Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:0685:0686
Extra
PDB:
ATOM 1 O3' C A 684 57.433 61.009 37.168 1.00 52.18 O
ATOM 2 P G A 685 56.108 61.151 36.272 1.00 52.58 P
ATOM 3 OP1 G A 685 55.710 59.778 35.890 1.00 54.44 O
ATOM 4 OP2 G A 685 56.352 62.165 35.214 1.00 51.61 O
ATOM 5 O5' G A 685 55.004 61.731 37.263 1.00 51.33 O
ATOM 6 C5' G A 685 54.633 61.033 38.472 1.00 49.96 C
ATOM 7 C4' G A 685 53.778 61.927 39.344 1.00 49.41 C
ATOM 8 O4' G A 685 54.517 63.148 39.608 1.00 48.85 O
ATOM 9 C3' G A 685 52.458 62.385 38.732 1.00 48.57 C
ATOM 10 O3' G A 685 51.440 61.401 38.983 1.00 49.25 O
ATOM 11 C2' G A 685 52.210 63.725 39.425 1.00 46.61 C
ATOM 12 O2' G A 685 51.644 63.593 40.707 1.00 45.71 O
ATOM 13 C1' G A 685 53.637 64.258 39.596 1.00 46.92 C
ATOM 14 N9 G A 685 54.098 65.203 38.579 1.00 47.45 N
ATOM 15 C8 G A 685 54.974 64.959 37.544 1.00 45.31 C
ATOM 16 N7 G A 685 55.211 66.013 36.813 1.00 43.70 N
ATOM 17 C5 G A 685 54.445 67.015 37.393 1.00 45.81 C
ATOM 18 C6 G A 685 54.295 68.387 37.040 1.00 45.76 C
ATOM 19 O6 G A 685 54.841 69.013 36.124 1.00 47.15 O
ATOM 20 N1 G A 685 53.408 69.041 37.891 1.00 45.37 N
ATOM 21 C2 G A 685 52.758 68.461 38.954 1.00 45.58 C
ATOM 22 N2 G A 685 51.939 69.255 39.658 1.00 42.65 N
ATOM 23 N3 G A 685 52.899 67.192 39.302 1.00 47.49 N
ATOM 24 C4 G A 685 53.748 66.531 38.481 1.00 47.34 C
ATOM 25 P A A 686 49.985 61.522 38.291 1.00 51.02 P
ATOM 26 OP1 A A 686 49.458 60.142 38.176 1.00 53.52 O
ATOM 27 OP2 A A 686 50.063 62.368 37.077 1.00 51.86 O
ATOM 28 O5' A A 686 49.116 62.301 39.377 1.00 50.52 O
TER
ATOM 1 O3' G B 685 51.440 61.401 38.983 1.00 49.25 O
ATOM 2 P A B 686 49.985 61.522 38.291 1.00 51.02 P
ATOM 3 OP1 A B 686 49.458 60.142 38.176 1.00 53.52 O
ATOM 4 OP2 A B 686 50.063 62.368 37.077 1.00 51.86 O
ATOM 5 O5' A B 686 49.116 62.301 39.377 1.00 50.52 O
ATOM 6 C5' A B 686 47.817 61.827 39.804 1.00 49.78 C
ATOM 7 C4' A B 686 47.714 61.903 41.313 1.00 50.91 C
ATOM 8 O4' A B 686 48.168 63.202 41.756 1.00 50.09 O
ATOM 9 C3' A B 686 46.319 61.825 41.920 1.00 51.06 C
ATOM 10 O3' A B 686 45.893 60.464 42.040 1.00 52.69 O
ATOM 11 C2' A B 686 46.533 62.435 43.310 1.00 50.97 C
ATOM 12 O2' A B 686 46.945 61.484 44.269 1.00 50.17 O
ATOM 13 C1' A B 686 47.689 63.419 43.065 1.00 50.15 C
ATOM 14 N9 A B 686 47.401 64.845 43.256 1.00 48.97 N
ATOM 15 C8 A B 686 46.458 65.628 42.632 1.00 48.38 C
ATOM 16 N7 A B 686 46.422 66.864 43.070 1.00 48.03 N
ATOM 17 C5 A B 686 47.416 66.905 44.042 1.00 47.73 C
ATOM 18 C6 A B 686 47.878 67.937 44.895 1.00 45.71 C
ATOM 19 N6 A B 686 47.364 69.171 44.919 1.00 44.15 N
ATOM 20 N1 A B 686 48.894 67.648 45.736 1.00 43.77 N
ATOM 21 C2 A B 686 49.403 66.412 45.724 1.00 45.12 C
ATOM 22 N3 A B 686 49.053 65.360 44.984 1.00 47.32 N
ATOM 23 C4 A B 686 48.040 65.674 44.154 1.00 48.08 C
ATOM 24 P C B 687 44.379 60.054 41.684 1.00 53.69 P
ATOM 25 OP1 C B 687 44.324 58.570 41.646 1.00 54.66 O
ATOM 26 OP2 C B 687 43.958 60.832 40.487 1.00 55.36 O
ATOM 27 O5' C B 687 43.516 60.546 42.929 1.00 52.52 O
TER
ATOM 2 P G A 685 56.108 61.151 36.272 1.00 52.58 P
ATOM 3 OP1 G A 685 55.710 59.778 35.890 1.00 54.44 O
ATOM 4 OP2 G A 685 56.352 62.165 35.214 1.00 51.61 O
ATOM 5 O5' G A 685 55.004 61.731 37.263 1.00 51.33 O
ATOM 6 C5' G A 685 54.633 61.033 38.472 1.00 49.96 C
ATOM 7 C4' G A 685 53.778 61.927 39.344 1.00 49.41 C
ATOM 8 O4' G A 685 54.517 63.148 39.608 1.00 48.85 O
ATOM 9 C3' G A 685 52.458 62.385 38.732 1.00 48.57 C
ATOM 10 O3' G A 685 51.440 61.401 38.983 1.00 49.25 O
ATOM 11 C2' G A 685 52.210 63.725 39.425 1.00 46.61 C
ATOM 12 O2' G A 685 51.644 63.593 40.707 1.00 45.71 O
ATOM 13 C1' G A 685 53.637 64.258 39.596 1.00 46.92 C
ATOM 14 N9 G A 685 54.098 65.203 38.579 1.00 47.45 N
ATOM 15 C8 G A 685 54.974 64.959 37.544 1.00 45.31 C
ATOM 16 N7 G A 685 55.211 66.013 36.813 1.00 43.70 N
ATOM 17 C5 G A 685 54.445 67.015 37.393 1.00 45.81 C
ATOM 18 C6 G A 685 54.295 68.387 37.040 1.00 45.76 C
ATOM 19 O6 G A 685 54.841 69.013 36.124 1.00 47.15 O
ATOM 20 N1 G A 685 53.408 69.041 37.891 1.00 45.37 N
ATOM 21 C2 G A 685 52.758 68.461 38.954 1.00 45.58 C
ATOM 22 N2 G A 685 51.939 69.255 39.658 1.00 42.65 N
ATOM 23 N3 G A 685 52.899 67.192 39.302 1.00 47.49 N
ATOM 24 C4 G A 685 53.748 66.531 38.481 1.00 47.34 C
ATOM 25 P A A 686 49.985 61.522 38.291 1.00 51.02 P
ATOM 26 OP1 A A 686 49.458 60.142 38.176 1.00 53.52 O
ATOM 27 OP2 A A 686 50.063 62.368 37.077 1.00 51.86 O
ATOM 28 O5' A A 686 49.116 62.301 39.377 1.00 50.52 O
TER
ATOM 1 O3' G B 685 51.440 61.401 38.983 1.00 49.25 O
ATOM 2 P A B 686 49.985 61.522 38.291 1.00 51.02 P
ATOM 3 OP1 A B 686 49.458 60.142 38.176 1.00 53.52 O
ATOM 4 OP2 A B 686 50.063 62.368 37.077 1.00 51.86 O
ATOM 5 O5' A B 686 49.116 62.301 39.377 1.00 50.52 O
ATOM 6 C5' A B 686 47.817 61.827 39.804 1.00 49.78 C
ATOM 7 C4' A B 686 47.714 61.903 41.313 1.00 50.91 C
ATOM 8 O4' A B 686 48.168 63.202 41.756 1.00 50.09 O
ATOM 9 C3' A B 686 46.319 61.825 41.920 1.00 51.06 C
ATOM 10 O3' A B 686 45.893 60.464 42.040 1.00 52.69 O
ATOM 11 C2' A B 686 46.533 62.435 43.310 1.00 50.97 C
ATOM 12 O2' A B 686 46.945 61.484 44.269 1.00 50.17 O
ATOM 13 C1' A B 686 47.689 63.419 43.065 1.00 50.15 C
ATOM 14 N9 A B 686 47.401 64.845 43.256 1.00 48.97 N
ATOM 15 C8 A B 686 46.458 65.628 42.632 1.00 48.38 C
ATOM 16 N7 A B 686 46.422 66.864 43.070 1.00 48.03 N
ATOM 17 C5 A B 686 47.416 66.905 44.042 1.00 47.73 C
ATOM 18 C6 A B 686 47.878 67.937 44.895 1.00 45.71 C
ATOM 19 N6 A B 686 47.364 69.171 44.919 1.00 44.15 N
ATOM 20 N1 A B 686 48.894 67.648 45.736 1.00 43.77 N
ATOM 21 C2 A B 686 49.403 66.412 45.724 1.00 45.12 C
ATOM 22 N3 A B 686 49.053 65.360 44.984 1.00 47.32 N
ATOM 23 C4 A B 686 48.040 65.674 44.154 1.00 48.08 C
ATOM 24 P C B 687 44.379 60.054 41.684 1.00 53.69 P
ATOM 25 OP1 C B 687 44.324 58.570 41.646 1.00 54.66 O
ATOM 26 OP2 C B 687 43.958 60.832 40.487 1.00 55.36 O
ATOM 27 O5' C B 687 43.516 60.546 42.929 1.00 52.52 O
TER
Atoms:
OP1: (55.710,59.778,35.890)
OP2: (56.352,62.165,35.214)
C3': (52.458,62.385,38.732)
C1': (53.637,64.258,39.596)
C5': (54.633,61.033,38.472)
O6: (54.841,69.013,36.124)
O4': (54.517,63.148,39.608)
C8: (54.974,64.959,37.544)
C2: (52.758,68.461,38.954)
C6: (54.295,68.387,37.040)
C5: (54.445,67.015,37.393)
C4: (53.748,66.531,38.481)
P: (56.108,61.151,36.272)
C4': (53.778,61.927,39.344)
C2': (52.210,63.725,39.425)
O2': (51.644,63.593,40.707)
N1: (53.408,69.041,37.891)
N2: (51.939,69.255,39.658)
N3: (52.899,67.192,39.302)
N7: (55.211,66.013,36.813)
N9: (54.098,65.203,38.579)
O5': (55.004,61.731,37.263)
O3': (51.440,61.401,38.983)
OP2: (56.352,62.165,35.214)
C3': (52.458,62.385,38.732)
C1': (53.637,64.258,39.596)
C5': (54.633,61.033,38.472)
O6: (54.841,69.013,36.124)
O4': (54.517,63.148,39.608)
C8: (54.974,64.959,37.544)
C2: (52.758,68.461,38.954)
C6: (54.295,68.387,37.040)
C5: (54.445,67.015,37.393)
C4: (53.748,66.531,38.481)
P: (56.108,61.151,36.272)
C4': (53.778,61.927,39.344)
C2': (52.210,63.725,39.425)
O2': (51.644,63.593,40.707)
N1: (53.408,69.041,37.891)
N2: (51.939,69.255,39.658)
N3: (52.899,67.192,39.302)
N7: (55.211,66.013,36.813)
N9: (54.098,65.203,38.579)
O5': (55.004,61.731,37.263)
O3': (51.440,61.401,38.983)
OP1: (49.458,60.142,38.176)
OP2: (50.063,62.368,37.077)
C3': (46.319,61.825,41.920)
C1': (47.689,63.419,43.065)
C5': (47.817,61.827,39.804)
O4': (48.168,63.202,41.756)
C8: (46.458,65.628,42.632)
O2': (46.945,61.484,44.269)
C6: (47.878,67.937,44.895)
C5: (47.416,66.905,44.042)
C4: (48.040,65.674,44.154)
P: (49.985,61.522,38.291)
C4': (47.714,61.903,41.313)
C2': (46.533,62.435,43.310)
C2: (49.403,66.412,45.724)
N1: (48.894,67.648,45.736)
N3: (49.053,65.360,44.984)
N6: (47.364,69.171,44.919)
N7: (46.422,66.864,43.070)
N9: (47.401,64.845,43.256)
O5': (49.116,62.301,39.377)
O3': (45.893,60.464,42.040)
OP2: (50.063,62.368,37.077)
C3': (46.319,61.825,41.920)
C1': (47.689,63.419,43.065)
C5': (47.817,61.827,39.804)
O4': (48.168,63.202,41.756)
C8: (46.458,65.628,42.632)
O2': (46.945,61.484,44.269)
C6: (47.878,67.937,44.895)
C5: (47.416,66.905,44.042)
C4: (48.040,65.674,44.154)
P: (49.985,61.522,38.291)
C4': (47.714,61.903,41.313)
C2': (46.533,62.435,43.310)
C2: (49.403,66.412,45.724)
N1: (48.894,67.648,45.736)
N3: (49.053,65.360,44.984)
N6: (47.364,69.171,44.919)
N7: (46.422,66.864,43.070)
N9: (47.401,64.845,43.256)
O5': (49.116,62.301,39.377)
O3': (45.893,60.464,42.040)
Image (generated by PyMOL):