.172 1.00 96.37 P
ATOM 25 OP1 A B1218 156.161 62.177 -7.460 1.00102.00 O
ATOM 26 OP2 A B1218 158.033 60.509 -6.907 1.00101.46 O
ATOM 27 O5' A B1218 155.772 60.184 -5.941 1.00 99.17 O
TER

Atoms:
C2: (157.927,54.873,-14.533)
OP1: (164.907,60.133,-15.540)
OP2: (164.313,57.787,-14.678)
C4: (159.545,53.201,-14.490)
O5': (162.542,59.328,-15.569)
C3': (160.087,58.703,-14.190)
C1': (158.542,57.202,-15.195)
O4': (159.371,57.715,-16.218)
C5': (161.567,58.556,-16.253)
P: (164.080,58.905,-15.633)
O2: (156.760,55.261,-14.374)
C4': (160.189,58.794,-15.704)
C2': (158.706,58.094,-13.964)
O2': (157.674,59.053,-13.934)
N1: (158.915,55.793,-14.957)
N3: (158.279,53.587,-14.309)
N4: (159.850,51.922,-14.261)
C6: (160.204,55.378,-15.139)
C5: (160.559,54.108,-14.918)
O3': (160.203,60.021,-13.643)
OP1: (159.541,61.567,-11.763)
OP2: (161.548,59.979,-11.547)
C3': (156.755,58.616,-8.623)
C1': (156.434,56.416,-9.437)
C5': (158.747,59.102,-10.138)
O4': (157.367,57.079,-10.288)
C8: (158.481,55.144,-8.550)
O2': (154.510,57.837,-9.177)
C6: (157.189,52.477,-6.666)
C5: (157.551,53.593,-7.436)
C4: (156.526,54.377,-7.926)
P: (160.174,60.251,-12.046)
C4': (157.348,58.513,-10.021)
C2': (155.742,57.479,-8.583)
C2: (155.001,53.116,-6.978)
N1: (155.879,52.269,-6.446)
N3: (155.213,54.189,-7.730)
N6: (158.057,51.612,-6.153)
N7: (158.783,54.090,-7.830)
N9: (157.129,55.368,-8.666)
O5': (159.184,59.117,-11.500)
O3': (156.153,59.883,-8.424)
Image (generated by PyMOL):
PyMOL image
show in jmol