Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0647:0648
Extra
PDB:
ATOM 1 O3' C A 646 28.573 84.544 35.850 1.00 39.64 O
ATOM 2 P A A 647 28.012 83.068 36.199 1.00 39.76 P
ATOM 3 OP1 A A 647 27.572 82.486 34.909 1.00 41.28 O
ATOM 4 OP2 A A 647 27.047 83.151 37.327 1.00 36.13 O
ATOM 5 O5' A A 647 29.313 82.269 36.659 1.00 35.95 O
ATOM 6 C5' A A 647 30.425 82.116 35.756 1.00 36.09 C
ATOM 7 C4' A A 647 31.613 81.550 36.480 1.00 37.82 C
ATOM 8 O4' A A 647 31.884 82.371 37.637 1.00 38.01 O
ATOM 9 C3' A A 647 31.446 80.142 37.028 1.00 39.03 C
ATOM 10 O3' A A 647 31.785 79.217 35.990 1.00 42.31 O
ATOM 11 C2' A A 647 32.431 80.118 38.196 1.00 37.49 C
ATOM 12 O2' A A 647 33.761 79.890 37.784 1.00 36.80 O
ATOM 13 C1' A A 647 32.338 81.559 38.702 1.00 36.75 C
ATOM 14 N9 A A 647 31.460 81.788 39.846 1.00 35.85 N
ATOM 15 C8 A A 647 30.246 82.436 39.875 1.00 34.23 C
ATOM 16 N7 A A 647 29.728 82.534 41.073 1.00 32.50 N
ATOM 17 C5 A A 647 30.654 81.903 41.884 1.00 33.65 C
ATOM 18 C6 A A 647 30.698 81.697 43.259 1.00 34.65 C
ATOM 19 N6 A A 647 29.757 82.139 44.088 1.00 37.57 N
ATOM 20 N1 A A 647 31.758 81.025 43.767 1.00 35.64 N
ATOM 21 C2 A A 647 32.711 80.603 42.922 1.00 37.21 C
ATOM 22 N3 A A 647 32.787 80.749 41.599 1.00 36.51 N
ATOM 23 C4 A A 647 31.716 81.420 41.140 1.00 35.36 C
ATOM 24 P A A 648 31.309 77.682 36.072 1.00 43.14 P
ATOM 25 OP1 A A 648 31.106 77.237 34.667 1.00 45.00 O
ATOM 26 OP2 A A 648 30.194 77.568 37.041 1.00 42.08 O
ATOM 27 O5' A A 648 32.583 76.917 36.655 1.00 42.58 O
TER
ATOM 1 O3' A B 647 31.785 79.217 35.990 1.00 42.31 O
ATOM 2 P A B 648 31.309 77.682 36.072 1.00 43.14 P
ATOM 3 OP1 A B 648 31.106 77.237 34.667 1.00 45.00 O
ATOM 4 OP2 A B 648 30.194 77.568 37.041 1.00 42.08 O
ATOM 5 O5' A B 648 32.583 76.917 36.655 1.00 42.58 O
ATOM 6 C5' A B 648 33.486 76.186 35.799 1.00 40.24 C
ATOM 7 C4' A B 648 34.778 76.949 35.635 1.00 42.44 C
ATOM 8 O4' A B 648 35.300 77.321 36.940 1.00 43.02 O
ATOM 9 C3' A B 648 35.908 76.212 34.914 1.00 43.21 C
ATOM 10 O3' A B 648 36.693 77.119 34.145 1.00 44.37 O
ATOM 11 C2' A B 648 36.773 75.730 36.070 1.00 44.09 C
ATOM 12 O2' A B 648 38.124 75.523 35.698 1.00 44.53 O
ATOM 13 C1' A B 648 36.642 76.904 37.036 1.00 45.59 C
ATOM 14 N9 A B 648 36.947 76.588 38.430 1.00 49.28 N
ATOM 15 C8 A B 648 36.537 75.508 39.164 1.00 50.70 C
ATOM 16 N7 A B 648 37.016 75.484 40.382 1.00 52.85 N
ATOM 17 C5 A B 648 37.793 76.630 40.459 1.00 54.40 C
ATOM 18 C6 A B 648 38.584 77.173 41.492 1.00 56.08 C
ATOM 19 N6 A B 648 38.742 76.590 42.686 1.00 57.90 N
ATOM 20 N1 A B 648 39.221 78.342 41.249 1.00 55.23 N
ATOM 21 C2 A B 648 39.078 78.909 40.049 1.00 54.27 C
ATOM 22 N3 A B 648 38.375 78.492 38.998 1.00 54.48 N
ATOM 23 C4 A B 648 37.748 77.330 39.271 1.00 53.10 C
ATOM 24 P G B 649 36.077 77.803 32.828 1.00 46.51 P
ATOM 25 OP1 G B 649 35.403 76.752 32.019 1.00 47.10 O
ATOM 26 OP2 G B 649 37.157 78.619 32.223 1.00 47.04 O
ATOM 27 O5' G B 649 34.959 78.784 33.394 1.00 43.92 O
TER
ATOM 2 P A A 647 28.012 83.068 36.199 1.00 39.76 P
ATOM 3 OP1 A A 647 27.572 82.486 34.909 1.00 41.28 O
ATOM 4 OP2 A A 647 27.047 83.151 37.327 1.00 36.13 O
ATOM 5 O5' A A 647 29.313 82.269 36.659 1.00 35.95 O
ATOM 6 C5' A A 647 30.425 82.116 35.756 1.00 36.09 C
ATOM 7 C4' A A 647 31.613 81.550 36.480 1.00 37.82 C
ATOM 8 O4' A A 647 31.884 82.371 37.637 1.00 38.01 O
ATOM 9 C3' A A 647 31.446 80.142 37.028 1.00 39.03 C
ATOM 10 O3' A A 647 31.785 79.217 35.990 1.00 42.31 O
ATOM 11 C2' A A 647 32.431 80.118 38.196 1.00 37.49 C
ATOM 12 O2' A A 647 33.761 79.890 37.784 1.00 36.80 O
ATOM 13 C1' A A 647 32.338 81.559 38.702 1.00 36.75 C
ATOM 14 N9 A A 647 31.460 81.788 39.846 1.00 35.85 N
ATOM 15 C8 A A 647 30.246 82.436 39.875 1.00 34.23 C
ATOM 16 N7 A A 647 29.728 82.534 41.073 1.00 32.50 N
ATOM 17 C5 A A 647 30.654 81.903 41.884 1.00 33.65 C
ATOM 18 C6 A A 647 30.698 81.697 43.259 1.00 34.65 C
ATOM 19 N6 A A 647 29.757 82.139 44.088 1.00 37.57 N
ATOM 20 N1 A A 647 31.758 81.025 43.767 1.00 35.64 N
ATOM 21 C2 A A 647 32.711 80.603 42.922 1.00 37.21 C
ATOM 22 N3 A A 647 32.787 80.749 41.599 1.00 36.51 N
ATOM 23 C4 A A 647 31.716 81.420 41.140 1.00 35.36 C
ATOM 24 P A A 648 31.309 77.682 36.072 1.00 43.14 P
ATOM 25 OP1 A A 648 31.106 77.237 34.667 1.00 45.00 O
ATOM 26 OP2 A A 648 30.194 77.568 37.041 1.00 42.08 O
ATOM 27 O5' A A 648 32.583 76.917 36.655 1.00 42.58 O
TER
ATOM 1 O3' A B 647 31.785 79.217 35.990 1.00 42.31 O
ATOM 2 P A B 648 31.309 77.682 36.072 1.00 43.14 P
ATOM 3 OP1 A B 648 31.106 77.237 34.667 1.00 45.00 O
ATOM 4 OP2 A B 648 30.194 77.568 37.041 1.00 42.08 O
ATOM 5 O5' A B 648 32.583 76.917 36.655 1.00 42.58 O
ATOM 6 C5' A B 648 33.486 76.186 35.799 1.00 40.24 C
ATOM 7 C4' A B 648 34.778 76.949 35.635 1.00 42.44 C
ATOM 8 O4' A B 648 35.300 77.321 36.940 1.00 43.02 O
ATOM 9 C3' A B 648 35.908 76.212 34.914 1.00 43.21 C
ATOM 10 O3' A B 648 36.693 77.119 34.145 1.00 44.37 O
ATOM 11 C2' A B 648 36.773 75.730 36.070 1.00 44.09 C
ATOM 12 O2' A B 648 38.124 75.523 35.698 1.00 44.53 O
ATOM 13 C1' A B 648 36.642 76.904 37.036 1.00 45.59 C
ATOM 14 N9 A B 648 36.947 76.588 38.430 1.00 49.28 N
ATOM 15 C8 A B 648 36.537 75.508 39.164 1.00 50.70 C
ATOM 16 N7 A B 648 37.016 75.484 40.382 1.00 52.85 N
ATOM 17 C5 A B 648 37.793 76.630 40.459 1.00 54.40 C
ATOM 18 C6 A B 648 38.584 77.173 41.492 1.00 56.08 C
ATOM 19 N6 A B 648 38.742 76.590 42.686 1.00 57.90 N
ATOM 20 N1 A B 648 39.221 78.342 41.249 1.00 55.23 N
ATOM 21 C2 A B 648 39.078 78.909 40.049 1.00 54.27 C
ATOM 22 N3 A B 648 38.375 78.492 38.998 1.00 54.48 N
ATOM 23 C4 A B 648 37.748 77.330 39.271 1.00 53.10 C
ATOM 24 P G B 649 36.077 77.803 32.828 1.00 46.51 P
ATOM 25 OP1 G B 649 35.403 76.752 32.019 1.00 47.10 O
ATOM 26 OP2 G B 649 37.157 78.619 32.223 1.00 47.04 O
ATOM 27 O5' G B 649 34.959 78.784 33.394 1.00 43.92 O
TER
Atoms:
OP1: (27.572,82.486,34.909)
OP2: (27.047,83.151,37.327)
C3': (31.446,80.142,37.028)
C1': (32.338,81.559,38.702)
C5': (30.425,82.116,35.756)
O4': (31.884,82.371,37.637)
C8: (30.246,82.436,39.875)
O2': (33.761,79.890,37.784)
C6: (30.698,81.697,43.259)
C5: (30.654,81.903,41.884)
C4: (31.716,81.420,41.140)
P: (28.012,83.068,36.199)
C4': (31.613,81.550,36.480)
C2': (32.431,80.118,38.196)
C2: (32.711,80.603,42.922)
N1: (31.758,81.025,43.767)
N3: (32.787,80.749,41.599)
N6: (29.757,82.139,44.088)
N7: (29.728,82.534,41.073)
N9: (31.460,81.788,39.846)
O5': (29.313,82.269,36.659)
O3': (31.785,79.217,35.990)
OP2: (27.047,83.151,37.327)
C3': (31.446,80.142,37.028)
C1': (32.338,81.559,38.702)
C5': (30.425,82.116,35.756)
O4': (31.884,82.371,37.637)
C8: (30.246,82.436,39.875)
O2': (33.761,79.890,37.784)
C6: (30.698,81.697,43.259)
C5: (30.654,81.903,41.884)
C4: (31.716,81.420,41.140)
P: (28.012,83.068,36.199)
C4': (31.613,81.550,36.480)
C2': (32.431,80.118,38.196)
C2: (32.711,80.603,42.922)
N1: (31.758,81.025,43.767)
N3: (32.787,80.749,41.599)
N6: (29.757,82.139,44.088)
N7: (29.728,82.534,41.073)
N9: (31.460,81.788,39.846)
O5': (29.313,82.269,36.659)
O3': (31.785,79.217,35.990)
OP1: (31.106,77.237,34.667)
OP2: (30.194,77.568,37.041)
C3': (35.908,76.212,34.914)
C1': (36.642,76.904,37.036)
C5': (33.486,76.186,35.799)
O4': (35.300,77.321,36.940)
C8: (36.537,75.508,39.164)
O2': (38.124,75.523,35.698)
C6: (38.584,77.173,41.492)
C5: (37.793,76.630,40.459)
C4: (37.748,77.330,39.271)
P: (31.309,77.682,36.072)
C4': (34.778,76.949,35.635)
C2': (36.773,75.730,36.070)
C2: (39.078,78.909,40.049)
N1: (39.221,78.342,41.249)
N3: (38.375,78.492,38.998)
N6: (38.742,76.590,42.686)
N7: (37.016,75.484,40.382)
N9: (36.947,76.588,38.430)
O5': (32.583,76.917,36.655)
O3': (36.693,77.119,34.145)
OP2: (30.194,77.568,37.041)
C3': (35.908,76.212,34.914)
C1': (36.642,76.904,37.036)
C5': (33.486,76.186,35.799)
O4': (35.300,77.321,36.940)
C8: (36.537,75.508,39.164)
O2': (38.124,75.523,35.698)
C6: (38.584,77.173,41.492)
C5: (37.793,76.630,40.459)
C4: (37.748,77.330,39.271)
P: (31.309,77.682,36.072)
C4': (34.778,76.949,35.635)
C2': (36.773,75.730,36.070)
C2: (39.078,78.909,40.049)
N1: (39.221,78.342,41.249)
N3: (38.375,78.492,38.998)
N6: (38.742,76.590,42.686)
N7: (37.016,75.484,40.382)
N9: (36.947,76.588,38.430)
O5': (32.583,76.917,36.655)
O3': (36.693,77.119,34.145)
Image (generated by PyMOL):