Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0647:0648
Extra
PDB:
ATOM 1 O3' C A 646 28.527 84.547 35.901 1.00 36.02 O
ATOM 2 P A A 647 27.932 83.082 36.236 1.00 35.82 P
ATOM 3 OP1 A A 647 27.400 82.572 34.944 1.00 37.56 O
ATOM 4 OP2 A A 647 27.031 83.173 37.410 1.00 32.42 O
ATOM 5 O5' A A 647 29.201 82.205 36.639 1.00 31.41 O
ATOM 6 C5' A A 647 30.341 82.110 35.767 1.00 31.78 C
ATOM 7 C4' A A 647 31.536 81.571 36.523 1.00 35.54 C
ATOM 8 O4' A A 647 31.798 82.411 37.675 1.00 38.58 O
ATOM 9 C3' A A 647 31.399 80.168 37.089 1.00 35.28 C
ATOM 10 O3' A A 647 31.804 79.243 36.079 1.00 38.73 O
ATOM 11 C2' A A 647 32.388 80.176 38.250 1.00 35.43 C
ATOM 12 O2' A A 647 33.707 79.957 37.803 1.00 34.93 O
ATOM 13 C1' A A 647 32.278 81.620 38.747 1.00 35.43 C
ATOM 14 N9 A A 647 31.409 81.848 39.903 1.00 34.89 N
ATOM 15 C8 A A 647 30.180 82.471 39.918 1.00 34.28 C
ATOM 16 N7 A A 647 29.653 82.569 41.111 1.00 32.70 N
ATOM 17 C5 A A 647 30.589 81.964 41.937 1.00 32.59 C
ATOM 18 C6 A A 647 30.619 81.756 43.318 1.00 33.72 C
ATOM 19 N6 A A 647 29.647 82.161 44.134 1.00 35.98 N
ATOM 20 N1 A A 647 31.691 81.116 43.840 1.00 33.28 N
ATOM 21 C2 A A 647 32.667 80.724 43.009 1.00 34.46 C
ATOM 22 N3 A A 647 32.755 80.871 41.687 1.00 34.98 N
ATOM 23 C4 A A 647 31.670 81.507 41.208 1.00 33.13 C
ATOM 24 P A A 648 31.261 77.725 36.087 1.00 37.08 P
ATOM 25 OP1 A A 648 31.119 77.349 34.646 1.00 40.19 O
ATOM 26 OP2 A A 648 30.084 77.626 36.986 1.00 34.67 O
ATOM 27 O5' A A 648 32.473 76.893 36.704 1.00 32.70 O
TER
ATOM 1 O3' A B 647 31.804 79.243 36.079 1.00 38.73 O
ATOM 2 P A B 648 31.261 77.725 36.087 1.00 37.08 P
ATOM 3 OP1 A B 648 31.119 77.349 34.646 1.00 40.19 O
ATOM 4 OP2 A B 648 30.084 77.626 36.986 1.00 34.67 O
ATOM 5 O5' A B 648 32.473 76.893 36.704 1.00 32.70 O
ATOM 6 C5' A B 648 33.385 76.168 35.860 1.00 34.38 C
ATOM 7 C4' A B 648 34.673 76.943 35.683 1.00 36.74 C
ATOM 8 O4' A B 648 35.217 77.304 36.985 1.00 37.96 O
ATOM 9 C3' A B 648 35.790 76.196 34.953 1.00 37.28 C
ATOM 10 O3' A B 648 36.587 77.100 34.188 1.00 38.54 O
ATOM 11 C2' A B 648 36.631 75.673 36.113 1.00 38.27 C
ATOM 12 O2' A B 648 37.972 75.378 35.778 1.00 38.16 O
ATOM 13 C1' A B 648 36.551 76.855 37.072 1.00 40.04 C
ATOM 14 N9 A B 648 36.872 76.568 38.471 1.00 44.09 N
ATOM 15 C8 A B 648 36.439 75.529 39.255 1.00 46.04 C
ATOM 16 N7 A B 648 36.934 75.540 40.468 1.00 46.92 N
ATOM 17 C5 A B 648 37.748 76.663 40.488 1.00 48.21 C
ATOM 18 C6 A B 648 38.570 77.224 41.488 1.00 48.96 C
ATOM 19 N6 A B 648 38.724 76.696 42.705 1.00 48.69 N
ATOM 20 N1 A B 648 39.241 78.356 41.187 1.00 47.97 N
ATOM 21 C2 A B 648 39.097 78.878 39.964 1.00 48.51 C
ATOM 22 N3 A B 648 38.365 78.442 38.939 1.00 48.43 N
ATOM 23 C4 A B 648 37.708 77.314 39.268 1.00 47.25 C
ATOM 24 P G B 649 35.980 77.807 32.870 1.00 39.30 P
ATOM 25 OP1 G B 649 35.194 76.821 32.082 1.00 41.66 O
ATOM 26 OP2 G B 649 37.100 78.538 32.225 1.00 40.68 O
ATOM 27 O5' G B 649 34.946 78.868 33.451 1.00 37.68 O
TER
ATOM 2 P A A 647 27.932 83.082 36.236 1.00 35.82 P
ATOM 3 OP1 A A 647 27.400 82.572 34.944 1.00 37.56 O
ATOM 4 OP2 A A 647 27.031 83.173 37.410 1.00 32.42 O
ATOM 5 O5' A A 647 29.201 82.205 36.639 1.00 31.41 O
ATOM 6 C5' A A 647 30.341 82.110 35.767 1.00 31.78 C
ATOM 7 C4' A A 647 31.536 81.571 36.523 1.00 35.54 C
ATOM 8 O4' A A 647 31.798 82.411 37.675 1.00 38.58 O
ATOM 9 C3' A A 647 31.399 80.168 37.089 1.00 35.28 C
ATOM 10 O3' A A 647 31.804 79.243 36.079 1.00 38.73 O
ATOM 11 C2' A A 647 32.388 80.176 38.250 1.00 35.43 C
ATOM 12 O2' A A 647 33.707 79.957 37.803 1.00 34.93 O
ATOM 13 C1' A A 647 32.278 81.620 38.747 1.00 35.43 C
ATOM 14 N9 A A 647 31.409 81.848 39.903 1.00 34.89 N
ATOM 15 C8 A A 647 30.180 82.471 39.918 1.00 34.28 C
ATOM 16 N7 A A 647 29.653 82.569 41.111 1.00 32.70 N
ATOM 17 C5 A A 647 30.589 81.964 41.937 1.00 32.59 C
ATOM 18 C6 A A 647 30.619 81.756 43.318 1.00 33.72 C
ATOM 19 N6 A A 647 29.647 82.161 44.134 1.00 35.98 N
ATOM 20 N1 A A 647 31.691 81.116 43.840 1.00 33.28 N
ATOM 21 C2 A A 647 32.667 80.724 43.009 1.00 34.46 C
ATOM 22 N3 A A 647 32.755 80.871 41.687 1.00 34.98 N
ATOM 23 C4 A A 647 31.670 81.507 41.208 1.00 33.13 C
ATOM 24 P A A 648 31.261 77.725 36.087 1.00 37.08 P
ATOM 25 OP1 A A 648 31.119 77.349 34.646 1.00 40.19 O
ATOM 26 OP2 A A 648 30.084 77.626 36.986 1.00 34.67 O
ATOM 27 O5' A A 648 32.473 76.893 36.704 1.00 32.70 O
TER
ATOM 1 O3' A B 647 31.804 79.243 36.079 1.00 38.73 O
ATOM 2 P A B 648 31.261 77.725 36.087 1.00 37.08 P
ATOM 3 OP1 A B 648 31.119 77.349 34.646 1.00 40.19 O
ATOM 4 OP2 A B 648 30.084 77.626 36.986 1.00 34.67 O
ATOM 5 O5' A B 648 32.473 76.893 36.704 1.00 32.70 O
ATOM 6 C5' A B 648 33.385 76.168 35.860 1.00 34.38 C
ATOM 7 C4' A B 648 34.673 76.943 35.683 1.00 36.74 C
ATOM 8 O4' A B 648 35.217 77.304 36.985 1.00 37.96 O
ATOM 9 C3' A B 648 35.790 76.196 34.953 1.00 37.28 C
ATOM 10 O3' A B 648 36.587 77.100 34.188 1.00 38.54 O
ATOM 11 C2' A B 648 36.631 75.673 36.113 1.00 38.27 C
ATOM 12 O2' A B 648 37.972 75.378 35.778 1.00 38.16 O
ATOM 13 C1' A B 648 36.551 76.855 37.072 1.00 40.04 C
ATOM 14 N9 A B 648 36.872 76.568 38.471 1.00 44.09 N
ATOM 15 C8 A B 648 36.439 75.529 39.255 1.00 46.04 C
ATOM 16 N7 A B 648 36.934 75.540 40.468 1.00 46.92 N
ATOM 17 C5 A B 648 37.748 76.663 40.488 1.00 48.21 C
ATOM 18 C6 A B 648 38.570 77.224 41.488 1.00 48.96 C
ATOM 19 N6 A B 648 38.724 76.696 42.705 1.00 48.69 N
ATOM 20 N1 A B 648 39.241 78.356 41.187 1.00 47.97 N
ATOM 21 C2 A B 648 39.097 78.878 39.964 1.00 48.51 C
ATOM 22 N3 A B 648 38.365 78.442 38.939 1.00 48.43 N
ATOM 23 C4 A B 648 37.708 77.314 39.268 1.00 47.25 C
ATOM 24 P G B 649 35.980 77.807 32.870 1.00 39.30 P
ATOM 25 OP1 G B 649 35.194 76.821 32.082 1.00 41.66 O
ATOM 26 OP2 G B 649 37.100 78.538 32.225 1.00 40.68 O
ATOM 27 O5' G B 649 34.946 78.868 33.451 1.00 37.68 O
TER
Atoms:
OP1: (27.400,82.572,34.944)
OP2: (27.031,83.173,37.410)
C3': (31.399,80.168,37.089)
C1': (32.278,81.620,38.747)
C5': (30.341,82.110,35.767)
O4': (31.798,82.411,37.675)
C8: (30.180,82.471,39.918)
O2': (33.707,79.957,37.803)
C6: (30.619,81.756,43.318)
C5: (30.589,81.964,41.937)
C4: (31.670,81.507,41.208)
P: (27.932,83.082,36.236)
C4': (31.536,81.571,36.523)
C2': (32.388,80.176,38.250)
C2: (32.667,80.724,43.009)
N1: (31.691,81.116,43.840)
N3: (32.755,80.871,41.687)
N6: (29.647,82.161,44.134)
N7: (29.653,82.569,41.111)
N9: (31.409,81.848,39.903)
O5': (29.201,82.205,36.639)
O3': (31.804,79.243,36.079)
OP2: (27.031,83.173,37.410)
C3': (31.399,80.168,37.089)
C1': (32.278,81.620,38.747)
C5': (30.341,82.110,35.767)
O4': (31.798,82.411,37.675)
C8: (30.180,82.471,39.918)
O2': (33.707,79.957,37.803)
C6: (30.619,81.756,43.318)
C5: (30.589,81.964,41.937)
C4: (31.670,81.507,41.208)
P: (27.932,83.082,36.236)
C4': (31.536,81.571,36.523)
C2': (32.388,80.176,38.250)
C2: (32.667,80.724,43.009)
N1: (31.691,81.116,43.840)
N3: (32.755,80.871,41.687)
N6: (29.647,82.161,44.134)
N7: (29.653,82.569,41.111)
N9: (31.409,81.848,39.903)
O5': (29.201,82.205,36.639)
O3': (31.804,79.243,36.079)
OP1: (31.119,77.349,34.646)
OP2: (30.084,77.626,36.986)
C3': (35.790,76.196,34.953)
C1': (36.551,76.855,37.072)
C5': (33.385,76.168,35.860)
O4': (35.217,77.304,36.985)
C8: (36.439,75.529,39.255)
O2': (37.972,75.378,35.778)
C6: (38.570,77.224,41.488)
C5: (37.748,76.663,40.488)
C4: (37.708,77.314,39.268)
P: (31.261,77.725,36.087)
C4': (34.673,76.943,35.683)
C2': (36.631,75.673,36.113)
C2: (39.097,78.878,39.964)
N1: (39.241,78.356,41.187)
N3: (38.365,78.442,38.939)
N6: (38.724,76.696,42.705)
N7: (36.934,75.540,40.468)
N9: (36.872,76.568,38.471)
O5': (32.473,76.893,36.704)
O3': (36.587,77.100,34.188)
OP2: (30.084,77.626,36.986)
C3': (35.790,76.196,34.953)
C1': (36.551,76.855,37.072)
C5': (33.385,76.168,35.860)
O4': (35.217,77.304,36.985)
C8: (36.439,75.529,39.255)
O2': (37.972,75.378,35.778)
C6: (38.570,77.224,41.488)
C5: (37.748,76.663,40.488)
C4: (37.708,77.314,39.268)
P: (31.261,77.725,36.087)
C4': (34.673,76.943,35.683)
C2': (36.631,75.673,36.113)
C2: (39.097,78.878,39.964)
N1: (39.241,78.356,41.187)
N3: (38.365,78.442,38.939)
N6: (38.724,76.696,42.705)
N7: (36.934,75.540,40.468)
N9: (36.872,76.568,38.471)
O5': (32.473,76.893,36.704)
O3': (36.587,77.100,34.188)
Image (generated by PyMOL):