Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0685:0686
Extra
PDB:
ATOM 1 O3' C A 684 57.693 61.297 37.424 1.00 60.53 O
ATOM 2 P G A 685 56.340 61.430 36.563 1.00 59.67 P
ATOM 3 OP1 G A 685 55.907 60.043 36.268 1.00 61.12 O
ATOM 4 OP2 G A 685 56.566 62.381 35.448 1.00 59.97 O
ATOM 5 O5' G A 685 55.285 62.077 37.567 1.00 59.36 O
ATOM 6 C5' G A 685 54.896 61.388 38.778 1.00 60.11 C
ATOM 7 C4' G A 685 53.982 62.259 39.602 1.00 59.78 C
ATOM 8 O4' G A 685 54.659 63.510 39.854 1.00 60.18 O
ATOM 9 C3' G A 685 52.662 62.640 38.947 1.00 60.19 C
ATOM 10 O3' G A 685 51.709 61.601 39.228 1.00 60.85 O
ATOM 11 C2' G A 685 52.339 63.984 39.599 1.00 60.27 C
ATOM 12 O2' G A 685 51.766 63.856 40.881 1.00 60.97 O
ATOM 13 C1' G A 685 53.737 64.580 39.792 1.00 60.58 C
ATOM 14 N9 G A 685 54.209 65.528 38.786 1.00 62.33 N
ATOM 15 C8 G A 685 55.165 65.303 37.820 1.00 61.69 C
ATOM 16 N7 G A 685 55.427 66.359 37.103 1.00 61.08 N
ATOM 17 C5 G A 685 54.588 67.340 37.613 1.00 62.63 C
ATOM 18 C6 G A 685 54.435 68.704 37.243 1.00 63.68 C
ATOM 19 O6 G A 685 55.055 69.346 36.385 1.00 65.57 O
ATOM 20 N1 G A 685 53.454 69.334 38.002 1.00 63.65 N
ATOM 21 C2 G A 685 52.729 68.743 39.006 1.00 63.69 C
ATOM 22 N2 G A 685 51.818 69.528 39.621 1.00 60.14 N
ATOM 23 N3 G A 685 52.880 67.476 39.379 1.00 63.92 N
ATOM 24 C4 G A 685 53.816 66.839 38.641 1.00 62.56 C
ATOM 25 P A A 686 50.213 61.653 38.617 1.00 62.25 P
ATOM 26 OP1 A A 686 49.696 60.264 38.719 1.00 63.06 O
ATOM 27 OP2 A A 686 50.193 62.348 37.302 1.00 62.19 O
ATOM 28 O5' A A 686 49.396 62.535 39.661 1.00 62.19 O
TER
ATOM 1 O3' G B 685 51.709 61.601 39.228 1.00 60.85 O
ATOM 2 P A B 686 50.213 61.653 38.617 1.00 62.25 P
ATOM 3 OP1 A B 686 49.696 60.264 38.719 1.00 63.06 O
ATOM 4 OP2 A B 686 50.193 62.348 37.302 1.00 62.19 O
ATOM 5 O5' A B 686 49.396 62.535 39.661 1.00 62.19 O
ATOM 6 C5' A B 686 48.087 62.141 40.116 1.00 62.24 C
ATOM 7 C4' A B 686 48.031 62.167 41.627 1.00 63.55 C
ATOM 8 O4' A B 686 48.453 63.466 42.106 1.00 63.40 O
ATOM 9 C3' A B 686 46.641 62.035 42.226 1.00 64.02 C
ATOM 10 O3' A B 686 46.270 60.656 42.278 1.00 66.77 O
ATOM 11 C2' A B 686 46.817 62.632 43.628 1.00 63.09 C
ATOM 12 O2' A B 686 47.253 61.697 44.591 1.00 63.43 O
ATOM 13 C1' A B 686 47.939 63.659 43.409 1.00 61.91 C
ATOM 14 N9 A B 686 47.608 65.078 43.602 1.00 60.01 N
ATOM 15 C8 A B 686 46.639 65.829 42.976 1.00 60.23 C
ATOM 16 N7 A B 686 46.580 67.073 43.394 1.00 58.81 N
ATOM 17 C5 A B 686 47.581 67.150 44.356 1.00 57.19 C
ATOM 18 C6 A B 686 48.024 68.199 45.176 1.00 54.79 C
ATOM 19 N6 A B 686 47.493 69.425 45.165 1.00 53.81 N
ATOM 20 N1 A B 686 49.043 67.945 46.018 1.00 52.12 N
ATOM 21 C2 A B 686 49.576 66.725 46.030 1.00 51.20 C
ATOM 22 N3 A B 686 49.251 65.659 45.317 1.00 54.09 N
ATOM 23 C4 A B 686 48.229 65.935 44.487 1.00 57.52 C
ATOM 24 P C B 687 44.756 60.215 41.970 1.00 68.40 P
ATOM 25 OP1 C B 687 44.684 58.732 42.060 1.00 69.65 O
ATOM 26 OP2 C B 687 44.320 60.892 40.723 1.00 68.95 O
ATOM 27 O5' C B 687 43.924 60.817 43.187 1.00 68.76 O
TER
ATOM 2 P G A 685 56.340 61.430 36.563 1.00 59.67 P
ATOM 3 OP1 G A 685 55.907 60.043 36.268 1.00 61.12 O
ATOM 4 OP2 G A 685 56.566 62.381 35.448 1.00 59.97 O
ATOM 5 O5' G A 685 55.285 62.077 37.567 1.00 59.36 O
ATOM 6 C5' G A 685 54.896 61.388 38.778 1.00 60.11 C
ATOM 7 C4' G A 685 53.982 62.259 39.602 1.00 59.78 C
ATOM 8 O4' G A 685 54.659 63.510 39.854 1.00 60.18 O
ATOM 9 C3' G A 685 52.662 62.640 38.947 1.00 60.19 C
ATOM 10 O3' G A 685 51.709 61.601 39.228 1.00 60.85 O
ATOM 11 C2' G A 685 52.339 63.984 39.599 1.00 60.27 C
ATOM 12 O2' G A 685 51.766 63.856 40.881 1.00 60.97 O
ATOM 13 C1' G A 685 53.737 64.580 39.792 1.00 60.58 C
ATOM 14 N9 G A 685 54.209 65.528 38.786 1.00 62.33 N
ATOM 15 C8 G A 685 55.165 65.303 37.820 1.00 61.69 C
ATOM 16 N7 G A 685 55.427 66.359 37.103 1.00 61.08 N
ATOM 17 C5 G A 685 54.588 67.340 37.613 1.00 62.63 C
ATOM 18 C6 G A 685 54.435 68.704 37.243 1.00 63.68 C
ATOM 19 O6 G A 685 55.055 69.346 36.385 1.00 65.57 O
ATOM 20 N1 G A 685 53.454 69.334 38.002 1.00 63.65 N
ATOM 21 C2 G A 685 52.729 68.743 39.006 1.00 63.69 C
ATOM 22 N2 G A 685 51.818 69.528 39.621 1.00 60.14 N
ATOM 23 N3 G A 685 52.880 67.476 39.379 1.00 63.92 N
ATOM 24 C4 G A 685 53.816 66.839 38.641 1.00 62.56 C
ATOM 25 P A A 686 50.213 61.653 38.617 1.00 62.25 P
ATOM 26 OP1 A A 686 49.696 60.264 38.719 1.00 63.06 O
ATOM 27 OP2 A A 686 50.193 62.348 37.302 1.00 62.19 O
ATOM 28 O5' A A 686 49.396 62.535 39.661 1.00 62.19 O
TER
ATOM 1 O3' G B 685 51.709 61.601 39.228 1.00 60.85 O
ATOM 2 P A B 686 50.213 61.653 38.617 1.00 62.25 P
ATOM 3 OP1 A B 686 49.696 60.264 38.719 1.00 63.06 O
ATOM 4 OP2 A B 686 50.193 62.348 37.302 1.00 62.19 O
ATOM 5 O5' A B 686 49.396 62.535 39.661 1.00 62.19 O
ATOM 6 C5' A B 686 48.087 62.141 40.116 1.00 62.24 C
ATOM 7 C4' A B 686 48.031 62.167 41.627 1.00 63.55 C
ATOM 8 O4' A B 686 48.453 63.466 42.106 1.00 63.40 O
ATOM 9 C3' A B 686 46.641 62.035 42.226 1.00 64.02 C
ATOM 10 O3' A B 686 46.270 60.656 42.278 1.00 66.77 O
ATOM 11 C2' A B 686 46.817 62.632 43.628 1.00 63.09 C
ATOM 12 O2' A B 686 47.253 61.697 44.591 1.00 63.43 O
ATOM 13 C1' A B 686 47.939 63.659 43.409 1.00 61.91 C
ATOM 14 N9 A B 686 47.608 65.078 43.602 1.00 60.01 N
ATOM 15 C8 A B 686 46.639 65.829 42.976 1.00 60.23 C
ATOM 16 N7 A B 686 46.580 67.073 43.394 1.00 58.81 N
ATOM 17 C5 A B 686 47.581 67.150 44.356 1.00 57.19 C
ATOM 18 C6 A B 686 48.024 68.199 45.176 1.00 54.79 C
ATOM 19 N6 A B 686 47.493 69.425 45.165 1.00 53.81 N
ATOM 20 N1 A B 686 49.043 67.945 46.018 1.00 52.12 N
ATOM 21 C2 A B 686 49.576 66.725 46.030 1.00 51.20 C
ATOM 22 N3 A B 686 49.251 65.659 45.317 1.00 54.09 N
ATOM 23 C4 A B 686 48.229 65.935 44.487 1.00 57.52 C
ATOM 24 P C B 687 44.756 60.215 41.970 1.00 68.40 P
ATOM 25 OP1 C B 687 44.684 58.732 42.060 1.00 69.65 O
ATOM 26 OP2 C B 687 44.320 60.892 40.723 1.00 68.95 O
ATOM 27 O5' C B 687 43.924 60.817 43.187 1.00 68.76 O
TER
Atoms:
OP1: (55.907,60.043,36.268)
OP2: (56.566,62.381,35.448)
C3': (52.662,62.640,38.947)
C1': (53.737,64.580,39.792)
C5': (54.896,61.388,38.778)
O6: (55.055,69.346,36.385)
O4': (54.659,63.510,39.854)
C8: (55.165,65.303,37.820)
C2: (52.729,68.743,39.006)
C6: (54.435,68.704,37.243)
C5: (54.588,67.340,37.613)
C4: (53.816,66.839,38.641)
P: (56.340,61.430,36.563)
C4': (53.982,62.259,39.602)
C2': (52.339,63.984,39.599)
O2': (51.766,63.856,40.881)
N1: (53.454,69.334,38.002)
N2: (51.818,69.528,39.621)
N3: (52.880,67.476,39.379)
N7: (55.427,66.359,37.103)
N9: (54.209,65.528,38.786)
O5': (55.285,62.077,37.567)
O3': (51.709,61.601,39.228)
OP2: (56.566,62.381,35.448)
C3': (52.662,62.640,38.947)
C1': (53.737,64.580,39.792)
C5': (54.896,61.388,38.778)
O6: (55.055,69.346,36.385)
O4': (54.659,63.510,39.854)
C8: (55.165,65.303,37.820)
C2: (52.729,68.743,39.006)
C6: (54.435,68.704,37.243)
C5: (54.588,67.340,37.613)
C4: (53.816,66.839,38.641)
P: (56.340,61.430,36.563)
C4': (53.982,62.259,39.602)
C2': (52.339,63.984,39.599)
O2': (51.766,63.856,40.881)
N1: (53.454,69.334,38.002)
N2: (51.818,69.528,39.621)
N3: (52.880,67.476,39.379)
N7: (55.427,66.359,37.103)
N9: (54.209,65.528,38.786)
O5': (55.285,62.077,37.567)
O3': (51.709,61.601,39.228)
OP1: (49.696,60.264,38.719)
OP2: (50.193,62.348,37.302)
C3': (46.641,62.035,42.226)
C1': (47.939,63.659,43.409)
C5': (48.087,62.141,40.116)
O4': (48.453,63.466,42.106)
C8: (46.639,65.829,42.976)
O2': (47.253,61.697,44.591)
C6: (48.024,68.199,45.176)
C5: (47.581,67.150,44.356)
C4: (48.229,65.935,44.487)
P: (50.213,61.653,38.617)
C4': (48.031,62.167,41.627)
C2': (46.817,62.632,43.628)
C2: (49.576,66.725,46.030)
N1: (49.043,67.945,46.018)
N3: (49.251,65.659,45.317)
N6: (47.493,69.425,45.165)
N7: (46.580,67.073,43.394)
N9: (47.608,65.078,43.602)
O5': (49.396,62.535,39.661)
O3': (46.270,60.656,42.278)
OP2: (50.193,62.348,37.302)
C3': (46.641,62.035,42.226)
C1': (47.939,63.659,43.409)
C5': (48.087,62.141,40.116)
O4': (48.453,63.466,42.106)
C8: (46.639,65.829,42.976)
O2': (47.253,61.697,44.591)
C6: (48.024,68.199,45.176)
C5: (47.581,67.150,44.356)
C4: (48.229,65.935,44.487)
P: (50.213,61.653,38.617)
C4': (48.031,62.167,41.627)
C2': (46.817,62.632,43.628)
C2: (49.576,66.725,46.030)
N1: (49.043,67.945,46.018)
N3: (49.251,65.659,45.317)
N6: (47.493,69.425,45.165)
N7: (46.580,67.073,43.394)
N9: (47.608,65.078,43.602)
O5': (49.396,62.535,39.661)
O3': (46.270,60.656,42.278)
Image (generated by PyMOL):