Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:1177:1233
Extra
PDB:
ATOM 1 O3' C A 176 84.092 -21.217 125.941 1.00104.55 O
ATOM 2 P C A 177 84.627 -19.867 125.244 1.00114.49 P
ATOM 3 OP1 C A 177 84.134 -19.864 123.850 1.00113.81 O
ATOM 4 OP2 C A 177 86.097 -19.799 125.479 1.00114.94 O
ATOM 5 O5' C A 177 83.888 -18.730 126.078 1.00114.58 O
ATOM 6 C5' C A 177 82.502 -18.484 125.911 1.00114.18 C
ATOM 7 C4' C A 177 82.039 -17.354 126.791 1.00114.38 C
ATOM 8 O4' C A 177 82.362 -17.658 128.175 1.00115.04 O
ATOM 9 C3' C A 177 82.698 -15.998 126.551 1.00114.37 C
ATOM 10 O3' C A 177 82.130 -15.283 125.466 1.00113.77 O
ATOM 11 C2' C A 177 82.514 -15.308 127.895 1.00114.86 C
ATOM 12 O2' C A 177 81.174 -14.845 128.039 1.00114.60 O
ATOM 13 C1' C A 177 82.724 -16.475 128.861 1.00115.37 C
ATOM 14 N1 C A 177 84.146 -16.591 129.309 1.00115.90 N
ATOM 15 C2 C A 177 84.588 -15.831 130.400 1.00116.45 C
ATOM 16 O2 C A 177 83.801 -15.081 130.981 1.00116.49 O
ATOM 17 N3 C A 177 85.866 -15.923 130.818 1.00116.95 N
ATOM 18 C4 C A 177 86.703 -16.734 130.185 1.00116.92 C
ATOM 19 N4 C A 177 87.958 -16.793 130.624 1.00117.43 N
ATOM 20 C5 C A 177 86.298 -17.520 129.071 1.00116.37 C
ATOM 21 C6 C A 177 85.028 -17.420 128.672 1.00115.88 C
ATOM 22 P U A 178 83.035 -14.302 124.560 1.00 99.24 P
ATOM 23 OP1 U A 178 82.209 -13.898 123.400 1.00 98.58 O
ATOM 24 OP2 U A 178 84.321 -14.997 124.308 1.00 99.46 O
ATOM 25 O5' U A 178 83.277 -13.047 125.512 1.00 99.65 O
TER
ATOM 1 O3' A B 232 92.436 -8.808 137.729 1.00 93.19 O
ATOM 2 P G B 233 91.838 -10.002 138.640 1.00101.73 P
ATOM 3 OP1 G B 233 92.123 -9.639 140.064 1.00102.53 O
ATOM 4 OP2 G B 233 92.362 -11.288 138.104 1.00101.62 O
ATOM 5 O5' G B 233 90.280 -9.924 138.351 1.00101.16 O
ATOM 6 C5' G B 233 89.620 -8.682 138.287 1.00100.95 C
ATOM 7 C4' G B 233 88.321 -8.810 137.555 1.00100.25 C
ATOM 8 O4' G B 233 88.573 -9.055 136.152 1.00 99.63 O
ATOM 9 C3' G B 233 87.439 -9.976 137.965 1.00100.21 C
ATOM 10 O3' G B 233 86.734 -9.739 139.177 1.00100.63 O
ATOM 11 C2' G B 233 86.538 -10.138 136.745 1.00 99.39 C
ATOM 12 O2' G B 233 85.526 -9.142 136.741 1.00 99.14 O
ATOM 13 C1' G B 233 87.522 -9.835 135.607 1.00 99.09 C
ATOM 14 N9 G B 233 88.102 -11.061 135.015 1.00 98.97 N
ATOM 15 C8 G B 233 89.374 -11.538 135.252 1.00 99.42 C
ATOM 16 N7 G B 233 89.648 -12.637 134.599 1.00 99.20 N
ATOM 17 C5 G B 233 88.488 -12.906 133.872 1.00 98.56 C
ATOM 18 C6 G B 233 88.193 -13.982 132.981 1.00 98.09 C
ATOM 19 O6 G B 233 88.905 -14.936 132.639 1.00 98.15 O
ATOM 20 N1 G B 233 86.914 -13.892 132.461 1.00 97.52 N
ATOM 21 C2 G B 233 86.027 -12.898 132.753 1.00 97.41 C
ATOM 22 N2 G B 233 84.853 -13.028 132.124 1.00 96.84 N
ATOM 23 N3 G B 233 86.271 -11.880 133.580 1.00 97.84 N
ATOM 24 C4 G B 233 87.522 -11.940 134.108 1.00 98.40 C
ATOM 25 P G B 234 86.106 -10.962 140.016 1.00102.56 P
ATOM 26 OP1 G B 234 85.619 -10.403 141.303 1.00103.09 O
ATOM 27 OP2 G B 234 87.121 -12.055 140.049 1.00102.84 O
ATOM 28 O5' G B 234 84.867 -11.391 139.110 1.00101.80 O
TER
ATOM 2 P C A 177 84.627 -19.867 125.244 1.00114.49 P
ATOM 3 OP1 C A 177 84.134 -19.864 123.850 1.00113.81 O
ATOM 4 OP2 C A 177 86.097 -19.799 125.479 1.00114.94 O
ATOM 5 O5' C A 177 83.888 -18.730 126.078 1.00114.58 O
ATOM 6 C5' C A 177 82.502 -18.484 125.911 1.00114.18 C
ATOM 7 C4' C A 177 82.039 -17.354 126.791 1.00114.38 C
ATOM 8 O4' C A 177 82.362 -17.658 128.175 1.00115.04 O
ATOM 9 C3' C A 177 82.698 -15.998 126.551 1.00114.37 C
ATOM 10 O3' C A 177 82.130 -15.283 125.466 1.00113.77 O
ATOM 11 C2' C A 177 82.514 -15.308 127.895 1.00114.86 C
ATOM 12 O2' C A 177 81.174 -14.845 128.039 1.00114.60 O
ATOM 13 C1' C A 177 82.724 -16.475 128.861 1.00115.37 C
ATOM 14 N1 C A 177 84.146 -16.591 129.309 1.00115.90 N
ATOM 15 C2 C A 177 84.588 -15.831 130.400 1.00116.45 C
ATOM 16 O2 C A 177 83.801 -15.081 130.981 1.00116.49 O
ATOM 17 N3 C A 177 85.866 -15.923 130.818 1.00116.95 N
ATOM 18 C4 C A 177 86.703 -16.734 130.185 1.00116.92 C
ATOM 19 N4 C A 177 87.958 -16.793 130.624 1.00117.43 N
ATOM 20 C5 C A 177 86.298 -17.520 129.071 1.00116.37 C
ATOM 21 C6 C A 177 85.028 -17.420 128.672 1.00115.88 C
ATOM 22 P U A 178 83.035 -14.302 124.560 1.00 99.24 P
ATOM 23 OP1 U A 178 82.209 -13.898 123.400 1.00 98.58 O
ATOM 24 OP2 U A 178 84.321 -14.997 124.308 1.00 99.46 O
ATOM 25 O5' U A 178 83.277 -13.047 125.512 1.00 99.65 O
TER
ATOM 1 O3' A B 232 92.436 -8.808 137.729 1.00 93.19 O
ATOM 2 P G B 233 91.838 -10.002 138.640 1.00101.73 P
ATOM 3 OP1 G B 233 92.123 -9.639 140.064 1.00102.53 O
ATOM 4 OP2 G B 233 92.362 -11.288 138.104 1.00101.62 O
ATOM 5 O5' G B 233 90.280 -9.924 138.351 1.00101.16 O
ATOM 6 C5' G B 233 89.620 -8.682 138.287 1.00100.95 C
ATOM 7 C4' G B 233 88.321 -8.810 137.555 1.00100.25 C
ATOM 8 O4' G B 233 88.573 -9.055 136.152 1.00 99.63 O
ATOM 9 C3' G B 233 87.439 -9.976 137.965 1.00100.21 C
ATOM 10 O3' G B 233 86.734 -9.739 139.177 1.00100.63 O
ATOM 11 C2' G B 233 86.538 -10.138 136.745 1.00 99.39 C
ATOM 12 O2' G B 233 85.526 -9.142 136.741 1.00 99.14 O
ATOM 13 C1' G B 233 87.522 -9.835 135.607 1.00 99.09 C
ATOM 14 N9 G B 233 88.102 -11.061 135.015 1.00 98.97 N
ATOM 15 C8 G B 233 89.374 -11.538 135.252 1.00 99.42 C
ATOM 16 N7 G B 233 89.648 -12.637 134.599 1.00 99.20 N
ATOM 17 C5 G B 233 88.488 -12.906 133.872 1.00 98.56 C
ATOM 18 C6 G B 233 88.193 -13.982 132.981 1.00 98.09 C
ATOM 19 O6 G B 233 88.905 -14.936 132.639 1.00 98.15 O
ATOM 20 N1 G B 233 86.914 -13.892 132.461 1.00 97.52 N
ATOM 21 C2 G B 233 86.027 -12.898 132.753 1.00 97.41 C
ATOM 22 N2 G B 233 84.853 -13.028 132.124 1.00 96.84 N
ATOM 23 N3 G B 233 86.271 -11.880 133.580 1.00 97.84 N
ATOM 24 C4 G B 233 87.522 -11.940 134.108 1.00 98.40 C
ATOM 25 P G B 234 86.106 -10.962 140.016 1.00102.56 P
ATOM 26 OP1 G B 234 85.619 -10.403 141.303 1.00103.09 O
ATOM 27 OP2 G B 234 87.121 -12.055 140.049 1.00102.84 O
ATOM 28 O5' G B 234 84.867 -11.391 139.110 1.00101.80 O
TER
Atoms:
C2: (84.588,-15.831,130.400)
OP1: (84.134,-19.864,123.850)
OP2: (86.097,-19.799,125.479)
C4: (86.703,-16.734,130.185)
O5': (83.888,-18.730,126.078)
C3': (82.698,-15.998,126.551)
C1': (82.724,-16.475,128.861)
O4': (82.362,-17.658,128.175)
C5': (82.502,-18.484,125.911)
P: (84.627,-19.867,125.244)
O2: (83.801,-15.081,130.981)
C4': (82.039,-17.354,126.791)
C2': (82.514,-15.308,127.895)
O2': (81.174,-14.845,128.039)
N1: (84.146,-16.591,129.309)
N3: (85.866,-15.923,130.818)
N4: (87.958,-16.793,130.624)
C6: (85.028,-17.420,128.672)
C5: (86.298,-17.520,129.071)
O3': (82.130,-15.283,125.466)
OP1: (84.134,-19.864,123.850)
OP2: (86.097,-19.799,125.479)
C4: (86.703,-16.734,130.185)
O5': (83.888,-18.730,126.078)
C3': (82.698,-15.998,126.551)
C1': (82.724,-16.475,128.861)
O4': (82.362,-17.658,128.175)
C5': (82.502,-18.484,125.911)
P: (84.627,-19.867,125.244)
O2: (83.801,-15.081,130.981)
C4': (82.039,-17.354,126.791)
C2': (82.514,-15.308,127.895)
O2': (81.174,-14.845,128.039)
N1: (84.146,-16.591,129.309)
N3: (85.866,-15.923,130.818)
N4: (87.958,-16.793,130.624)
C6: (85.028,-17.420,128.672)
C5: (86.298,-17.520,129.071)
O3': (82.130,-15.283,125.466)
OP1: (92.123,-9.639,140.064)
OP2: (92.362,-11.288,138.104)
C3': (87.439,-9.976,137.965)
C1': (87.522,-9.835,135.607)
C5': (89.620,-8.682,138.287)
O6: (88.905,-14.936,132.639)
O4': (88.573,-9.055,136.152)
C8: (89.374,-11.538,135.252)
C2: (86.027,-12.898,132.753)
C6: (88.193,-13.982,132.981)
C5: (88.488,-12.906,133.872)
C4: (87.522,-11.940,134.108)
P: (91.838,-10.002,138.640)
C4': (88.321,-8.810,137.555)
C2': (86.538,-10.138,136.745)
O2': (85.526,-9.142,136.741)
N1: (86.914,-13.892,132.461)
N2: (84.853,-13.028,132.124)
N3: (86.271,-11.880,133.580)
N7: (89.648,-12.637,134.599)
N9: (88.102,-11.061,135.015)
O5': (90.280,-9.924,138.351)
O3': (86.734,-9.739,139.177)
OP2: (92.362,-11.288,138.104)
C3': (87.439,-9.976,137.965)
C1': (87.522,-9.835,135.607)
C5': (89.620,-8.682,138.287)
O6: (88.905,-14.936,132.639)
O4': (88.573,-9.055,136.152)
C8: (89.374,-11.538,135.252)
C2: (86.027,-12.898,132.753)
C6: (88.193,-13.982,132.981)
C5: (88.488,-12.906,133.872)
C4: (87.522,-11.940,134.108)
P: (91.838,-10.002,138.640)
C4': (88.321,-8.810,137.555)
C2': (86.538,-10.138,136.745)
O2': (85.526,-9.142,136.741)
N1: (86.914,-13.892,132.461)
N2: (84.853,-13.028,132.124)
N3: (86.271,-11.880,133.580)
N7: (89.648,-12.637,134.599)
N9: (88.102,-11.061,135.015)
O5': (90.280,-9.924,138.351)
O3': (86.734,-9.739,139.177)
Image (generated by PyMOL):