Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0685:0686
Extra
PDB:
ATOM 1 O3' C A 684 57.455 61.112 37.075 1.00 50.39 O
ATOM 2 P G A 685 56.100 61.280 36.222 1.00 51.98 P
ATOM 3 OP1 G A 685 55.658 59.906 35.871 1.00 54.90 O
ATOM 4 OP2 G A 685 56.315 62.280 35.143 1.00 50.77 O
ATOM 5 O5' G A 685 55.045 61.897 37.245 1.00 50.51 O
ATOM 6 C5' G A 685 54.676 61.203 38.456 1.00 49.22 C
ATOM 7 C4' G A 685 53.784 62.082 39.305 1.00 49.21 C
ATOM 8 O4' G A 685 54.483 63.324 39.584 1.00 49.13 O
ATOM 9 C3' G A 685 52.470 62.501 38.657 1.00 48.23 C
ATOM 10 O3' G A 685 51.492 61.465 38.862 1.00 48.51 O
ATOM 11 C2' G A 685 52.165 63.837 39.340 1.00 46.63 C
ATOM 12 O2' G A 685 51.572 63.709 40.612 1.00 44.90 O
ATOM 13 C1' G A 685 53.572 64.409 39.541 1.00 47.82 C
ATOM 14 N9 G A 685 54.031 65.356 38.525 1.00 49.05 N
ATOM 15 C8 G A 685 54.918 65.112 37.502 1.00 47.67 C
ATOM 16 N7 G A 685 55.166 66.167 36.776 1.00 47.65 N
ATOM 17 C5 G A 685 54.394 67.170 37.347 1.00 49.13 C
ATOM 18 C6 G A 685 54.257 68.546 36.995 1.00 50.21 C
ATOM 19 O6 G A 685 54.824 69.174 36.086 1.00 50.60 O
ATOM 20 N1 G A 685 53.356 69.202 37.832 1.00 50.13 N
ATOM 21 C2 G A 685 52.682 68.620 38.880 1.00 49.65 C
ATOM 22 N2 G A 685 51.851 69.420 39.571 1.00 45.81 N
ATOM 23 N3 G A 685 52.812 67.346 39.226 1.00 50.31 N
ATOM 24 C4 G A 685 53.677 66.685 38.421 1.00 49.82 C
ATOM 25 P A A 686 49.978 61.637 38.327 1.00 47.79 P
ATOM 26 OP1 A A 686 49.474 60.272 38.059 1.00 51.49 O
ATOM 27 OP2 A A 686 49.904 62.657 37.260 1.00 49.16 O
ATOM 28 O5' A A 686 49.228 62.226 39.597 1.00 49.65 O
TER
ATOM 1 O3' G B 685 51.492 61.465 38.862 1.00 48.51 O
ATOM 2 P A B 686 49.978 61.637 38.327 1.00 47.79 P
ATOM 3 OP1 A B 686 49.474 60.272 38.059 1.00 51.49 O
ATOM 4 OP2 A B 686 49.904 62.657 37.260 1.00 49.16 O
ATOM 5 O5' A B 686 49.228 62.226 39.597 1.00 49.65 O
ATOM 6 C5' A B 686 47.881 61.857 39.935 1.00 49.13 C
ATOM 7 C4' A B 686 47.686 62.002 41.427 1.00 50.29 C
ATOM 8 O4' A B 686 48.126 63.319 41.835 1.00 48.91 O
ATOM 9 C3' A B 686 46.259 61.972 41.945 1.00 49.76 C
ATOM 10 O3' A B 686 45.805 60.625 42.069 1.00 50.84 O
ATOM 11 C2' A B 686 46.396 62.636 43.321 1.00 49.11 C
ATOM 12 O2' A B 686 46.726 61.728 44.352 1.00 49.81 O
ATOM 13 C1' A B 686 47.588 63.584 43.110 1.00 48.09 C
ATOM 14 N9 A B 686 47.325 65.018 43.257 1.00 45.26 N
ATOM 15 C8 A B 686 46.420 65.813 42.596 1.00 44.54 C
ATOM 16 N7 A B 686 46.384 67.049 43.033 1.00 42.98 N
ATOM 17 C5 A B 686 47.342 67.074 44.042 1.00 42.48 C
ATOM 18 C6 A B 686 47.775 68.093 44.924 1.00 39.84 C
ATOM 19 N6 A B 686 47.262 69.324 44.949 1.00 35.60 N
ATOM 20 N1 A B 686 48.759 67.789 45.796 1.00 40.04 N
ATOM 21 C2 A B 686 49.259 66.548 45.793 1.00 41.39 C
ATOM 22 N3 A B 686 48.926 65.507 45.033 1.00 42.92 N
ATOM 23 C4 A B 686 47.948 65.839 44.170 1.00 42.86 C
ATOM 24 P C B 687 44.268 60.261 41.769 1.00 54.22 P
ATOM 25 OP1 C B 687 44.101 58.812 42.045 1.00 55.30 O
ATOM 26 OP2 C B 687 43.903 60.802 40.432 1.00 55.37 O
ATOM 27 O5' C B 687 43.446 61.070 42.864 1.00 54.02 O
TER
ATOM 2 P G A 685 56.100 61.280 36.222 1.00 51.98 P
ATOM 3 OP1 G A 685 55.658 59.906 35.871 1.00 54.90 O
ATOM 4 OP2 G A 685 56.315 62.280 35.143 1.00 50.77 O
ATOM 5 O5' G A 685 55.045 61.897 37.245 1.00 50.51 O
ATOM 6 C5' G A 685 54.676 61.203 38.456 1.00 49.22 C
ATOM 7 C4' G A 685 53.784 62.082 39.305 1.00 49.21 C
ATOM 8 O4' G A 685 54.483 63.324 39.584 1.00 49.13 O
ATOM 9 C3' G A 685 52.470 62.501 38.657 1.00 48.23 C
ATOM 10 O3' G A 685 51.492 61.465 38.862 1.00 48.51 O
ATOM 11 C2' G A 685 52.165 63.837 39.340 1.00 46.63 C
ATOM 12 O2' G A 685 51.572 63.709 40.612 1.00 44.90 O
ATOM 13 C1' G A 685 53.572 64.409 39.541 1.00 47.82 C
ATOM 14 N9 G A 685 54.031 65.356 38.525 1.00 49.05 N
ATOM 15 C8 G A 685 54.918 65.112 37.502 1.00 47.67 C
ATOM 16 N7 G A 685 55.166 66.167 36.776 1.00 47.65 N
ATOM 17 C5 G A 685 54.394 67.170 37.347 1.00 49.13 C
ATOM 18 C6 G A 685 54.257 68.546 36.995 1.00 50.21 C
ATOM 19 O6 G A 685 54.824 69.174 36.086 1.00 50.60 O
ATOM 20 N1 G A 685 53.356 69.202 37.832 1.00 50.13 N
ATOM 21 C2 G A 685 52.682 68.620 38.880 1.00 49.65 C
ATOM 22 N2 G A 685 51.851 69.420 39.571 1.00 45.81 N
ATOM 23 N3 G A 685 52.812 67.346 39.226 1.00 50.31 N
ATOM 24 C4 G A 685 53.677 66.685 38.421 1.00 49.82 C
ATOM 25 P A A 686 49.978 61.637 38.327 1.00 47.79 P
ATOM 26 OP1 A A 686 49.474 60.272 38.059 1.00 51.49 O
ATOM 27 OP2 A A 686 49.904 62.657 37.260 1.00 49.16 O
ATOM 28 O5' A A 686 49.228 62.226 39.597 1.00 49.65 O
TER
ATOM 1 O3' G B 685 51.492 61.465 38.862 1.00 48.51 O
ATOM 2 P A B 686 49.978 61.637 38.327 1.00 47.79 P
ATOM 3 OP1 A B 686 49.474 60.272 38.059 1.00 51.49 O
ATOM 4 OP2 A B 686 49.904 62.657 37.260 1.00 49.16 O
ATOM 5 O5' A B 686 49.228 62.226 39.597 1.00 49.65 O
ATOM 6 C5' A B 686 47.881 61.857 39.935 1.00 49.13 C
ATOM 7 C4' A B 686 47.686 62.002 41.427 1.00 50.29 C
ATOM 8 O4' A B 686 48.126 63.319 41.835 1.00 48.91 O
ATOM 9 C3' A B 686 46.259 61.972 41.945 1.00 49.76 C
ATOM 10 O3' A B 686 45.805 60.625 42.069 1.00 50.84 O
ATOM 11 C2' A B 686 46.396 62.636 43.321 1.00 49.11 C
ATOM 12 O2' A B 686 46.726 61.728 44.352 1.00 49.81 O
ATOM 13 C1' A B 686 47.588 63.584 43.110 1.00 48.09 C
ATOM 14 N9 A B 686 47.325 65.018 43.257 1.00 45.26 N
ATOM 15 C8 A B 686 46.420 65.813 42.596 1.00 44.54 C
ATOM 16 N7 A B 686 46.384 67.049 43.033 1.00 42.98 N
ATOM 17 C5 A B 686 47.342 67.074 44.042 1.00 42.48 C
ATOM 18 C6 A B 686 47.775 68.093 44.924 1.00 39.84 C
ATOM 19 N6 A B 686 47.262 69.324 44.949 1.00 35.60 N
ATOM 20 N1 A B 686 48.759 67.789 45.796 1.00 40.04 N
ATOM 21 C2 A B 686 49.259 66.548 45.793 1.00 41.39 C
ATOM 22 N3 A B 686 48.926 65.507 45.033 1.00 42.92 N
ATOM 23 C4 A B 686 47.948 65.839 44.170 1.00 42.86 C
ATOM 24 P C B 687 44.268 60.261 41.769 1.00 54.22 P
ATOM 25 OP1 C B 687 44.101 58.812 42.045 1.00 55.30 O
ATOM 26 OP2 C B 687 43.903 60.802 40.432 1.00 55.37 O
ATOM 27 O5' C B 687 43.446 61.070 42.864 1.00 54.02 O
TER
Atoms:
OP1: (55.658,59.906,35.871)
OP2: (56.315,62.280,35.143)
C3': (52.470,62.501,38.657)
C1': (53.572,64.409,39.541)
C5': (54.676,61.203,38.456)
O6: (54.824,69.174,36.086)
O4': (54.483,63.324,39.584)
C8: (54.918,65.112,37.502)
C2: (52.682,68.620,38.880)
C6: (54.257,68.546,36.995)
C5: (54.394,67.170,37.347)
C4: (53.677,66.685,38.421)
P: (56.100,61.280,36.222)
C4': (53.784,62.082,39.305)
C2': (52.165,63.837,39.340)
O2': (51.572,63.709,40.612)
N1: (53.356,69.202,37.832)
N2: (51.851,69.420,39.571)
N3: (52.812,67.346,39.226)
N7: (55.166,66.167,36.776)
N9: (54.031,65.356,38.525)
O5': (55.045,61.897,37.245)
O3': (51.492,61.465,38.862)
OP2: (56.315,62.280,35.143)
C3': (52.470,62.501,38.657)
C1': (53.572,64.409,39.541)
C5': (54.676,61.203,38.456)
O6: (54.824,69.174,36.086)
O4': (54.483,63.324,39.584)
C8: (54.918,65.112,37.502)
C2: (52.682,68.620,38.880)
C6: (54.257,68.546,36.995)
C5: (54.394,67.170,37.347)
C4: (53.677,66.685,38.421)
P: (56.100,61.280,36.222)
C4': (53.784,62.082,39.305)
C2': (52.165,63.837,39.340)
O2': (51.572,63.709,40.612)
N1: (53.356,69.202,37.832)
N2: (51.851,69.420,39.571)
N3: (52.812,67.346,39.226)
N7: (55.166,66.167,36.776)
N9: (54.031,65.356,38.525)
O5': (55.045,61.897,37.245)
O3': (51.492,61.465,38.862)
OP1: (49.474,60.272,38.059)
OP2: (49.904,62.657,37.260)
C3': (46.259,61.972,41.945)
C1': (47.588,63.584,43.110)
C5': (47.881,61.857,39.935)
O4': (48.126,63.319,41.835)
C8: (46.420,65.813,42.596)
O2': (46.726,61.728,44.352)
C6: (47.775,68.093,44.924)
C5: (47.342,67.074,44.042)
C4: (47.948,65.839,44.170)
P: (49.978,61.637,38.327)
C4': (47.686,62.002,41.427)
C2': (46.396,62.636,43.321)
C2: (49.259,66.548,45.793)
N1: (48.759,67.789,45.796)
N3: (48.926,65.507,45.033)
N6: (47.262,69.324,44.949)
N7: (46.384,67.049,43.033)
N9: (47.325,65.018,43.257)
O5': (49.228,62.226,39.597)
O3': (45.805,60.625,42.069)
OP2: (49.904,62.657,37.260)
C3': (46.259,61.972,41.945)
C1': (47.588,63.584,43.110)
C5': (47.881,61.857,39.935)
O4': (48.126,63.319,41.835)
C8: (46.420,65.813,42.596)
O2': (46.726,61.728,44.352)
C6: (47.775,68.093,44.924)
C5: (47.342,67.074,44.042)
C4: (47.948,65.839,44.170)
P: (49.978,61.637,38.327)
C4': (47.686,62.002,41.427)
C2': (46.396,62.636,43.321)
C2: (49.259,66.548,45.793)
N1: (48.759,67.789,45.796)
N3: (48.926,65.507,45.033)
N6: (47.262,69.324,44.949)
N7: (46.384,67.049,43.033)
N9: (47.325,65.018,43.257)
O5': (49.228,62.226,39.597)
O3': (45.805,60.625,42.069)
Image (generated by PyMOL):